Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06735

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,396,256	+		DZA65_RS06725	0.81	-2.1
1,396,256	+		DZA65_RS06725	0.81	+1.2
1,396,256	+		DZA65_RS06725	0.81	-0.4
1,396,259	+		DZA65_RS06725	0.81	+0.1
1,396,259	+		DZA65_RS06725	0.81	-1.8
1,396,259	+		DZA65_RS06725	0.81	-0.7
1,396,259	+		DZA65_RS06725	0.81	+0.2
1,396,260	-		DZA65_RS06725	0.81	+1.1
1,396,260	-		DZA65_RS06725	0.81	+0.5
1,396,260	-		DZA65_RS06725	0.81	-0.7
1,396,260	-		DZA65_RS06725	0.81	+0.3
1,396,260	-		DZA65_RS06725	0.81	-0.3
1,396,260	-		DZA65_RS06725	0.81	+0.7
1,396,260	-		DZA65_RS06725	0.81	+0.8
1,396,295	+		DZA65_RS06725	0.83	-0.3
1,396,295	+		DZA65_RS06725	0.83	+1.9
1,396,296	-		DZA65_RS06725	0.83	-0.4
1,396,296	-		DZA65_RS06725	0.83	-2.8
1,396,296	-		DZA65_RS06725	0.83	+0.2
1,396,296	-		DZA65_RS06725	0.83	-1.4
1,396,296	-		DZA65_RS06725	0.83	-1.7
1,396,296	-		DZA65_RS06725	0.83	+0.7
1,396,302	-		DZA65_RS06725	0.83	-1.1
1,396,302	-		DZA65_RS06725	0.83	+1.5
1,396,565	+				+0.5
1,396,565	+				+0.3
1,396,566	-				+0.2
1,396,586	+				-0.5
1,396,586	+				+0.0
1,396,586	+				-0.8
1,396,586	+				+0.2
1,396,587	-				-1.4
1,396,587	-				+0.0
1,396,603	+				-1.7
1,396,603	+				-2.0
1,396,604	-				+0.7
1,396,604	-				-0.4
1,396,604	-				-2.1
1,396,604	-				-0.2
1,396,604	-				+0.6
1,396,604	-				-1.8
1,396,604	-				-0.6
1,396,606	+				+0.2
1,396,607	-				-0.4
1,396,607	-				+0.2
1,396,607	-				-0.1
1,396,607	-				-1.3
1,396,607	-				+0.4
1,396,676	+				-0.8
1,396,676	+				+1.2
1,396,676	+				-0.4
1,396,676	+				-0.3
1,396,676	+				+0.4
1,396,677	-				+0.6
1,396,677	-				+0.7
1,396,677	-				+1.3
1,396,813	+		DZA65_RS06730	0.59	+1.3
1,396,814	-		DZA65_RS06730	0.59	-0.2
1,396,814	-		DZA65_RS06730	0.59	+0.7
1,396,824	-		DZA65_RS06730	0.63	-0.4
1,396,924	+				+0.0
1,396,924	+				+0.4
1,396,924	+				+0.2
1,396,924	+				+0.2
1,396,924	+				+2.4
1,396,924	+				+0.9
1,396,924	+				+0.3
1,396,924	+				+0.3
1,396,924	+				-0.7
1,396,925	-				-2.3
1,396,925	-				-0.3
1,396,925	-				+1.9
1,396,925	-				-0.5
1,396,925	-				+0.7
1,396,928	+				+1.3
1,396,928	+				+1.2
1,396,928	+				+0.0
1,396,928	+				+0.1
1,396,928	+				+0.9
1,396,928	+				+0.7
1,396,928	+				+0.7
1,396,929	-				+0.3
1,396,929	-				+0.9
1,396,980	-				-0.5
1,396,980	-				+0.3
1,396,980	-				-0.4
1,396,980	-				-1.1
1,397,073	+				+0.9
1,397,073	+				+0.9
1,397,074	-				+1.1
1,397,074	-				+0.8
1,397,074	-				-0.7
1,397,087	+				+1.6
1,397,088	-				+1.7
1,397,091	-				+0.3
1,397,121	-				-0.3
1,397,142	-				+0.9
1,397,142	-				+0.1
1,397,206	+				-0.9
1,397,206	+				+0.9
1,397,206	+				+0.7
1,397,206	+				-0.4
1,397,206	+				+0.0
1,397,206	+				-0.2
1,397,206	+				+0.7
1,397,206	+				-1.4
1,397,206	+				+0.3
1,397,206	+				-0.3
1,397,206	+				-0.2
1,397,206	+				+2.1
1,397,206	+				+0.4
1,397,206	+				+0.3
1,397,207	-				+0.2
1,397,207	-				-0.1
1,397,207	-				+0.3
1,397,207	-				+0.3
1,397,207	-				+0.9
1,397,207	-				+0.3
1,397,207	-				-0.1
1,397,207	-				-1.1
1,397,342	-		DZA65_RS06735	0.17	+0.6
1,397,345	+		DZA65_RS06735	0.17	+0.4
1,397,345	+		DZA65_RS06735	0.17	+0.7
