Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10725

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,268,014	+		DZA65_RS10715	0.68	+1.0
2,268,014	+		DZA65_RS10715	0.68	+0.3
2,268,082	+		DZA65_RS10715	0.83	+0.6
2,268,109	-		DZA65_RS10715	0.89	-0.4
2,268,110	+		DZA65_RS10715	0.90	+1.0
2,268,128	+				+0.6
2,268,183	+				-2.6
2,268,184	-				+1.0
2,268,224	-				+0.2
2,268,239	+				-0.1
2,268,275	-				+0.0
2,268,310	+				+0.4
2,268,313	+				+0.6
2,268,313	+				+0.7
2,268,313	+				+1.3
2,268,314	-				-0.1
2,268,317	+				-1.6
2,268,318	-				-1.0
2,268,318	-				-0.3
2,268,405	+				-0.6
2,268,405	+				-0.4
2,268,406	-				+0.6
2,268,406	-				-0.3
2,268,406	-				+0.2
2,268,406	-				-1.1
2,268,406	-				+0.2
2,268,406	-				-0.5
2,268,410	+				-0.9
2,268,411	-				-0.9
2,268,411	-				-0.2
2,268,421	-				+0.3
2,268,426	+				+0.1
2,268,426	+				+1.2
2,268,426	+				+1.4
2,268,437	-				-1.6
2,268,437	-				+0.6
2,268,463	+				+0.0
2,268,463	+				-1.0
2,268,463	+				+1.2
2,268,464	-				+0.1
2,268,464	-				+1.1
2,268,464	-				-0.7
2,268,465	+				+0.8
2,268,465	+				-1.4
2,268,465	+				-1.0
2,268,465	+				-0.3
2,268,466	-				-0.7
2,268,466	-				+1.9
2,268,466	-				-0.9
2,268,466	-				+0.3
2,268,466	-				-0.6
2,268,466	-				+1.6
2,268,466	-				-1.7
2,268,573	+		DZA65_RS10720	0.35	-0.7
2,268,574	-		DZA65_RS10720	0.35	-0.5
2,268,585	-		DZA65_RS10720	0.39	+0.6
2,268,585	-		DZA65_RS10720	0.39	+0.9
2,268,627	+		DZA65_RS10720	0.56	-0.6
2,268,628	-		DZA65_RS10720	0.57	-0.9
2,268,660	+		DZA65_RS10720	0.69	-1.4
2,268,661	-		DZA65_RS10720	0.70	-0.4
2,268,661	-		DZA65_RS10720	0.70	-0.5
2,268,661	-		DZA65_RS10720	0.70	+1.6
2,268,663	+		DZA65_RS10720	0.71	+0.5
2,268,716	-				-0.4
2,268,762	+				+1.6
2,268,762	+				-1.4
2,268,762	+				-1.7
2,268,763	-				+0.2
2,268,763	-				+1.1
2,268,763	-				-0.7
2,268,998	+				+1.3
2,268,998	+				-0.1
2,268,998	+				+1.6
2,268,998	+				-1.6
2,268,999	-				-1.7
2,269,048	-				-0.5
2,269,048	-				-2.6
2,269,065	+				+0.2
2,269,065	+				+1.6
2,269,066	-				-1.2
2,269,066	-				-0.7
2,269,109	+				-1.9
2,269,144	-		DZA65_RS10725	0.12	-0.1
2,269,154	+		DZA65_RS10725	0.12	+0.3
2,269,154	+		DZA65_RS10725	0.12	-1.8
2,269,155	-		DZA65_RS10725	0.12	-1.6
2,269,155	-		DZA65_RS10725	0.12	+0.8
2,269,160	+		DZA65_RS10725	0.13	-0.7
2,269,160	+		DZA65_RS10725	0.13	-1.4
2,269,160	+		DZA65_RS10725	0.13	+0.0
2,269,160	+		DZA65_RS10725	0.13	+0.3
2,269,161	-		DZA65_RS10725	0.13	+0.6
