Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21015

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,542,910	+		DZA65_RS21010	0.26	-0.3
4,542,910	+		DZA65_RS21010	0.26	-0.5
4,542,910	+		DZA65_RS21010	0.26	+0.3
4,542,911	-		DZA65_RS21010	0.26	+1.2
4,542,956	+		DZA65_RS21010	0.30	+0.4
4,542,956	+		DZA65_RS21010	0.30	+0.2
4,542,957	-		DZA65_RS21010	0.30	-0.1
4,542,957	-		DZA65_RS21010	0.30	+0.0
4,542,957	-		DZA65_RS21010	0.30	-0.6
4,542,957	-		DZA65_RS21010	0.30	-0.4
4,543,097	-		DZA65_RS21010	0.41	+1.3
4,543,345	+		DZA65_RS21010	0.61	-0.3
4,543,345	+		DZA65_RS21010	0.61	+0.1
4,543,346	-		DZA65_RS21010	0.61	+0.6
4,543,346	-		DZA65_RS21010	0.61	-0.2
4,543,346	-		DZA65_RS21010	0.61	-0.5
4,543,346	-		DZA65_RS21010	0.61	+0.6
4,543,346	-		DZA65_RS21010	0.61	-2.9
4,543,346	-		DZA65_RS21010	0.61	-1.0
4,543,346	-		DZA65_RS21010	0.61	+1.5
4,543,380	+		DZA65_RS21010	0.64	-0.4
4,543,381	-		DZA65_RS21010	0.64	+2.9
4,543,583	-		DZA65_RS21010	0.80	-1.1
4,543,583	-		DZA65_RS21010	0.80	-0.5
4,543,600	-		DZA65_RS21010	0.81	-0.1
4,543,607	+		DZA65_RS21010	0.82	+0.2
4,543,607	+		DZA65_RS21010	0.82	-0.4
4,543,607	+		DZA65_RS21010	0.82	-2.1
4,543,607	+		DZA65_RS21010	0.82	+0.7
4,543,608	-		DZA65_RS21010	0.82	-0.8
4,543,608	-		DZA65_RS21010	0.82	-0.7
4,543,608	-		DZA65_RS21010	0.82	-0.5
4,543,608	-		DZA65_RS21010	0.82	-0.1
4,543,826	+				-1.1
4,543,827	-				-0.3
4,543,881	+				+0.5
4,543,881	+				-0.1
4,543,881	+				+1.1
4,543,882	-				-0.7
4,543,894	+				+0.8
4,543,895	-				+0.5
4,543,895	-				-0.7
4,543,895	-				+1.1
4,544,112	-		DZA65_RS21015	0.18	+0.5
4,544,357	+		DZA65_RS21015	0.32	-1.9
4,544,357	+		DZA65_RS21015	0.32	+0.3
4,544,357	+		DZA65_RS21015	0.32	-0.3
4,544,357	+		DZA65_RS21015	0.32	-0.6
4,544,358	-		DZA65_RS21015	0.33	-0.5
4,544,391	+		DZA65_RS21015	0.35	-3.0
4,544,391	+		DZA65_RS21015	0.35	+1.1
4,544,392	-		DZA65_RS21015	0.35	+0.1
4,544,501	-		DZA65_RS21015	0.41	+0.5
4,544,532	+		DZA65_RS21015	0.43	-0.3
4,544,532	+		DZA65_RS21015	0.43	+0.0
4,544,640	+		DZA65_RS21015	0.50	+0.1
4,544,641	-		DZA65_RS21015	0.50	+0.2
4,544,641	-		DZA65_RS21015	0.50	+0.8
4,544,797	+		DZA65_RS21015	0.59	-0.4
4,544,797	+		DZA65_RS21015	0.59	+1.1
4,544,798	-		DZA65_RS21015	0.59	+0.3
4,544,808	+		DZA65_RS21015	0.60	+0.8
4,544,809	-		DZA65_RS21015	0.60	+0.4
4,544,862	+		DZA65_RS21015	0.63	-1.5
4,544,862	+		DZA65_RS21015	0.63	-0.0
