Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10205

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,156,929	+				-1.5
2,156,950	+				-0.7
2,156,951	-				-0.2
2,156,951	-				-2.1
2,156,967	+				+0.1
2,156,967	+				-2.8
2,156,967	+				-1.2
2,156,968	-				+0.5
2,156,988	-				-0.5
2,156,991	-				-0.5
2,157,004	+				-0.1
2,157,004	+				-1.7
2,157,005	-				-0.4
2,157,030	-				+0.8
2,157,074	+				-0.1
2,157,075	-				+0.0
2,157,079	+				-0.7
2,157,079	+				+0.6
2,157,079	+				-1.0
2,157,079	+				+0.0
2,157,080	-				-0.5
2,157,080	-				+0.8
2,157,080	-				+0.8
2,157,086	+				-1.5
2,157,117	+				+0.4
2,157,118	-				-0.1
2,157,138	-				-0.4
2,157,148	+				-0.3
2,157,148	+				-0.4
2,157,148	+				-2.1
2,157,148	+				+0.2
2,157,148	+				-1.7
2,157,149	-				-1.5
2,157,149	-				-0.3
2,157,178	+				+1.5
2,157,179	-				+0.2
2,157,252	+				+0.4
2,157,253	-				-2.4
2,157,302	+				-0.8
2,157,303	-				-0.1
2,157,305	+				-0.1
2,157,305	+				-0.2
2,157,306	-				+1.4
2,157,306	-				-0.8
2,157,306	-				-0.2
2,157,306	-				-1.4
2,157,306	-				-2.0
2,157,306	-				+0.2
2,157,306	-				-0.4
2,157,306	-				-0.2
2,157,306	-				-0.7
2,157,344	-				-0.4
2,157,425	+		DZA65_RS10205	0.15	-2.0
2,157,425	+		DZA65_RS10205	0.15	+0.2
2,157,425	+		DZA65_RS10205	0.15	-0.4
2,157,425	+		DZA65_RS10205	0.15	-0.2
2,157,425	+		DZA65_RS10205	0.15	+0.7
2,157,425	+		DZA65_RS10205	0.15	-1.4
2,157,425	+		DZA65_RS10205	0.15	+0.3
2,157,425	+		DZA65_RS10205	0.15	+1.0
2,157,425	+		DZA65_RS10205	0.15	+0.6
2,157,426	-		DZA65_RS10205	0.16	-0.1
2,157,426	-		DZA65_RS10205	0.16	-0.4
2,157,426	-		DZA65_RS10205	0.16	-0.7
2,157,426	-		DZA65_RS10205	0.16	+0.4
2,157,426	-		DZA65_RS10205	0.16	+0.2
2,157,426	-		DZA65_RS10205	0.16	+0.0
2,157,426	-		DZA65_RS10205	0.16	-0.6
2,157,426	-		DZA65_RS10205	0.16	+0.4
2,157,469	+		DZA65_RS10205	0.19	+1.3
2,157,469	+		DZA65_RS10205	0.19	+0.3
2,157,469	+		DZA65_RS10205	0.19	-0.8
2,157,469	+		DZA65_RS10205	0.19	-1.9
2,157,469	+		DZA65_RS10205	0.19	-0.7
2,157,470	-		DZA65_RS10205	0.19	-0.1
2,157,470	-		DZA65_RS10205	0.19	-0.1
2,157,493	+		DZA65_RS10205	0.21	+0.2
2,157,494	-		DZA65_RS10205	0.21	-1.2
2,157,502	+		DZA65_RS10205	0.21	+1.2
2,157,502	+		DZA65_RS10205	0.21	+0.4
2,157,503	-		DZA65_RS10205	0.21	-0.6
2,157,524	+		DZA65_RS10205	0.23	+0.4
2,157,524	+		DZA65_RS10205	0.23	+0.4
