Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01870 and DZA65_RS01875 are separated by 124 nucleotides DZA65_RS01875 and DZA65_RS01880 are separated by 98 nucleotides
DZA65_RS01870: DZA65_RS01870 - YhbP family protein, at 411,253 to 411,705
_RS01870
DZA65_RS01875: DZA65_RS01875 - anaerobic ribonucleoside-triphosphate reductase-activating protein, at 411,830 to 412,294
_RS01875
DZA65_RS01880: DZA65_RS01880 - anaerobic ribonucleoside-triphosphate reductase, at 412,393 to 414,531
_RS01880
Position (kb) 411
412
413 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 410.836 kb on + strand at 410.847 kb on + strand at 410.847 kb on + strand at 410.847 kb on + strand at 410.847 kb on + strand at 410.848 kb on - strand at 410.848 kb on - strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.849 kb on + strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.850 kb on - strand at 410.851 kb on + strand at 410.851 kb on + strand at 410.852 kb on - strand at 410.852 kb on - strand at 410.852 kb on - strand at 410.852 kb on - strand at 410.874 kb on + strand at 410.874 kb on + strand at 410.874 kb on + strand at 410.874 kb on + strand at 410.874 kb on + strand at 410.874 kb on + strand at 410.875 kb on - strand at 410.875 kb on - strand at 410.880 kb on - strand at 410.880 kb on - strand at 410.880 kb on - strand at 410.928 kb on - strand at 410.961 kb on + strand at 410.962 kb on - strand at 410.970 kb on - strand at 411.027 kb on - strand at 411.046 kb on + strand at 411.047 kb on - strand at 411.047 kb on - strand at 411.155 kb on + strand at 411.177 kb on + strand at 411.177 kb on + strand at 411.177 kb on + strand at 411.177 kb on + strand at 411.177 kb on + strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.178 kb on - strand at 411.227 kb on - strand at 411.267 kb on + strand at 411.268 kb on - strand at 411.289 kb on + strand at 411.290 kb on - strand at 411.341 kb on + strand, within DZA65_RS01870 at 411.341 kb on + strand, within DZA65_RS01870 at 411.341 kb on + strand, within DZA65_RS01870 at 411.341 kb on + strand, within DZA65_RS01870 at 411.342 kb on - strand, within DZA65_RS01870 at 411.342 kb on - strand, within DZA65_RS01870 at 411.351 kb on + strand, within DZA65_RS01870 at 411.362 kb on - strand, within DZA65_RS01870 at 411.362 kb on - strand, within DZA65_RS01870 at 411.362 kb on - strand, within DZA65_RS01870 at 411.391 kb on + strand, within DZA65_RS01870 at 411.391 kb on + strand, within DZA65_RS01870 at 411.562 kb on + strand, within DZA65_RS01870 at 411.563 kb on - strand, within DZA65_RS01870 at 411.563 kb on - strand, within DZA65_RS01870 at 411.564 kb on + strand, within DZA65_RS01870 at 411.565 kb on - strand, within DZA65_RS01870 at 411.565 kb on - strand, within DZA65_RS01870 at 411.565 kb on - strand, within DZA65_RS01870 at 411.684 kb on + strand at 411.684 kb on + strand at 411.684 kb on + strand at 411.735 kb on - strand at 411.735 kb on - strand at 411.735 kb on - strand at 411.770 kb on + strand at 411.770 kb on + strand at 411.771 kb on - strand at 411.771 kb on - strand at 411.771 kb on - strand at 411.771 kb on - strand at 411.771 kb on - strand at 412.194 kb on + strand, within DZA65_RS01875 at 412.194 kb on + strand, within DZA65_RS01875 at 412.194 kb on + strand, within DZA65_RS01875 