Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS22415 and DZA65_RS22420 are separated by 221 nucleotides DZA65_RS22420 and DZA65_RS22425 are separated by 229 nucleotides
DZA65_RS22415: DZA65_RS22415 - right-handed parallel beta-helix repeat-containing protein, at 4,847,282 to 4,849,486
_RS22415
DZA65_RS22420: DZA65_RS22420 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 4,849,708 to 4,851,078
_RS22420
DZA65_RS22425: DZA65_RS22425 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 4,851,308 to 4,853,143
_RS22425
Position (kb)
4849
4850
4851
4852 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.708 kb on + strand, within DZA65_RS22415 at 4848.709 kb on - strand, within DZA65_RS22415 at 4848.709 kb on - strand, within DZA65_RS22415 at 4848.709 kb on - strand, within DZA65_RS22415 at 4848.709 kb on - strand at 4848.709 kb on - strand, within DZA65_RS22415 at 4848.789 kb on + strand, within DZA65_RS22415 at 4848.790 kb on - strand, within DZA65_RS22415 at 4848.870 kb on + strand, within DZA65_RS22415 at 4848.871 kb on - strand, within DZA65_RS22415 at 4848.871 kb on - strand, within DZA65_RS22415 at 4848.968 kb on - strand, within DZA65_RS22415 at 4848.968 kb on - strand, within DZA65_RS22415 at 4849.023 kb on + strand, within DZA65_RS22415 at 4849.024 kb on - strand, within DZA65_RS22415 at 4849.210 kb on + strand, within DZA65_RS22415 at 4849.210 kb on + strand, within DZA65_RS22415 at 4849.211 kb on - strand, within DZA65_RS22415 at 4849.211 kb on - strand, within DZA65_RS22415 at 4849.211 kb on - strand, within DZA65_RS22415 at 4849.244 kb on - strand, within DZA65_RS22415 at 4849.244 kb on - strand, within DZA65_RS22415 at 4849.274 kb on + strand at 4849.274 kb on + strand at 4849.275 kb on - strand at 4849.447 kb on + strand at 4849.447 kb on + strand at 4849.448 kb on - strand at 4849.460 kb on + strand at 4849.460 kb on + strand at 4849.460 kb on + strand at 4849.461 kb on - strand at 4849.461 kb on - strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.479 kb on + strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.480 kb on - strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.501 kb on + strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.502 kb on - strand at 4849.523 kb on + strand at 4849.523 kb on + strand at 4849.523 kb on + strand at 4849.523 kb on + strand at 4849.523 kb on + strand at 4849.523 kb on + strand at 4849.524 kb on - strand at 4849.524 kb on - strand at 4849.554 kb on + strand at 4849.570 kb on + strand at 4849.607 kb on - strand at 4849.627 kb on + strand at 4849.627 kb on + strand at 4849.627 kb on + strand at 4849.627 kb on + strand at 4849.627 kb on + strand at 4849.627 kb on + strand at 4849.628 kb on - strand at 4849.628 kb on - strand