2,157,524	+		DZA65_RS10205	0.23	+0.5
2,157,525	-		DZA65_RS10205	0.23	-0.1
2,157,525	-		DZA65_RS10205	0.23	-0.3
2,157,533	+		DZA65_RS10205	0.24	+0.4
2,157,533	+		DZA65_RS10205	0.24	+0.0
2,157,533	+		DZA65_RS10205	0.24	-0.7
2,157,534	-		DZA65_RS10205	0.24	-1.0
2,157,535	+		DZA65_RS10205	0.24	+0.0
2,157,603	+		DZA65_RS10205	0.29	-0.3
2,157,604	-		DZA65_RS10205	0.29	+0.6
2,157,620	-		DZA65_RS10205	0.30	-0.2
2,157,658	+		DZA65_RS10205	0.33	-0.5
2,157,659	-		DZA65_RS10205	0.33	+2.6
2,157,659	-		DZA65_RS10205	0.33	+0.8
2,157,695	-		DZA65_RS10205	0.36	-0.2
2,157,783	+		DZA65_RS10205	0.43	-1.0
2,157,783	+		DZA65_RS10205	0.43	+0.6
2,157,784	-		DZA65_RS10205	0.43	+0.4
2,157,784	-		DZA65_RS10205	0.43	+0.6
2,157,787	+		DZA65_RS10205	0.43	-1.0
2,157,787	+		DZA65_RS10205	0.43	-0.2
2,157,787	+		DZA65_RS10205	0.43	+0.5
2,157,788	-				+0.6
2,157,788	-		DZA65_RS10205	0.43	+0.1
2,157,788	-		DZA65_RS10205	0.43	-2.8
2,157,809	+		DZA65_RS10205	0.45	-0.5
2,157,809	+		DZA65_RS10205	0.45	-1.3
2,157,809	+		DZA65_RS10205	0.45	+0.2
2,157,809	+		DZA65_RS10205	0.45	+0.4
2,157,810	-		DZA65_RS10205	0.45	-0.4
2,157,810	-		DZA65_RS10205	0.45	+0.2
2,157,810	-		DZA65_RS10205	0.45	+1.8
2,157,877	+		DZA65_RS10205	0.50	-0.0
2,158,012	+		DZA65_RS10205	0.60	-0.5
2,158,012	+		DZA65_RS10205	0.60	-1.0
2,158,012	+		DZA65_RS10205	0.60	-0.0
2,158,012	+		DZA65_RS10205	0.60	+0.4
2,158,012	+		DZA65_RS10205	0.60	+1.4
2,158,012	+		DZA65_RS10205	0.60	-1.2
2,158,012	+		DZA65_RS10205	0.60	+1.5
2,158,012	+		DZA65_RS10205	0.60	-0.7
2,158,013	-		DZA65_RS10205	0.60	-1.3
2,158,013	-		DZA65_RS10205	0.60	-0.4
2,158,013	-		DZA65_RS10205	0.60	-3.4
2,158,013	-		DZA65_RS10205	0.60	-0.8
2,158,013	-		DZA65_RS10205	0.60	-0.5
2,158,013	-		DZA65_RS10205	0.60	-2.8
2,158,013	-		DZA65_RS10205	0.60	-0.4
2,158,070	+		DZA65_RS10205	0.64	-0.6
2,158,071	-		DZA65_RS10205	0.64	+0.9
2,158,123	+		DZA65_RS10205	0.68	+0.1
2,158,124	-		DZA65_RS10205	0.68	-1.5
2,158,139	+		DZA65_RS10205	0.70	+1.3
2,158,140	-		DZA65_RS10205	0.70	-0.3
2,158,192	+		DZA65_RS10205	0.74	-1.2
2,158,192	+		DZA65_RS10205	0.74	-0.4
2,158,195	+		DZA65_RS10205	0.74	-0.1
2,158,196	-				+0.2
2,158,196	-		DZA65_RS10205	0.74	-1.1
2,158,206	-		DZA65_RS10205	0.75	-1.1
2,158,206	-		DZA65_RS10205	0.75	-0.0
2,158,206	-		DZA65_RS10205	0.75	-2.8