at 412.194 kb on + strand, within DZA65_RS01875 at 412.194 kb on + strand, within DZA65_RS01875 at 412.194 kb on + strand, within DZA65_RS01875 at 412.195 kb on - strand, within DZA65_RS01875 at 412.195 kb on - strand, within DZA65_RS01875 at 412.195 kb on - strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.237 kb on + strand, within DZA65_RS01875 at 412.238 kb on - strand, within DZA65_RS01875 at 412.238 kb on - strand, within DZA65_RS01875 at 412.238 kb on - strand, within DZA65_RS01875 at 412.278 kb on + strand at 412.278 kb on + strand at 412.278 kb on + strand at 412.278 kb on + strand at 412.278 kb on + strand at 412.278 kb on + strand at 412.279 kb on - strand at 412.279 kb on - strand at 412.279 kb on - strand at 412.279 kb on - strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.287 kb on + strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.288 kb on - strand at 412.294 kb on + strand at 412.551 kb on + strand at 412.551 kb on + strand at 412.552 kb on - strand at 412.599 kb on - strand at 412.599 kb on - strand at 412.629 kb on - strand at 412.631 kb on + strand, within DZA65_RS01880 at 412.632 kb on - strand, within DZA65_RS01880 at 412.646 kb on + strand, within DZA65_RS01880 at 412.646 kb on + strand, within DZA65_RS01880 at 412.646 kb on + strand, within DZA65_RS01880 at 412.646 kb on + strand, within DZA65_RS01880 at 412.646 kb on + strand, within DZA65_RS01880 at 412.652 kb on + strand, within DZA65_RS01880 at 412.653 kb on - strand, within DZA65_RS01880 at 412.653 kb on - strand, within DZA65_RS01880 at 412.653 kb on - strand, within DZA65_RS01880 at 412.653 kb on - strand, within DZA65_RS01880 at 412.660 kb on + strand, within DZA65_RS01880 at 412.661 kb on - strand, within DZA65_RS01880 at 412.661 kb on - strand, within DZA65_RS01880 at 412.661 kb on - strand, within DZA65_RS01880 at 412.661 kb on - strand, within DZA65_RS01880 at 412.701 kb on - strand, within DZA65_RS01880 at 412.716 kb on + strand, within DZA65_RS01880 at 412.716 kb on + strand, within DZA65_RS01880 at 412.717 kb on - strand, within DZA65_RS01880 at 412.717 kb on - strand, within DZA65_RS01880 at 412.814 kb on + strand, within DZA65_RS01880 at 412.814 kb on + strand, within DZA65_RS01880 at 412.814 kb on + strand, within DZA65_RS01880 at 412.815 kb on - strand, within DZA65_RS01880 at 412.815 kb on - strand, within DZA65_RS01880 at 412.815 kb on - strand, within DZA65_RS01880 at 412.815 kb on - strand, within DZA65_RS01880 at 412.815 kb on - strand, within DZA65_RS01880 at 412.817 kb on + strand, within DZA65_RS01880 at 412.908 kb on - strand, within DZA65_RS01880 at 412.908 kb on - strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.063 kb on + strand, within DZA65_RS01880 at 413.064 kb on - strand, within DZA65_RS01880 at 413.064 kb on - strand, within DZA65_RS01880 at 413.131 kb on + strand, within DZA65_RS01880 at 413.131 kb on + strand, within DZA65_RS01880 at 413.151 kb on + strand, within DZA65_RS01880 at 413.151 kb on + strand, within DZA65_RS01880 at 413.151 kb on + strand, within DZA65_RS01880 at 413.152 kb on - strand, within DZA65_RS01880 at 413.152 kb on - strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.153 kb on + strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.154 kb on - strand, within DZA65_RS01880 at 413.158 kb on + strand, within DZA65_RS01880 at 413.158 kb on + strand, within DZA65_RS01880 at 413.158 kb on + strand, within DZA65_RS01880 at 413.158 kb on + strand, within DZA65_RS01880 at 413.159 kb on - strand, within DZA65_RS01880 at 413.159 kb on - strand, within DZA65_RS01880 at 413.161 kb on - strand, within DZA65_RS01880 at 413.161 kb on - strand, within DZA65_RS01880 at 413.180 kb on - strand, within DZA65_RS01880