4,544,862	+		DZA65_RS21015	0.63	+0.8
4,544,863	-		DZA65_RS21015	0.63	+0.9
4,544,952	+		DZA65_RS21015	0.69	+0.1
4,544,952	+		DZA65_RS21015	0.69	+0.3
4,544,953	-		DZA65_RS21015	0.69	+1.9
4,544,953	-		DZA65_RS21015	0.69	-0.0
4,544,953	-		DZA65_RS21015	0.69	+1.3
4,544,992	+		DZA65_RS21015	0.71	-0.4
4,544,992	+		DZA65_RS21015	0.71	-0.7
4,544,992	+		DZA65_RS21015	0.71	-0.9
4,544,992	+		DZA65_RS21015	0.71	-0.1
4,544,992	+		DZA65_RS21015	0.71	-0.3
4,544,993	-		DZA65_RS21015	0.71	+0.2
4,544,993	-		DZA65_RS21015	0.71	-0.8
4,544,993	-		DZA65_RS21015	0.71	+0.2
4,544,993	-		DZA65_RS21015	0.71	-0.7
4,545,156	+		DZA65_RS21015	0.81	-0.3
4,545,156	+		DZA65_RS21015	0.81	-0.6
4,545,156	+		DZA65_RS21015	0.81	+0.1
4,545,156	+		DZA65_RS21015	0.81	+0.2
4,545,157	-		DZA65_RS21015	0.81	+0.6
4,545,157	-		DZA65_RS21015	0.81	-0.6
4,545,157	-		DZA65_RS21015	0.81	-1.4
4,545,157	-		DZA65_RS21015	0.81	-0.9
4,545,157	-		DZA65_RS21015	0.81	+0.3
4,545,157	-				-0.5
4,545,157	-		DZA65_RS21015	0.81	-1.0
4,545,157	-		DZA65_RS21015	0.81	+0.8
4,545,160	+		DZA65_RS21015	0.81	-1.1
4,545,160	+		DZA65_RS21015	0.81	-2.3
4,545,160	+		DZA65_RS21015	0.81	+0.1
4,545,160	+		DZA65_RS21015	0.81	+1.2
4,545,160	+		DZA65_RS21015	0.81	-2.0
4,545,160	+		DZA65_RS21015	0.81	+0.3
4,545,160	+		DZA65_RS21015	0.81	-1.5
4,545,161	-		DZA65_RS21015	0.81	-2.4
4,545,161	-		DZA65_RS21015	0.81	-2.5
4,545,161	-		DZA65_RS21015	0.81	-0.2
4,545,161	-		DZA65_RS21015	0.81	-1.5
4,545,161	-		DZA65_RS21015	0.81	+0.3
4,545,161	-		DZA65_RS21015	0.81	+0.1
4,545,161	-		DZA65_RS21015	0.81	+0.1
4,545,161	-		DZA65_RS21015	0.81	+0.4
4,545,161	-		DZA65_RS21015	0.81	+0.7
4,545,161	-		DZA65_RS21015	0.81	-0.5
4,545,161	-		DZA65_RS21015	0.81	-0.7
4,545,317	-				+0.1
4,545,369	-				-0.9
4,545,468	-				+0.9
4,545,502	+				+0.7
4,545,502	+				+1.1
4,545,503	-				-1.4
4,545,512	+				+0.8
4,545,512	+				+0.5
4,545,512	+				+0.6
4,545,513	-				-1.0
4,545,535	+				+0.3
4,545,576	+				+0.7
4,545,576	+				+1.1
4,545,576	+				+0.5
4,545,588	+				-1.4
4,545,588	+				+0.4
4,545,638	-				-1.5
4,545,704	+				-0.6
4,545,704	+				-0.9
4,545,737	+				-2.0
4,545,737	+				-0.0
4,545,737	+				-1.7
4,545,737	+				-0.5
4,545,738	-				+1.2
4,545,744	+				+0.2
4,545,744	+				+0.7
4,545,744	+				-0.5
4,545,744	+				-1.5
4,545,744	+				+0.7
4,545,745	-				-1.6
4,545,745	-				-0.7
4,545,762	+				+1.3
