Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07070

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,464,153	-		DZA65_RS07060	0.63	-1.1
1,464,153	-		DZA65_RS07060	0.63	-0.5
1,464,176	+		DZA65_RS07060	0.67	-0.9
1,464,176	+		DZA65_RS07060	0.67	-0.2
1,464,303	+		DZA65_RS07060	0.86	-0.6
1,464,304	-		DZA65_RS07060	0.87	+1.3
1,464,304	-		DZA65_RS07060	0.87	+0.6
1,464,311	+		DZA65_RS07060	0.88	-1.9
1,464,353	+				+0.9
1,464,388	-				+0.2
1,464,394	+				-0.7
1,464,394	+				-1.7
1,464,395	-				+2.7
1,464,433	+				-0.2
1,464,433	+				-0.9
1,464,434	-				-1.4
1,464,434	-				+0.0
1,464,434	-				+0.9
1,464,434	-				-1.6
1,464,434	-				-0.1
1,464,434	-				+0.9
1,464,434	-				+0.1
1,464,548	-				-0.7
1,464,623	-		DZA65_RS07065	0.23	-0.7
1,464,623	-		DZA65_RS07065	0.23	+0.9
1,464,623	-		DZA65_RS07065	0.23	-0.3
1,464,909	-		DZA65_RS07065	0.72	+0.1
1,464,909	-		DZA65_RS07065	0.72	+1.6
1,465,001	+		DZA65_RS07065	0.88	+0.2
1,465,001	+		DZA65_RS07065	0.88	+0.5
1,465,001	+		DZA65_RS07065	0.88	+0.7
1,465,001	+		DZA65_RS07065	0.88	+0.7
1,465,001	+		DZA65_RS07065	0.88	+0.1
1,465,002	-		DZA65_RS07065	0.88	-0.3
1,465,002	-		DZA65_RS07065	0.88	+0.0
1,465,002	-		DZA65_RS07065	0.88	+0.9
1,465,026	-				-1.1
1,465,026	-				-0.2
1,465,026	-				+0.5
1,465,070	+				+1.3
1,465,070	+				-0.7
1,465,070	+				-2.4
1,465,070	+				-0.7
1,465,071	-				-1.1
1,465,071	-				-2.7
1,465,071	-				-1.6
1,465,071	-				-1.9
1,465,204	+				-0.7
1,465,204	+				-0.4
1,465,204	+				-1.4
1,465,204	+				+0.5
1,465,204	+				-0.8
1,465,204	+				-0.7
1,465,204	+				-1.0
1,465,204	+				-0.5
1,465,204	+				-3.3
1,465,204	+				-1.0
1,465,204	+				-0.3
1,465,205	-				-0.1
1,465,205	-				-0.3
1,465,205	-				-0.6
1,465,205	-				+0.2
1,465,205	-				-0.9
1,465,205	-				+0.3
1,465,205	-				-0.2
1,465,205	-				-0.9
1,465,205	-				-0.7
1,465,205	-				+0.4
1,465,205	-				-1.4
1,465,205	-				+0.2
1,465,205	-				-0.9
1,465,205	-				-1.4
1,465,205	-				-0.8
1,465,205	-				+1.6
1,465,205	-				+0.1
1,465,205	-				-1.2
1,465,205	-				-1.4
1,465,205	-				-0.0
1,465,205	-				+0.3
1,465,205	-				+0.5
1,465,205	-				+0.5
1,465,205	-				+0.6
1,465,205	-				-0.2
1,465,206	+				-0.1
1,465,206	+				-1.7
1,465,206	+				-0.1
1,465,206	+				+0.9
1,465,207	-				-1.2
1,465,207	-				-0.5
1,465,207	-				-0.7
1,465,207	-				-0.4
1,465,207	-				-0.9
1,465,207	-				-2.3
1,465,207	-				-0.3
1,465,207	-				-1.6
1,465,356	+		DZA65_RS07070	0.14	-0.9
1,465,357	-		DZA65_RS07070	0.14	-1.3
1,465,537	-		DZA65_RS07070	0.24	-0.6
1,465,571	+		DZA65_RS07070	0.26	-1.4
1,465,571	+		DZA65_RS07070	0.26	+0.4
1,465,572	-		DZA65_RS07070	0.26	-1.4
1,465,572	-		DZA65_RS07070	0.26	+0.9
1,465,733	-		DZA65_RS07070	0.35	-1.1
1,465,733	-		DZA65_RS07070	0.35	-1.3
1,465,771	+		DZA65_RS07070	0.37	-1.2
1,465,838	-		DZA65_RS07070	0.40	-1.8
1,465,838	-		DZA65_RS07070	0.40	-0.1