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 410,836 + -0.6 410,847 + +0.1 410,847 + +1.6 410,847 + +0.5 410,847 + -0.6 410,848 - -0.4 410,848 - +0.1 410,849 + -0.5 410,849 + -0.7 410,849 + +0.2 410,849 + +0.7 410,849 + +0.0 410,849 + +0.7 410,849 + -0.7 410,849 + +0.1 410,849 + +1.0 410,849 + +2.9 410,849 + +0.9 410,850 - +1.3 410,850 - +0.4 410,850 - -1.7 410,850 - +1.5 410,850 - -0.5 410,850 - +0.5 410,850 - -1.4 410,850 - +0.1 410,850 - -0.3 410,850 - -0.3 410,850 - -0.9 410,850 - -0.2 410,850 - +0.5 410,850 - +1.0 410,850 - -1.0 410,850 - -0.3 410,850 - -1.4 410,850 - +0.6 410,850 - +0.7 410,850 - +0.7 410,850 - -2.2 410,851 + +0.3 410,851 + +0.3 410,852 - +0.5 410,852 - -0.3 410,852 - -1.4 410,852 - -0.3 410,874 + +0.4 410,874 + +0.3 410,874 + +0.7 410,874 + +0.3 410,874 + -0.6 410,874 + -0.8 410,875 - +0.5 410,875 - -2.1 410,880 - -0.1 410,880 - -0.7 410,880 - +1.5 410,928 - +0.0 410,961 + +0.6 410,962 - -0.1 410,970 - -0.7 411,027 - -2.5 411,046 + +0.3 411,047 - -1.4 411,047 - -1.5 411,155 + +0.1 411,177 + +1.4 411,177 + +0.7 411,177 + +0.9 411,177 + -0.9 411,177 + -2.2 411,178 - +0.5 411,178 - -1.1 411,178 - +0.8 411,178 - -1.4 411,178 - -1.0 411,178 - -1.5 411,178 - -0.5 411,178 - +0.5 411,227 - +0.4 411,267 + +0.6 411,268 - +0.3 411,289 + -0.2 411,290 - +1.6 411,341 + DZA65_RS01870 0.19 +1.3 411,341 + DZA65_RS01870 0.19 +0.3 411,341 + DZA65_RS01870 0.19 +0.5 411,341 + DZA65_RS01870 0.19 -0.3 411,342 - DZA65_RS01870 0.20 -1.0 411,342 - DZA65_RS01870 0.20 -0.5 411,351 + DZA65_RS01870 0.22 -0.7 411,362 - DZA65_RS01870 0.24 +1.4 411,362 - DZA65_RS01870 0.24 -1.5 411,362 - DZA65_RS01870 0.24 -0.7 411,391 + DZA65_RS01870 0.30 +0.8 411,391 + DZA65_RS01870 0.30 +0.6 411,562 + DZA65_RS01870 0.68 -1.7 411,563 - DZA65_RS01870 0.68 -0.1 411,563 - DZA65_RS01870 0.68 +0.6 411,564 + DZA65_RS01870 0.69 -0.6 411,565 - DZA65_RS01870 0.69 +0.5 411,565 - DZA65_RS01870 0.69 -0.2 411,565 - DZA65_RS01870 0.69 +1.3 411,684 + +0.3 411,684 + -0.1 411,684 + +1.8 411,735 - -0.3 411,735 - -1.3 411,735 - -1.6 411,770 + +1.3 411,770 + +0.4 411,771 - -0.3 411,771 - -0.3 411,771 - -0.7 411,771 - +0.4 411,771 - +0.3 412,194 + DZA65_RS01875 0.78 -0.6 412,194 + DZA65_RS01875 0.78 -1.3 412,194 + DZA65_RS01875 0.78 -1.0 412,194 + DZA65_RS01875 0.78 -1.1 412,194 + DZA65_RS01875 0.78 -0.4 412,194 + DZA65_RS01875 0.78 -0.4 412,195 - DZA65_RS01875 0.78 -0.6 412,195 - DZA65_RS01875 0.78 -1.5 412,195 - DZA65_RS01875 0.78 -0.2 412,237 + DZA65_RS01875 0.88 -0.7 412,237 + DZA65_RS01875 0.88 +0.1 412,237 + DZA65_RS01875 0.88 +0.1 412,237 + DZA65_RS01875 0.88 +1.1 412,237 + DZA65_RS01875 0.88 -0.7 412,237 + DZA65_RS01875 0.88 -1.7 412,237 + DZA65_RS01875 0.88 -1.4 412,237 + DZA65_RS01875 0.88 -0.9 412,238 - DZA65_RS01875 0.88 +0.6 412,238 - DZA65_RS01875 0.88 -2.3 412,238 - DZA65_RS01875 0.88 +2.0 412,278 + -1.2 