Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08570

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,808,342	+		DZA65_RS08565	0.26	-0.6
1,808,343	-		DZA65_RS08565	0.26	-0.3
1,808,343	-		DZA65_RS08565	0.26	-0.8
1,808,343	-		DZA65_RS08565	0.26	-0.6
1,808,343	-		DZA65_RS08565	0.26	-0.2
1,808,382	+		DZA65_RS08565	0.29	+0.6
1,808,473	+		DZA65_RS08565	0.37	+0.8
1,808,473	+		DZA65_RS08565	0.37	-1.4
1,808,473	+		DZA65_RS08565	0.37	-0.7
1,808,590	+		DZA65_RS08565	0.46	+0.2
1,808,590	+		DZA65_RS08565	0.46	-0.5
1,808,590	+		DZA65_RS08565	0.46	+0.5
1,808,591	-				+0.8
1,808,591	-		DZA65_RS08565	0.46	-0.3
1,808,591	-		DZA65_RS08565	0.46	-1.5
1,808,591	-		DZA65_RS08565	0.46	+0.4
1,808,591	-		DZA65_RS08565	0.46	+0.3
1,808,591	-		DZA65_RS08565	0.46	+0.2
1,808,638	+		DZA65_RS08565	0.50	+0.1
1,808,639	-		DZA65_RS08565	0.50	+0.1
1,808,639	-		DZA65_RS08565	0.50	+0.4
1,808,639	-		DZA65_RS08565	0.50	+0.8
1,808,863	+		DZA65_RS08565	0.68	-0.7
1,808,888	+		DZA65_RS08565	0.70	+0.0
1,808,889	-		DZA65_RS08565	0.70	-1.6
1,808,924	-		DZA65_RS08565	0.73	+1.0
1,808,924	-		DZA65_RS08565	0.73	+1.8
1,808,974	+		DZA65_RS08565	0.77	+0.9
1,808,974	+		DZA65_RS08565	0.77	-0.2
1,808,974	+		DZA65_RS08565	0.77	-0.4
1,808,975	-		DZA65_RS08565	0.77	-1.6
1,808,975	-		DZA65_RS08565	0.77	-0.5
1,808,977	+		DZA65_RS08565	0.77	+1.2
1,808,977	+		DZA65_RS08565	0.77	-0.6
1,808,977	+		DZA65_RS08565	0.77	-1.3
1,808,977	+		DZA65_RS08565	0.77	+0.5
1,808,977	+		DZA65_RS08565	0.77	+0.8
1,808,977	+		DZA65_RS08565	0.77	+0.8
1,808,978	-				+2.8
1,808,978	-		DZA65_RS08565	0.78	-0.1
1,808,978	-		DZA65_RS08565	0.78	-2.1
1,808,978	-		DZA65_RS08565	0.78	-0.6
1,808,978	-		DZA65_RS08565	0.78	-0.6
1,809,134	+				+0.8
1,809,134	+				+0.1
1,809,134	+				-1.1
1,809,134	+				-0.2
1,809,134	+				+0.2
1,809,134	+				+0.4
1,809,134	+				+1.4
1,809,134	+				+0.1
1,809,134	+				+0.3
1,809,134	+				+0.5
1,809,135	-				+0.4
1,809,135	-				-1.8
1,809,135	-				-1.8
1,809,135	-				-1.2
1,809,135	-				-0.5
1,809,135	-				+0.4
1,809,135	-				+0.3
1,809,135	-				+0.3
1,809,135	-				+0.5
1,809,143	+				+0.8
1,809,143	+				-0.5
1,809,143	+				-1.2
1,809,143	+				-0.8
1,809,144	-				-1.8
1,809,144	-				+0.0
1,809,144	-				-0.8
1,809,144	-				+0.0
1,809,144	-				-1.3
1,809,144	-				-2.2
1,809,147	-				-0.1
1,809,203	+				+1.8
1,809,204	-				-0.3
1,809,204	-				+0.0
1,809,204	-				-0.6
1,809,204	-				-1.4
1,809,204	-				-0.7
1,809,204	-				-0.1
1,809,215	+				-0.0
1,809,215	+				+0.8
1,809,215	+				+0.3
1,809,216	-				-1.2
1,809,251	+				-2.2
1,809,251	+				-1.0
1,809,251	+				-2.6
1,809,251	+				+0.8
1,809,252	-				+0.9
1,809,266	+				-0.2
1,809,361	-		DZA65_RS08570	0.20	-0.2
1,809,559	+		DZA65_RS08570	0.57	+0.0
1,809,560	-		DZA65_RS08570	0.57	+1.1
1,809,560	-		DZA65_RS08570	0.57	-0.7
1,809,577	+		DZA65_RS08570	0.60	+0.2
1,809,577	+		DZA65_RS08570	0.60	-1.2
1,809,577	+		DZA65_RS08570	0.60	+0.3
1,809,577	+		DZA65_RS08570	0.60	+1.0
1,809,577	+		DZA65_RS08570	0.60	+1.0
1,809,577	+		DZA65_RS08570	0.60	+0.1