at 4849.628 kb on - strand at 4849.628 kb on - strand at 4849.628 kb on - strand at 4849.630 kb on + strand at 4849.630 kb on + strand at 4849.630 kb on + strand at 4849.631 kb on - strand at 4849.631 kb on - strand at 4849.631 kb on - strand at 4849.652 kb on + strand at 4851.076 kb on + strand at 4851.077 kb on - strand at 4851.082 kb on + strand at 4851.083 kb on - strand at 4851.140 kb on + strand at 4851.140 kb on + strand at 4851.141 kb on - strand at 4851.141 kb on - strand at 4851.154 kb on + strand at 4851.154 kb on + strand at 4851.154 kb on + strand at 4851.154 kb on + strand at 4851.154 kb on + strand at 4851.154 kb on + strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.155 kb on - strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.201 kb on + strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.202 kb on - strand at 4851.204 kb on + strand at 4851.205 kb on - strand at 4851.218 kb on - strand at 4851.250 kb on + strand at 4851.250 kb on + strand at 4851.250 kb on + strand at 4851.260 kb on + strand at 4851.260 kb on + strand at 4851.260 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.282 kb on + strand at 4851.283 kb on - strand at 4851.283 kb on - strand at 4851.283 kb on - strand at 4851.283 kb on - strand at 4851.283 kb on - strand at 4851.293 kb on + strand at 4851.293 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,848,708 + DZA65_RS22415 0.65 +0.5 4,848,708 + DZA65_RS22415 0.65 -1.5 4,848,708 + DZA65_RS22415 0.65 +0.4 4,848,708 + DZA65_RS22415 0.65 -1.1 4,848,708 + DZA65_RS22415 0.65 +1.1 4,848,708 + DZA65_RS22415 0.65 +0.8 4,848,708 + DZA65_RS22415 0.65 +0.1 4,848,708 + DZA65_RS22415 0.65 +1.1 4,848,708 + DZA65_RS22415 0.65 -0.1 4,848,708 + DZA65_RS22415 0.65 +0.7 4,848,709 - DZA65_RS22415 0.65 -0.9 4,848,709 - DZA65_RS22415 0.65 +0.2 4,848,709 - DZA65_RS22415 0.65 -0.5 4,848,709 - +0.1 4,848,709 - DZA65_RS22415 0.65 +0.5 4,848,789 + DZA65_RS22415 0.68 +0.4 4,848,790 - DZA65_RS22415 0.68 -0.5 4,848,870 + DZA65_RS22415 0.72 -0.5 4,848,871 - DZA65_RS22415 0.72 +0.7 4,848,871 - DZA65_RS22415 0.72 +0.1 4,848,968 - DZA65_RS22415 0.76 -0.6 4,848,968 - DZA65_RS22415 0.76 -0.6 4,849,023 + DZA65_RS22415 0.79 +0.9 4,849,024 - DZA65_RS22415 0.79 -1.5 4,849,210 + DZA65_RS22415 0.87 -0.5 4,849,210 + DZA65_RS22415 0.87 +0.1 4,849,211 - DZA65_RS22415 0.87 +0.7 4,849,211 - DZA65_RS22415 0.87 +1.4 4,849,211 - DZA65_RS22415 0.87 -0.2 4,849,244 - DZA65_RS22415 0.89 +1.8 4,849,244 - DZA65_RS22415 0.89 +0.3 4,849,274 + -2.1 4,849,274 + -0.5 4,849,275 - +1.3 4,849,447 + +1.1 4,849,447 + +1.7 4,849,448 - +0.3 4,849,460 + -1.6 4,849,460 + +0.7 4,849,460 + +0.8 4,849,461 - +1.1 4,849,461 - +0.2 4,849,479 + +1.1 4,849,479 + +1.4 4,849,479 + +1.0 4,849,479 + -0.3 4,849,479 + -1.0 