412,278 + -0.2 412,278 + -0.0 412,278 + -1.0 412,278 + -0.9 412,278 + -0.6 412,279 - +1.3 412,279 - -0.5 412,279 - -2.2 412,279 - +0.1 412,287 + +0.9 412,287 + +0.7 412,287 + +0.9 412,287 + +0.5 412,287 + +0.1 412,287 + -0.5 412,287 + +0.7 412,288 - +0.7 412,288 - +0.6 412,288 - -1.0 412,288 - -0.2 412,288 - +1.0 412,288 - -1.0 412,288 - +0.9 412,288 - -0.5 412,294 + -1.2 412,551 + -0.7 412,551 + -0.6 412,552 - +0.3 412,599 - +0.7 412,599 - -1.2 412,629 - -0.3 412,631 + DZA65_RS01880 0.11 -0.1 412,632 - DZA65_RS01880 0.11 +1.9 412,646 + DZA65_RS01880 0.12 -0.5 412,646 + DZA65_RS01880 0.12 +1.8 412,646 + DZA65_RS01880 0.12 +0.4 412,646 + DZA65_RS01880 0.12 -1.4 412,646 + DZA65_RS01880 0.12 -1.0 412,652 + DZA65_RS01880 0.12 +1.0 412,653 - DZA65_RS01880 0.12 +0.3 412,653 - DZA65_RS01880 0.12 -0.3 412,653 - DZA65_RS01880 0.12 -0.0 412,653 - DZA65_RS01880 0.12 +0.8 412,660 + DZA65_RS01880 0.12 -1.3 412,661 - DZA65_RS01880 0.13 +0.3 412,661 - DZA65_RS01880 0.13 -0.5 412,661 - DZA65_RS01880 0.13 -2.2 412,661 - DZA65_RS01880 0.13 -0.7 412,701 - DZA65_RS01880 0.14 -0.1 412,716 + DZA65_RS01880 0.15 -0.0 412,716 + DZA65_RS01880 0.15 +0.4 412,717 - DZA65_RS01880 0.15 -1.3 412,717 - DZA65_RS01880 0.15 -0.4 412,814 + DZA65_RS01880 0.20 +0.9 412,814 + DZA65_RS01880 0.20 -1.2 412,814 + DZA65_RS01880 0.20 +1.1 412,815 - DZA65_RS01880 0.20 +0.3 412,815 - DZA65_RS01880 0.20 -0.9 412,815 - DZA65_RS01880 0.20 +0.3 412,815 - DZA65_RS01880 0.20 -0.7 412,815 - DZA65_RS01880 0.20 -0.8 412,817 + DZA65_RS01880 0.20 -1.3 412,908 - DZA65_RS01880 0.24 +1.3 412,908 - DZA65_RS01880 0.24 +0.3 413,063 + DZA65_RS01880 0.31 +0.2 413,063 + DZA65_RS01880 0.31 +1.3 413,063 + DZA65_RS01880 0.31 +0.5 413,063 + DZA65_RS01880 0.31 -0.8 413,063 + DZA65_RS01880 0.31 +0.8 413,063 + DZA65_RS01880 0.31 +0.6 413,063 + DZA65_RS01880 0.31 +1.0 413,063 + DZA65_RS01880 0.31 -0.9 413,064 - DZA65_RS01880 0.31 -0.6 413,064 - DZA65_RS01880 0.31 -2.2 413,131 + DZA65_RS01880 0.35 +0.1 413,131 + DZA65_RS01880 0.35 -0.5 413,151 + DZA65_RS01880 0.35 -0.2 413,151 + DZA65_RS01880 0.35 -0.2 413,151 + DZA65_RS01880 0.35 +1.1 413,152 - DZA65_RS01880 0.35 +0.6 413,152 - DZA65_RS01880 0.35 -0.7 413,153 + DZA65_RS01880 0.36 -0.4 413,153 + DZA65_RS01880 0.36 -0.2 413,153 + DZA65_RS01880 0.36 -1.5 413,153 + DZA65_RS01880 0.36 -0.5 413,153 + DZA65_RS01880 0.36 +0.5 413,153 + DZA65_RS01880 0.36 +0.7 413,153 + DZA65_RS01880 0.36 -0.2 413,153 + DZA65_RS01880 0.36 -0.9 413,153 + DZA65_RS01880 0.36 +0.6 413,153 + DZA65_RS01880 0.36 +1.1 413,153 + DZA65_RS01880 0.36 +1.0 413,153 + DZA65_RS01880 0.36 +0.4 413,153 + DZA65_RS01880 0.36 -0.4 413,153 + DZA65_RS01880 0.36 +0.0 413,154 - DZA65_RS01880 0.36 +0.2 413,154 - DZA65_RS01880 0.36 -0.6 413,154 - DZA65_RS01880 0.36 -2.2 413,154 - DZA65_RS01880 0.36 -0.1 413,154 - DZA65_RS01880 0.36 +0.3 413,154 - DZA65_RS01880 0.36 +0.1 413,154 - DZA65_RS01880 0.36 -0.0 413,154 - DZA65_RS01880 0.36 -1.0 413,154 - DZA65_RS01880 0.36 +0.6 413,158 + DZA65_RS01880 0.36 -0.7 413,158 + DZA65_RS01880 0.36 -0.1 413,158 + DZA65_RS01880 0.36 +1.6 413,158 + DZA65_RS01880 0.36 +0.7 413,159 - DZA65_RS01880 0.36 +0.1 413,159 - DZA65_RS01880 0.36 -1.8 413,161 - DZA65_RS01880 0.36 +1.3 413,161 - DZA65_RS01880 0.36 -0.8 413,180 - DZA65_RS01880 0.37 -0.3
Or see this region's nucleotide sequence