2,158,206	-		DZA65_RS10205	0.75	-0.1
2,158,274	+		DZA65_RS10205	0.80	-0.4
2,158,274	+		DZA65_RS10205	0.80	-1.1
2,158,274	+		DZA65_RS10205	0.80	-1.7
2,158,275	-		DZA65_RS10205	0.80	-1.0
2,158,275	-		DZA65_RS10205	0.80	-1.1
2,158,301	+		DZA65_RS10205	0.82	-0.2
2,158,302	-		DZA65_RS10205	0.82	-0.4
2,158,325	+		DZA65_RS10205	0.84	-0.5
2,158,326	-		DZA65_RS10205	0.84	-1.0
2,158,326	-		DZA65_RS10205	0.84	+0.6
2,158,417	+				+1.4
2,158,417	+				+0.1
2,158,418	-				+0.6
2,158,496	+				+0.6
2,158,497	-				-0.2
2,158,497	-				+0.0
2,158,498	+				-0.6
2,158,498	+				-0.8
2,158,498	+				+0.0
2,158,499	-				+1.0
2,158,538	+				+0.0
2,158,538	+				+0.3
2,158,538	+				+1.4
2,158,593	+				+0.8
2,158,593	+				-0.4
2,158,593	+				+0.1
2,158,594	-				+0.8
2,158,594	-				+0.4
2,158,598	+				-1.3
2,158,598	+				-0.2
2,158,599	-				-0.4
2,158,599	-				-0.4
2,158,669	-				-2.2
2,158,669	-				+0.3
2,158,701	+				+0.6
2,158,701	+				-2.0
2,158,701	+				+0.1
2,158,701	+				-1.4
2,158,701	+				-0.1
2,158,701	+				+0.2
2,158,701	+				-0.1
2,158,701	+				+0.1
2,158,701	+				-1.5
2,158,701	+				-0.3
2,158,701	+				-2.0
2,158,701	+				-3.2
2,158,701	+				+1.0
2,158,702	-				-1.7
2,158,702	-				+0.3
2,158,702	-				-0.1
2,158,702	-				-1.0
2,158,702	-				+0.0
2,158,702	-				+1.2
2,158,702	-				-0.8
2,158,702	-				-0.4
2,158,702	-				-1.0
2,158,702	-				+0.1
2,158,705	+				+2.2
2,158,705	+				+0.6
2,158,705	+				-1.1
2,158,705	+				+0.4
2,158,706	-				-0.6
2,158,706	-				-1.2
2,158,706	-				+2.7
2,158,726	+				-2.5
2,158,727	-				+0.0
2,158,727	-				-0.7
2,158,759	+				+0.2
2,158,759	+				-1.7
2,158,759	+				-1.2
2,158,759	+				+0.6
2,158,760	-				-1.4
2,158,760	-				-2.0
2,158,823	+				-1.7
2,158,823	+				-0.2
2,158,823	+				-1.7
2,158,824	-				+0.6
2,158,824	-				-0.0
2,158,824	-				-0.8
2,158,824	-				+0.1
2,158,824	-				-0.7
2,158,827	+				-0.1
2,158,828	-				-0.4
2,158,828	-				-0.7
2,158,828	-				-1.5
2,158,863	+				-0.4
2,158,863	+				-1.8
2,158,864	-				+0.1
2,158,879	+				-0.4
2,158,880	-				-2.0
2,158,880	-				-0.1
2,158,891	+		DZA65_RS10210	0.10	-0.4
2,158,891	+		DZA65_RS10210	0.10	+0.1
2,158,892	-		DZA65_RS10210	0.10	-0.8
2,158,892	-		DZA65_RS10210	0.10	-0.1
2,158,892	-		DZA65_RS10210	0.10	+0.2
2,158,900	+		DZA65_RS10210	0.11	+0.9
2,158,900	+		DZA65_RS10210	0.11	+0.0