1,397,345	+		DZA65_RS06735	0.17	-1.1
1,397,346	-		DZA65_RS06735	0.18	-1.4
1,397,356	+		DZA65_RS06735	0.19	-0.4
1,397,448	+		DZA65_RS06735	0.31	+0.6
1,397,527	+		DZA65_RS06735	0.41	-0.1
1,397,528	-		DZA65_RS06735	0.41	-1.0
1,397,607	-		DZA65_RS06735	0.51	-0.2
1,397,619	+		DZA65_RS06735	0.53	+0.8
1,397,619	+		DZA65_RS06735	0.53	+0.3
1,397,620	-		DZA65_RS06735	0.53	+1.6
1,397,620	-		DZA65_RS06735	0.53	-0.4
1,397,620	-		DZA65_RS06735	0.53	-0.5
1,397,626	+		DZA65_RS06735	0.54	+1.2
1,397,626	+		DZA65_RS06735	0.54	+0.8
1,397,714	+		DZA65_RS06735	0.65	-2.8
1,397,714	+		DZA65_RS06735	0.65	-0.2
1,397,792	-		DZA65_RS06735	0.75	-0.1
1,397,792	-		DZA65_RS06735	0.75	+0.2
1,397,792	-		DZA65_RS06735	0.75	+0.7
1,397,849	+		DZA65_RS06735	0.83	+1.0
1,397,849	+		DZA65_RS06735	0.83	+0.3
1,397,849	+		DZA65_RS06735	0.83	-2.0
1,397,850	-		DZA65_RS06735	0.83	+0.1
1,397,850	-		DZA65_RS06735	0.83	-0.7
1,397,918	+				-1.4
1,397,918	+				-1.1
1,397,918	+				-0.3
1,397,919	-				-2.1
1,397,919	-				+1.7
1,397,919	-				+0.0
1,397,919	-				-0.7
1,397,919	-				-0.7
1,397,968	+				-1.4
1,397,969	-				+1.1
1,397,969	-				-0.1
1,398,012	-				-0.7
1,398,104	+				-1.1
1,398,104	+				+0.9
1,398,105	-				-0.3
1,398,105	-				+0.0
1,398,105	-				-1.3
1,398,105	-				+0.7
1,398,105	-				-1.4
1,398,113	+				+0.1
1,398,113	+				+0.3
1,398,113	+				-0.8
1,398,113	+				+0.8
1,398,113	+				+1.4
1,398,114	-				-0.4
1,398,114	-				+1.2
1,398,114	-				+0.2
1,398,114	-				-0.8
1,398,114	-				-0.1
1,398,114	-				-0.1
1,398,114	-				-0.9
1,398,114	-				-0.6
1,398,121	+				-0.7
1,398,121	+				-0.9
1,398,122	-				+1.9
1,398,122	-				-1.1
1,398,122	-				-1.9
1,398,122	-				-1.2
1,398,139	+				+0.2
1,398,140	-				-0.9
1,398,140	-				+0.6
1,398,140	-				-1.9
1,398,140	-				-0.0
1,398,140	-				+0.5
1,398,167	+				+1.3
1,398,168	-				+0.2
1,398,218	+				-0.8
1,398,219	-				+1.2
1,398,225	+				+0.4
1,398,225	+				-1.9
1,398,225	+				+0.0
1,398,227	+				+0.9
1,398,227	+				+0.6
1,398,228	-				-0.1
1,398,245	+				-0.8
1,398,253	+				+0.6
1,398,253	+				+0.0
1,398,254	-				-0.4
1,398,254	-				-2.4
1,398,261	+				-1.9
1,398,304	-				-0.7
1,398,751	-		DZA65_RS06740	0.89	+0.2
1,398,810	+				+0.3
1,398,810	+				+0.5
1,398,810	+				-0.7
1,398,810	+				+0.6
1,398,811	-				-1.7
1,398,844	-				+0.7
1,398,867	+				-0.8
1,398,867	+				-2.1
1,398,888	+				-0.7
1,398,888	+				-1.2
1,398,888	+				-0.4
1,398,889	-				-3.0
1,398,889	-				-1.2
1,398,913	+				-0.1
1,398,916	+				-0.7
1,398,916	+				-0.4
1,398,916	+				-0.5
1,398,916	+				+0.3
1,398,916	+				-0.5
1,398,916	+				-0.5
1,398,916	+				+1.5
1,398,916	+				+0.4
1,398,916	+				-0.8
1,398,916	+				-0.4
1,398,916	+				+0.1
1,398,916	+				-1.0
1,398,916	+				+1.7
1,398,916	+				-1.2
1,398,916	+				+0.3
1,398,917	-				-0.4
1,398,917	-				-0.6
1,398,917	-				-1.1
1,398,917	-				-0.3
1,398,917	-				-1.2
1,398,917	-				-0.7
1,398,917	-				-1.4
1,398,917	-				-2.8
1,398,917	-				-0.6
1,398,917	-				-0.7
1,398,917	-				-1.0
1,398,917	-				-0.1
1,398,917	-				-2.3
1,398,917	-				+1.5
1,398,917	-				-2.3
1,398,917	-				+0.1
1,398,917	-				-1.6
1,398,958	-				+0.1