4,849,479 + -0.9 4,849,479 + +1.9 4,849,479 + +1.6 4,849,479 + +1.1 4,849,479 + -0.0 4,849,479 + +0.4 4,849,479 + -1.1 4,849,479 + -1.1 4,849,480 - -0.0 4,849,480 - +0.5 4,849,480 - -0.1 4,849,480 - -0.0 4,849,480 - -0.5 4,849,480 - +0.2 4,849,480 - -0.4 4,849,480 - +0.1 4,849,480 - -0.5 4,849,480 - +2.1 4,849,480 - +0.1 4,849,480 - +0.7 4,849,480 - -0.2 4,849,480 - +1.8 4,849,480 - +0.4 4,849,480 - -0.9 4,849,480 - +0.3 4,849,480 - +1.1 4,849,480 - +0.3 4,849,501 + +0.1 4,849,501 + +0.2 4,849,501 + +0.5 4,849,501 + -1.1 4,849,501 + +0.3 4,849,501 + -0.1 4,849,501 + +0.5 4,849,501 + -1.9 4,849,502 - +0.5 4,849,502 - +0.5 4,849,502 - +0.5 4,849,502 - -0.5 4,849,502 - +0.2 4,849,502 - -0.5 4,849,502 - +0.1 4,849,502 - -0.2 4,849,502 - -1.5 4,849,502 - +1.4 4,849,502 - -0.1 4,849,502 - -0.7 4,849,502 - -1.2 4,849,502 - -0.9 4,849,502 - -0.8 4,849,502 - +0.2 4,849,502 - +0.9 4,849,502 - -1.1 4,849,502 - -1.5 4,849,502 - +1.1 4,849,523 + +0.4 4,849,523 + -0.5 4,849,523 + -0.4 4,849,523 + +3.3 4,849,523 + -0.1 4,849,523 + -0.1 4,849,524 - -1.0 4,849,524 - -0.5 4,849,554 + +0.8 4,849,570 + -2.2 4,849,607 - -0.5 4,849,627 + +0.3 4,849,627 + -1.1 4,849,627 + -0.9 4,849,627 + -0.2 4,849,627 + +0.9 4,849,627 + -0.6 4,849,628 - -0.0 4,849,628 - +0.3 4,849,628 - +0.7 4,849,628 - -0.3 4,849,628 - +0.5 4,849,630 + +1.1 4,849,630 + +0.1 4,849,630 + -1.9 4,849,631 - +1.3 4,849,631 - -0.2 4,849,631 - -0.1 4,849,652 + -0.7 4,851,076 + +1.1 4,851,077 - +1.4 4,851,082 + +0.1 4,851,083 - -0.6 4,851,140 + +0.1 4,851,140 + +0.2 4,851,141 - +0.4 4,851,141 - -0.3 4,851,154 + +1.1 4,851,154 + +0.9 4,851,154 + -1.4 4,851,154 + +0.4 4,851,154 + +0.1 4,851,154 + -1.0 4,851,155 - -0.4 4,851,155 - -1.3 4,851,155 - -0.1 4,851,155 - -0.1 4,851,155 - -0.5 4,851,155 - +1.1 4,851,155 - -0.1 4,851,155 - -0.3 4,851,201 + +0.0 4,851,201 + +0.7 4,851,201 + -1.1 4,851,201 + +0.2 4,851,201 + +0.0 4,851,201 + +1.2 4,851,201 + -1.5 4,851,201 + +0.7 4,851,202 - -0.5 4,851,202 - +0.3 4,851,202 - +0.8 4,851,202 - +0.1 4,851,202 - -0.6 4,851,202 - +0.1 4,851,202 - +0.6 4,851,202 - +0.2 4,851,204 + -1.2 4,851,205 - +2.0 4,851,218 - +0.8 4,851,250 + -1.7 4,851,250 + -1.5 4,851,250 + +0.1 4,851,260 + +2.7 4,851,260 + +0.2 4,851,260 + -0.1 4,851,282 + -1.7 4,851,282 + +0.4 4,851,282 + -0.7 4,851,282 + -0.5 4,851,282 + -0.2 4,851,282 + +0.5 4,851,282 + -0.2 4,851,282 + -1.0 4,851,282 + +0.1 4,851,282 + -1.5 4,851,282 + +0.7 4,851,282 + +0.7 4,851,282 + +1.3 4,851,282 + -0.6 4,851,282 + +0.1 4,851,282 + -1.2 4,851,282 + +1.1 4,851,282 + +1.8 4,851,282 + -1.7 4,851,282 + -0.5 4,851,282 + -0.8 4,851,282 + +0.1 4,851,283 - +1.1 4,851,283 - -1.7 4,851,283 - +1.1 4,851,283 - -0.3 4,851,283 - -1.1 4,851,293 + -2.5 4,851,293 + -2.5
Or see this region's nucleotide sequence