2,158,900	+		DZA65_RS10210	0.11	+0.2
2,158,900	+		DZA65_RS10210	0.11	+0.6
2,158,900	+		DZA65_RS10210	0.11	-0.4
2,158,900	+		DZA65_RS10210	0.11	-0.1
2,158,900	+		DZA65_RS10210	0.11	-0.6
2,158,900	+		DZA65_RS10210	0.11	+3.1
2,158,900	+		DZA65_RS10210	0.11	-0.9
2,158,900	+		DZA65_RS10210	0.11	+0.9
2,158,900	+		DZA65_RS10210	0.11	-0.2
2,158,900	+		DZA65_RS10210	0.11	-0.2
2,158,900	+		DZA65_RS10210	0.11	+0.5
2,158,901	-		DZA65_RS10210	0.11	+0.2
2,158,901	-		DZA65_RS10210	0.11	-0.6
2,158,901	-		DZA65_RS10210	0.11	-0.5
2,158,901	-		DZA65_RS10210	0.11	+0.0
2,158,901	-				+1.9
2,158,942	+		DZA65_RS10210	0.16	-1.5
2,158,942	+		DZA65_RS10210	0.16	-1.0
2,158,943	-		DZA65_RS10210	0.16	+0.5
2,158,943	-		DZA65_RS10210	0.16	-0.5
2,158,943	-		DZA65_RS10210	0.16	-1.3
2,158,943	-		DZA65_RS10210	0.16	-0.7
2,158,944	+		DZA65_RS10210	0.16	-0.2
2,158,945	-		DZA65_RS10210	0.16	-1.4
2,158,945	-		DZA65_RS10210	0.16	+0.1
2,158,945	-		DZA65_RS10210	0.16	-1.1
2,158,945	-		DZA65_RS10210	0.16	-0.1
2,158,975	+		DZA65_RS10210	0.19	+1.8
2,158,976	-		DZA65_RS10210	0.20	-0.3
2,158,976	-		DZA65_RS10210	0.20	+1.1
2,159,058	+		DZA65_RS10210	0.29	-1.0
2,159,058	+		DZA65_RS10210	0.29	+1.2
2,159,059	-		DZA65_RS10210	0.29	-0.1
2,159,059	-				-1.0
2,159,059	-		DZA65_RS10210	0.29	-0.4
2,159,059	-		DZA65_RS10210	0.29	-1.5
2,159,179	-		DZA65_RS10210	0.42	-2.0
2,159,226	+		DZA65_RS10210	0.47	+0.2
2,159,226	+		DZA65_RS10210	0.47	-0.2
2,159,226	+		DZA65_RS10210	0.47	-1.1
2,159,226	+		DZA65_RS10210	0.47	+0.1
2,159,226	+		DZA65_RS10210	0.47	-0.0
2,159,226	+		DZA65_RS10210	0.47	+0.4
2,159,227	-		DZA65_RS10210	0.47	-0.8
2,159,227	-		DZA65_RS10210	0.47	-0.6
2,159,227	-		DZA65_RS10210	0.47	-0.5
2,159,227	-		DZA65_RS10210	0.47	-0.4
2,159,227	-		DZA65_RS10210	0.47	-0.6
2,159,227	-		DZA65_RS10210	0.47	+0.6
2,159,227	-		DZA65_RS10210	0.47	-1.0
2,159,227	-		DZA65_RS10210	0.47	-1.0
2,159,376	+		DZA65_RS10210	0.64	+0.3
2,159,381	+		DZA65_RS10210	0.65	-0.4
2,159,382	-		DZA65_RS10210	0.65	+0.1
2,159,430	+		DZA65_RS10210	0.70	+0.3
2,159,488	+		DZA65_RS10210	0.77	-0.2
2,159,488	+		DZA65_RS10210	0.77	-0.4
2,159,489	-		DZA65_RS10210	0.77	-0.2
2,159,504	+		DZA65_RS10210	0.78	+0.3
2,159,505	-		DZA65_RS10210	0.78	+0.6
2,159,539	+		DZA65_RS10210	0.82	+0.4
2,159,540	-		DZA65_RS10210	0.82	-0.0
2,159,540	-		DZA65_RS10210	0.82	-0.3