2,269,163	+		DZA65_RS10725	0.13	-1.4
2,269,163	+		DZA65_RS10725	0.13	-0.7
2,269,257	-		DZA65_RS10725	0.20	-0.9
2,269,261	-		DZA65_RS10725	0.21	-1.9
2,269,281	-		DZA65_RS10725	0.22	-0.4
2,269,281	-		DZA65_RS10725	0.22	-1.4
2,269,352	+		DZA65_RS10725	0.28	+0.6
2,269,403	+		DZA65_RS10725	0.32	-1.5
2,269,403	+		DZA65_RS10725	0.32	-0.6
2,269,403	+		DZA65_RS10725	0.32	+1.6
2,269,403	+		DZA65_RS10725	0.32	-0.6
2,269,403	+		DZA65_RS10725	0.32	-2.2
2,269,403	+		DZA65_RS10725	0.32	-0.3
2,269,403	+		DZA65_RS10725	0.32	-0.1
2,269,403	+		DZA65_RS10725	0.32	-0.1
2,269,403	+		DZA65_RS10725	0.32	+1.9
2,269,403	+		DZA65_RS10725	0.32	-0.4
2,269,403	+		DZA65_RS10725	0.32	-0.3
2,269,403	+		DZA65_RS10725	0.32	+0.8
2,269,404	-		DZA65_RS10725	0.32	+1.6
2,269,404	-		DZA65_RS10725	0.32	-1.2
2,269,404	-		DZA65_RS10725	0.32	-1.0
2,269,404	-		DZA65_RS10725	0.32	-0.1
2,269,404	-		DZA65_RS10725	0.32	+0.7
2,269,404	-		DZA65_RS10725	0.32	-0.3
2,269,404	-		DZA65_RS10725	0.32	-0.5
2,269,404	-		DZA65_RS10725	0.32	+1.2
2,269,404	-		DZA65_RS10725	0.32	-0.4
2,269,404	-		DZA65_RS10725	0.32	-0.2
2,269,424	+		DZA65_RS10725	0.33	-0.6
2,269,445	+		DZA65_RS10725	0.35	-1.7
2,269,445	+		DZA65_RS10725	0.35	+0.0
2,269,445	+		DZA65_RS10725	0.35	-0.4
2,269,445	+		DZA65_RS10725	0.35	-0.2
2,269,445	+		DZA65_RS10725	0.35	+0.9
2,269,445	+		DZA65_RS10725	0.35	-1.4
2,269,445	+		DZA65_RS10725	0.35	-1.7
2,269,445	+		DZA65_RS10725	0.35	+0.1
2,269,446	-		DZA65_RS10725	0.35	-1.1
2,269,446	-		DZA65_RS10725	0.35	-0.1
2,269,446	-		DZA65_RS10725	0.35	-1.6
2,269,457	+		DZA65_RS10725	0.36	+1.1
2,269,457	+		DZA65_RS10725	0.36	-0.2
2,269,457	+		DZA65_RS10725	0.36	-0.5
2,269,458	-				-0.4
2,269,559	+		DZA65_RS10725	0.44	-1.4
2,269,568	+		DZA65_RS10725	0.45	-0.2
2,269,568	+		DZA65_RS10725	0.45	-1.4
2,269,690	+		DZA65_RS10725	0.54	-1.0
2,269,777	+		DZA65_RS10725	0.61	-1.1
2,269,778	-		DZA65_RS10725	0.61	+0.2
2,269,783	-		DZA65_RS10725	0.62	-0.3
2,269,785	+		DZA65_RS10725	0.62	-0.3
2,269,785	+		DZA65_RS10725	0.62	-0.6
2,269,785	+		DZA65_RS10725	0.62	-0.9
2,269,812	-		DZA65_RS10725	0.64	-0.6
2,269,832	+		DZA65_RS10725	0.65	+0.6
2,269,905	-		DZA65_RS10725	0.71	-0.7
2,269,905	-		DZA65_RS10725	0.71	+0.4
2,270,047	+		DZA65_RS10725	0.82	+0.0
2,270,047	+		DZA65_RS10725	0.82	+0.6
2,270,048	-		DZA65_RS10725	0.82	-0.7
2,270,048	-		DZA65_RS10725	0.82	-1.5
2,270,048	-		DZA65_RS10725	0.82	+0.9
2,270,048	-		DZA65_RS10725	0.82	-0.4
2,270,113	-		DZA65_RS10725	0.88	-0.7
2,270,118	+		DZA65_RS10725	0.88	-0.4