1,465,838	-		DZA65_RS07070	0.40	-1.8
1,465,890	+		DZA65_RS07070	0.43	+0.1
1,465,890	+				-1.1
1,465,890	+		DZA65_RS07070	0.43	-2.4
1,465,890	+		DZA65_RS07070	0.43	-1.3
1,465,891	-		DZA65_RS07070	0.43	+0.2
1,465,891	-		DZA65_RS07070	0.43	+1.4
1,465,891	-		DZA65_RS07070	0.43	-1.1
1,465,891	-		DZA65_RS07070	0.43	-0.9
1,465,893	+		DZA65_RS07070	0.43	+0.1
1,465,893	+		DZA65_RS07070	0.43	-0.3
1,465,894	-		DZA65_RS07070	0.43	-3.3
1,465,894	-		DZA65_RS07070	0.43	-1.2
1,465,894	-		DZA65_RS07070	0.43	-0.3
1,465,894	-		DZA65_RS07070	0.43	-1.4
1,465,942	+		DZA65_RS07070	0.46	+0.9
1,465,942	+		DZA65_RS07070	0.46	-1.9
1,465,942	+		DZA65_RS07070	0.46	-0.1
1,465,942	+		DZA65_RS07070	0.46	-1.1
1,465,942	+		DZA65_RS07070	0.46	-0.6
1,465,942	+		DZA65_RS07070	0.46	+0.3
1,465,942	+		DZA65_RS07070	0.46	-1.1
1,465,942	+		DZA65_RS07070	0.46	-0.3
1,465,943	-		DZA65_RS07070	0.46	+0.9
1,465,943	-		DZA65_RS07070	0.46	+0.4
1,465,943	-		DZA65_RS07070	0.46	+1.2
1,465,943	-		DZA65_RS07070	0.46	-0.0
1,465,943	-		DZA65_RS07070	0.46	+2.3
1,465,943	-		DZA65_RS07070	0.46	+0.5
1,466,036	+		DZA65_RS07070	0.51	-0.2
1,466,080	+		DZA65_RS07070	0.54	-0.3
1,466,094	+		DZA65_RS07070	0.54	-0.5
1,466,094	+		DZA65_RS07070	0.54	-0.8
1,466,094	+		DZA65_RS07070	0.54	-0.9
1,466,095	-		DZA65_RS07070	0.55	+0.4
1,466,095	-		DZA65_RS07070	0.55	+0.0
1,466,095	-		DZA65_RS07070	0.55	-1.1
1,466,127	+		DZA65_RS07070	0.56	-0.5
1,466,127	+		DZA65_RS07070	0.56	-1.4
1,466,127	+		DZA65_RS07070	0.56	+0.1
1,466,128	-		DZA65_RS07070	0.56	-1.3
1,466,128	-		DZA65_RS07070	0.56	+0.1
1,466,128	-		DZA65_RS07070	0.56	-0.3
1,466,128	-		DZA65_RS07070	0.56	-1.1
1,466,128	-		DZA65_RS07070	0.56	+2.5
1,466,137	+		DZA65_RS07070	0.57	+0.4
1,466,138	-		DZA65_RS07070	0.57	-0.2
1,466,163	+		DZA65_RS07070	0.58	+0.7
1,466,163	+		DZA65_RS07070	0.58	-0.3
1,466,164	-		DZA65_RS07070	0.58	+0.5
1,466,164	-		DZA65_RS07070	0.58	-0.1
1,466,283	+		DZA65_RS07070	0.65	-0.4
1,466,284	-		DZA65_RS07070	0.65	-0.0
1,466,284	-		DZA65_RS07070	0.65	-1.9
1,466,284	-		DZA65_RS07070	0.65	+0.3
1,466,284	-		DZA65_RS07070	0.65	-0.3
1,466,548	+		DZA65_RS07070	0.80	-0.8
1,466,549	-		DZA65_RS07070	0.80	-0.7
1,466,776	+				-0.6
1,466,800	+				+2.0
1,466,800	+				-1.9
1,466,801	-				-1.7
1,466,895	+				+0.1
1,466,895	+				+0.0
1,466,896	-				-0.0
1,466,924	+				-1.4
1,466,924	+				-0.7
1,466,925	-				+1.1
1,466,925	-				+0.0
1,466,927	+				-0.3
1,466,927	+				+1.6
1,466,928	-				+0.3
1,466,928	-				+0.1
1,466,928	-				-0.2
1,466,928	-				+0.5
1,466,980	+				-1.3
1,466,988	+				-0.3
1,466,988	+				+0.6
1,466,989	-				+1.3
1,466,989	-				+0.1
1,466,989	-				+0.3
1,466,989	-				-2.4
1,466,998	+				+0.5
1,466,998	+				+0.7
1,466,998	+				+1.5
1,466,998	+				+1.3
1,466,998	+				+0.4
1,466,999	-				-0.4
1,466,999	-				+0.0
1,466,999	-				+0.1
1,466,999	-				+1.9