4,545,763	-				-2.4
4,545,763	-				+0.4
4,545,763	-				-0.3
4,545,763	-				+0.3
4,545,766	+				+1.5
4,545,766	+				-0.4
4,545,766	+				+1.1
4,545,767	-				+0.9
4,545,767	-				-2.4
4,545,767	-				-2.6
4,545,767	-				+0.9
4,545,775	+				+0.1
4,545,887	+				+1.4
4,545,887	+				-0.5
4,545,888	-				+0.8
4,545,888	-				+0.8
4,545,890	+				-0.1
4,545,890	+				+1.5
4,545,890	+				-0.1
4,545,891	-				-0.4
4,545,891	-				-0.4
4,545,891	-				+1.1
4,545,891	-				+1.4
4,545,891	-				+0.1
4,545,891	-				-0.5
4,545,891	-				-0.5
4,545,891	-				+0.7
4,545,891	-				+0.1
4,545,891	-				+0.5
4,545,891	-				+0.2
4,545,926	+		DZA65_RS21020	0.12	-0.0
4,545,927	-		DZA65_RS21020	0.12	-0.1
4,545,927	-		DZA65_RS21020	0.12	+0.4
4,545,927	-		DZA65_RS21020	0.12	+0.9
4,545,927	-		DZA65_RS21020	0.12	+0.6
4,545,934	-		DZA65_RS21020	0.12	-0.0
4,546,047	+		DZA65_RS21020	0.21	+0.6
4,546,047	+		DZA65_RS21020	0.21	+0.8
4,546,048	-		DZA65_RS21020	0.21	-0.1
4,546,094	-		DZA65_RS21020	0.24	-2.3
4,546,337	+		DZA65_RS21020	0.42	+0.1
4,546,337	+		DZA65_RS21020	0.42	-2.1
4,546,337	+		DZA65_RS21020	0.42	+0.1
4,546,337	+		DZA65_RS21020	0.42	+1.1
4,546,337	+				+1.1
4,546,337	+		DZA65_RS21020	0.42	+0.0
4,546,337	+		DZA65_RS21020	0.42	-1.0
4,546,337	+		DZA65_RS21020	0.42	+1.3
4,546,337	+		DZA65_RS21020	0.42	-1.1
4,546,337	+		DZA65_RS21020	0.42	-2.3
4,546,337	+		DZA65_RS21020	0.42	+0.2
4,546,337	+		DZA65_RS21020	0.42	+0.1
4,546,337	+		DZA65_RS21020	0.42	+2.6
4,546,337	+		DZA65_RS21020	0.42	-0.2
4,546,338	-		DZA65_RS21020	0.42	-0.4
4,546,338	-		DZA65_RS21020	0.42	+1.3
4,546,338	-		DZA65_RS21020	0.42	-0.5
4,546,338	-		DZA65_RS21020	0.42	-1.6
4,546,338	-		DZA65_RS21020	0.42	+0.6
4,546,338	-		DZA65_RS21020	0.42	-2.1
4,546,338	-		DZA65_RS21020	0.42	+0.3
4,546,338	-		DZA65_RS21020	0.42	-0.9
4,546,338	-		DZA65_RS21020	0.42	-0.2
4,546,338	-		DZA65_RS21020	0.42	+0.2
4,546,338	-		DZA65_RS21020	0.42	-2.2
4,546,338	-		DZA65_RS21020	0.42	+0.9
4,546,338	-		DZA65_RS21020	0.42	+0.2
4,546,339	+		DZA65_RS21020	0.42	+0.1
4,546,340	-		DZA65_RS21020	0.42	+0.1
4,546,433	+				+0.1
4,546,457	+		DZA65_RS21020	0.51	+0.1
4,546,457	+		DZA65_RS21020	0.51	-1.4
4,546,457	+		DZA65_RS21020	0.51	-1.3
4,546,457	+		DZA65_RS21020	0.51	+0.6
4,546,458	-		DZA65_RS21020	0.51	-0.5
4,546,458	-		DZA65_RS21020	0.51	+0.1
4,546,460	-		DZA65_RS21020	0.51	+0.3
4,546,460	-		DZA65_RS21020	0.51	+1.1