2,270,118	+		DZA65_RS10725	0.88	-0.2
2,270,118	+		DZA65_RS10725	0.88	-0.7
2,270,118	+		DZA65_RS10725	0.88	-2.6
2,270,118	+		DZA65_RS10725	0.88	+0.1
2,270,118	+		DZA65_RS10725	0.88	-0.4
2,270,119	-		DZA65_RS10725	0.88	+0.2
2,270,182	+				-1.4
2,270,182	+				+0.6
2,270,182	+				+0.6
2,270,183	-				-0.7
2,270,195	+				+0.1
2,270,196	-				-0.8
2,270,264	+				-1.6
2,270,265	-				+0.0
2,270,289	+				+1.2
2,270,289	+				-0.4
2,270,289	+				-0.1
2,270,289	+				+0.4
2,270,289	+				+1.1
2,270,290	-				-0.4
2,270,290	-				-0.1
2,270,290	-				-2.0
2,270,290	-				-2.0
2,270,301	+				-0.2
2,270,301	+				-0.2
2,270,301	+				-0.2
2,270,301	+				-0.3
2,270,301	+				+0.6
2,270,302	-				-1.1
2,270,302	-				-0.8
2,270,302	-				-0.1
2,270,333	+				+0.6
2,270,333	+				-0.4
2,270,334	-				-0.6
2,270,334	-				-0.5
2,270,334	-				+0.3
2,270,334	-				+0.6
2,270,499	+				+0.7
2,270,513	+		DZA65_RS10730	0.11	-1.0
2,270,608	-		DZA65_RS10730	0.16	-0.1
2,270,717	+		DZA65_RS10730	0.21	+0.2
2,270,717	+		DZA65_RS10730	0.21	-0.4
2,270,726	+		DZA65_RS10730	0.22	-1.9
2,270,726	+		DZA65_RS10730	0.22	+0.6
2,270,760	-		DZA65_RS10730	0.23	+0.6
2,270,760	-		DZA65_RS10730	0.23	-0.2
2,270,771	+		DZA65_RS10730	0.24	+0.1
2,270,796	+		DZA65_RS10730	0.25	-1.2
2,270,807	+		DZA65_RS10730	0.26	-2.0
2,270,822	+		DZA65_RS10730	0.27	+0.0
2,270,900	+		DZA65_RS10730	0.31	-1.1
2,270,900	+		DZA65_RS10730	0.31	+0.6
2,270,900	+		DZA65_RS10730	0.31	+0.9
2,271,017	+		DZA65_RS10730	0.37	-0.4
2,271,080	+		DZA65_RS10730	0.40	+0.0
2,271,080	+		DZA65_RS10730	0.40	-1.4
2,271,080	+		DZA65_RS10730	0.40	-2.6
2,271,080	+		DZA65_RS10730	0.40	-0.4
2,271,080	+		DZA65_RS10730	0.40	+0.2
2,271,080	+		DZA65_RS10730	0.40	-1.0
2,271,080	+		DZA65_RS10730	0.40	+1.1
2,271,080	+		DZA65_RS10730	0.40	+2.3
2,271,080	+		DZA65_RS10730	0.40	-0.8
2,271,081	-		DZA65_RS10730	0.40	-1.7
2,271,081	-		DZA65_RS10730	0.40	+0.1
2,271,081	-		DZA65_RS10730	0.40	-1.6
2,271,081	-		DZA65_RS10730	0.40	+0.9
2,271,099	-		DZA65_RS10730	0.41	-0.1
2,271,099	-		DZA65_RS10730	0.41	-0.2
2,271,099	-		DZA65_RS10730	0.41	+0.6
2,271,102	+		DZA65_RS10730	0.41	-0.3
2,271,251	+		DZA65_RS10730	0.49	-2.1
2,271,252	-		DZA65_RS10730	0.49	-0.1
2,271,269	+		DZA65_RS10730	0.50	-0.4
2,271,269	+		DZA65_RS10730	0.50	-0.1
2,271,269	+		DZA65_RS10730	0.50	+0.4
2,271,269	+		DZA65_RS10730	0.50	+2.1
2,271,269	+		DZA65_RS10730	0.50	-1.6
2,271,269	+		DZA65_RS10730	0.50	-0.8
2,271,269	+		DZA65_RS10730	0.50	-1.4