1,466,999	-				+0.1
1,466,999	-				-0.0
1,466,999	-				+0.3
1,466,999	-				-1.1
1,466,999	-				-0.2
1,466,999	-				+1.1
1,466,999	-				+2.2
1,466,999	-				-0.1
1,466,999	-				+0.5
1,467,002	+				-0.3
1,467,002	+				-0.1
1,467,002	+				-1.6
1,467,002	+				-0.7
1,467,002	+				+1.2
1,467,002	+				-0.1
1,467,003	-				-1.0
1,467,003	-				-0.3
1,467,003	-				+0.7
1,467,003	-				+0.7
1,467,003	-				+0.1
1,467,012	-				-0.0
1,467,012	-				-1.7
1,467,017	+				-0.5
1,467,017	+				+1.7
1,467,017	+				-0.1
1,467,017	+				-0.7
1,467,017	+				+1.2
1,467,017	+				+0.2
1,467,018	-				-0.9
1,467,018	-				+1.1
1,467,018	-				-1.0
1,467,018	-				-1.1
1,467,018	-				-0.1
1,467,018	-				+0.4
1,467,018	-				+1.2
1,467,018	-				+0.1
1,467,018	-				+0.4
1,467,018	-				-0.1
1,467,018	-				+0.3
1,467,018	-				-0.2
1,467,018	-				-1.0
1,467,021	+				-1.1
1,467,021	+				+0.5
1,467,021	+				+0.7
1,467,021	+				-0.4
1,467,022	-				-0.7
1,467,022	-				-0.0
1,467,022	-				-2.1
1,467,022	-				-3.1
1,467,022	-				+0.6
1,467,022	-				-2.3
1,467,030	+				+0.4
1,467,030	+				-0.8
1,467,031	-				+0.2
1,467,036	+				+0.1
1,467,036	+				+1.5
1,467,036	+				+0.5
1,467,036	+				-1.7
1,467,037	-				+0.4
1,467,037	-				+0.6
1,467,037	-				+0.9
1,467,037	-				-0.6
1,467,037	-				+0.5
1,467,040	+				+0.6
1,467,041	-				+1.3
1,467,041	-				+0.9
1,467,041	-				+0.5
1,467,041	-				+0.1
1,467,041	-				-2.3
1,467,041	-				-0.2
1,467,041	-				-0.8
1,467,041	-				+0.1
1,467,041	-				-1.7
1,467,041	-				-0.1
1,467,041	-				-0.3
1,467,041	-				-0.7
1,467,041	-				-1.0
1,467,041	-				-0.8
1,467,041	-				-0.5
1,467,050	-				-0.3
1,467,055	+				+0.5
1,467,055	+				+0.4
1,467,055	+				+2.5
1,467,055	+				-0.1
1,467,055	+				-0.3
1,467,055	+				-1.1
1,467,055	+				+0.9
1,467,055	+				+1.3
1,467,055	+				+1.2
1,467,055	+				+0.1
1,467,055	+				+1.8
1,467,056	-				+0.2
1,467,056	-				+0.1
1,467,056	-				+1.1
1,467,056	-				-0.0
1,467,056	-				-0.9
1,467,056	-				-0.5
1,467,059	+				+0.2
1,467,059	+				+0.9
1,467,059	+				+0.0
1,467,068	+				-0.3
1,467,074	+				+0.4
1,467,074	+				+0.5
1,467,074	+				-0.1
1,467,074	+				-0.1
1,467,075	-				+0.6
1,467,075	-				-2.3
1,467,075	-				+1.2
1,467,075	-				+0.1
1,467,075	-				-0.4
1,467,075	-				-0.1
1,467,079	-				+0.3
1,467,079	-				+0.8
1,467,088	-				-0.5
1,467,088	-				+0.5
1,467,088	-				+0.1
1,467,088	-				+0.5
1,467,091	+				+0.7
1,467,091	+				-1.2
1,467,091	+				+0.2
1,467,091	+				-0.0
1,467,091	+				+0.0
1,467,091	+				-2.1
1,467,091	+				-0.3
1,467,091	+				-0.4
1,467,091	+				+1.0
1,467,091	+				-0.3
1,467,092	-				+1.3
1,467,092	-				+0.6
1,467,092	-				-1.7
1,467,092	-				-0.3
1,467,093	+				-0.9
1,467,093	+				+0.0
1,467,093	+				-0.7
1,467,093	+				-0.7
1,467,093	+				+0.6
1,467,093	+				+1.0
1,467,094	-				-1.4
1,467,094	-				-0.1
1,467,094	-				+0.3
1,467,094	-				-1.1