1,809,578	-		DZA65_RS08570	0.61	-0.3
1,809,578	-		DZA65_RS08570	0.61	+0.2
1,809,578	-		DZA65_RS08570	0.61	+0.0
1,809,604	+		DZA65_RS08570	0.65	+0.3
1,809,640	+		DZA65_RS08570	0.72	+0.5
1,809,640	+		DZA65_RS08570	0.72	-0.1
1,809,640	+		DZA65_RS08570	0.72	-0.2
1,809,640	+		DZA65_RS08570	0.72	+0.2
1,809,640	+		DZA65_RS08570	0.72	-0.1
1,809,640	+		DZA65_RS08570	0.72	-0.0
1,809,640	+		DZA65_RS08570	0.72	+0.0
1,809,640	+		DZA65_RS08570	0.72	+0.8
1,809,640	+		DZA65_RS08570	0.72	+0.0
1,809,640	+		DZA65_RS08570	0.72	+0.2
1,809,641	-		DZA65_RS08570	0.72	-0.4
1,809,641	-		DZA65_RS08570	0.72	-0.8
1,809,641	-		DZA65_RS08570	0.72	+1.5
1,809,641	-		DZA65_RS08570	0.72	+0.3
1,809,641	-		DZA65_RS08570	0.72	+0.3
1,809,641	-		DZA65_RS08570	0.72	+1.2
1,809,641	-		DZA65_RS08570	0.72	+1.2
1,809,641	-		DZA65_RS08570	0.72	+0.8
1,809,661	+		DZA65_RS08570	0.76	-0.1
1,809,661	+		DZA65_RS08570	0.76	-1.5
1,809,661	+		DZA65_RS08570	0.76	-0.2
1,809,661	+		DZA65_RS08570	0.76	+0.6
1,809,662	-		DZA65_RS08570	0.76	-0.5
1,809,662	-		DZA65_RS08570	0.76	-0.2
1,809,662	-		DZA65_RS08570	0.76	+0.8
1,809,662	-				+2.3
1,809,724	+		DZA65_RS08570	0.88	-2.0
1,809,724	+		DZA65_RS08570	0.88	+0.1
1,809,724	+		DZA65_RS08570	0.88	-2.8
1,809,725	-		DZA65_RS08570	0.88	-0.2
1,809,725	-		DZA65_RS08570	0.88	+0.6
1,809,725	-		DZA65_RS08570	0.88	-0.0
1,809,725	-		DZA65_RS08570	0.88	+0.6
1,809,725	-		DZA65_RS08570	0.88	+0.5
1,809,787	+				-0.4
1,809,787	+				-0.4
1,809,787	+				+0.1
1,809,787	+				+0.4
1,809,788	-				-0.2
1,809,791	+				+0.9
1,809,791	+				+1.0
1,809,791	+				-0.8
1,809,791	+				+0.5
1,809,791	+				-1.6
1,809,791	+				-2.2
1,809,791	+				-1.1
1,809,791	+				+0.3
1,809,791	+				+0.2
1,809,792	-				-0.0
1,809,792	-				+1.0
1,809,792	-				-1.0
1,809,792	-				+1.2
1,809,792	-				+1.1
1,809,792	-				+0.3
1,809,792	-				+1.0
1,809,792	-				-0.2
1,809,812	+				+0.8
1,809,877	-				+0.6
1,809,912	+				-1.1
1,809,918	+				-0.2
1,809,951	+		DZA65_RS08575	0.12	+1.0
1,809,951	+		DZA65_RS08575	0.12	-2.4
1,809,951	+		DZA65_RS08575	0.12	-0.7
1,809,951	+		DZA65_RS08575	0.12	+0.9
1,809,952	-		DZA65_RS08575	0.12	+2.3
1,809,952	-		DZA65_RS08575	0.12	-1.1
1,809,956	+		DZA65_RS08575	0.12	+0.5
1,809,956	+		DZA65_RS08575	0.12	-0.4
1,809,956	+		DZA65_RS08575	0.12	-0.3
1,809,957	-		DZA65_RS08575	0.12	-1.1
1,809,979	+		DZA65_RS08575	0.14	-0.6
1,810,012	+		DZA65_RS08575	0.16	+0.0
1,810,013	-		DZA65_RS08575	0.17	+1.8
1,810,089	+		DZA65_RS08575	0.22	-1.1
1,810,089	+				+1.5
1,810,089	+		DZA65_RS08575	0.22	+0.3
1,810,089	+		DZA65_RS08575	0.22	-0.8
1,810,090	-		DZA65_RS08575	0.22	-0.4
1,810,090	-		DZA65_RS08575	0.22	-1.2
1,810,090	-		DZA65_RS08575	0.22	+0.1
1,810,278	+		DZA65_RS08575	0.36	+0.4
1,810,279	-		DZA65_RS08575	0.36	+1.1
1,810,343	+		DZA65_RS08575	0.41	+0.3
1,810,343	+		DZA65_RS08575	0.41	-0.7
1,810,350	-		DZA65_RS08575	0.42	+1.2
1,810,361	+		DZA65_RS08575	0.43	+0.2
1,810,362	-		DZA65_RS08575	0.43	-0.5
1,810,362	-		DZA65_RS08575	0.43	-0.6
1,810,717	+		DZA65_RS08575	0.69	+0.8
1,810,771	-		DZA65_RS08575	0.73	+1.2