1,467,094	-				+0.3
1,467,094	-				+0.9
1,467,094	-				-0.3
1,467,094	-				+0.3
1,467,094	-				+0.1
1,467,097	+				-1.8
1,467,097	+				-0.1
1,467,097	+				+0.1
1,467,097	+				-0.8
1,467,097	+				-0.5
1,467,097	+				-2.1
1,467,098	-				-0.5
1,467,098	-				-0.8
1,467,098	-				+0.1
1,467,098	-				-0.1
1,467,098	-				-0.3
1,467,098	-				-1.0
1,467,098	-				+0.3
1,467,098	-				+0.3
1,467,135	+				-0.3
1,467,135	+				+0.5
1,467,136	-				-0.4
1,467,136	-				+0.5
1,467,145	-				-2.4
1,467,145	-				-0.2
1,467,145	-				+0.2
1,467,179	+				+1.5
1,467,179	+				-1.7
1,467,226	+				-0.0
1,467,226	+				-0.3
1,467,226	+				-0.5
1,467,226	+				+0.4
1,467,227	-				+0.0
1,467,227	-				+0.3
1,467,227	-				+1.9
1,467,227	-				-0.5
1,467,227	-				-0.3
1,467,227	-				-1.9
1,467,227	-				+1.1
1,467,227	-				-0.2
1,467,227	-				-0.4
1,467,236	-				+0.9
1,467,239	+				+1.1
1,467,239	+				+0.5
1,467,239	+				-1.2
1,467,239	+				+0.2
1,467,240	-				+0.3
1,467,240	-				-1.4
1,467,240	-				+1.0
1,467,240	-				-1.7
1,467,273	+				+0.9
1,467,274	-				+0.2
1,467,334	+		DZA65_RS07075	0.13	+3.0
1,467,335	-		DZA65_RS07075	0.13	+1.2
1,467,335	-		DZA65_RS07075	0.13	+0.6
1,467,336	+		DZA65_RS07075	0.13	-0.8
1,467,336	+		DZA65_RS07075	0.13	-0.1
1,467,336	+		DZA65_RS07075	0.13	-0.1
1,467,336	+		DZA65_RS07075	0.13	-1.4
1,467,336	+		DZA65_RS07075	0.13	-0.3
1,467,336	+		DZA65_RS07075	0.13	-1.3
1,467,336	+		DZA65_RS07075	0.13	-1.9
1,467,336	+		DZA65_RS07075	0.13	-1.2
1,467,336	+		DZA65_RS07075	0.13	-0.7
1,467,336	+		DZA65_RS07075	0.13	-1.7
1,467,336	+		DZA65_RS07075	0.13	+0.2
1,467,336	+		DZA65_RS07075	0.13	+0.9
1,467,336	+		DZA65_RS07075	0.13	-1.8
1,467,336	+		DZA65_RS07075	0.13	+0.1
1,467,336	+		DZA65_RS07075	0.13	-0.2
1,467,336	+		DZA65_RS07075	0.13	+0.3
1,467,336	+		DZA65_RS07075	0.13	-2.1
1,467,336	+		DZA65_RS07075	0.13	+0.1
1,467,336	+		DZA65_RS07075	0.13	+0.3
1,467,336	+		DZA65_RS07075	0.13	+1.4
1,467,336	+		DZA65_RS07075	0.13	-0.4
1,467,336	+		DZA65_RS07075	0.13	-0.4
1,467,336	+		DZA65_RS07075	0.13	+1.5
1,467,336	+		DZA65_RS07075	0.13	-0.3
1,467,337	-				+0.3
1,467,337	-		DZA65_RS07075	0.13	-1.3
1,467,337	-		DZA65_RS07075	0.13	-1.9
1,467,337	-		DZA65_RS07075	0.13	+0.6
1,467,337	-		DZA65_RS07075	0.13	-0.7
1,467,337	-		DZA65_RS07075	0.13	-0.7
1,467,337	-		DZA65_RS07075	0.13	+0.4
1,467,337	-		DZA65_RS07075	0.13	-0.5
1,467,337	-		DZA65_RS07075	0.13	+0.5
1,467,337	-		DZA65_RS07075	0.13	-0.8
1,467,337	-		DZA65_RS07075	0.13	-1.9
1,467,337	-		DZA65_RS07075	0.13	-1.1
1,467,337	-		DZA65_RS07075	0.13	-0.7
1,467,344	+		DZA65_RS07075	0.13	-0.5
1,467,345	-		DZA65_RS07075	0.13	+0.7
1,467,345	-		DZA65_RS07075	0.13	-0.1
1,467,345	-		DZA65_RS07075	0.13	-0.5
1,467,345	-		DZA65_RS07075	0.13	-0.3
1,467,363	+		DZA65_RS07075	0.14	-0.6
1,467,512	+		DZA65_RS07075	0.24	+0.2
1,467,618	-		DZA65_RS07075	0.30	-1.1