Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS20750 and DZA65_RS20755 are separated by 76 nucleotides DZA65_RS20755 and DZA65_RS20760 are separated by 135 nucleotides
DZA65_RS20750: DZA65_RS20750 - adenine-specific DNA-methyltransferase, at 4,477,189 to 4,478,016
_RS20750
DZA65_RS20755: DZA65_RS20755 - SPOR domain-containing protein, at 4,478,093 to 4,479,145
_RS20755
DZA65_RS20760: DZA65_RS20760 - 3-dehydroquinate synthase, at 4,479,281 to 4,480,366
_RS20760
Position (kb)
4478
4479
4480 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4477.098 kb on + strand at 4477.099 kb on - strand at 4477.099 kb on - strand at 4477.105 kb on + strand at 4477.105 kb on + strand at 4477.146 kb on + strand at 4477.146 kb on + strand at 4477.146 kb on + strand at 4477.146 kb on + strand at 4477.146 kb on + strand at 4477.147 kb on - strand at 4477.147 kb on - strand at 4477.147 kb on - strand at 4478.030 kb on - strand at 4478.030 kb on - strand at 4478.030 kb on - strand at 4478.058 kb on - strand at 4478.058 kb on - strand at 4478.058 kb on - strand at 4478.065 kb on + strand at 4478.065 kb on + strand at 4478.066 kb on - strand at 4478.095 kb on - strand at 4478.095 kb on - strand at 4478.095 kb on - strand at 4478.095 kb on - strand at 4478.095 kb on - strand at 4478.177 kb on - strand at 4478.177 kb on - strand at 4478.177 kb on - strand at 4478.177 kb on - strand at 4478.206 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.227 kb on - strand, within DZA65_RS20755 at 4478.256 kb on - strand, within DZA65_RS20755 at 4478.257 kb on - strand, within DZA65_RS20755 at 4478.257 kb on - strand, within DZA65_RS20755 at 4478.257 kb on - strand, within DZA65_RS20755 at 4478.257 kb on - strand, within DZA65_RS20755 at 4478.257 kb on - strand, within DZA65_RS20755 at 4478.259 kb on - strand, within DZA65_RS20755 at 4478.259 kb on - strand, within DZA65_RS20755 at 4478.259 kb on - strand, within DZA65_RS20755 at 4478.259 kb on - strand, within DZA65_RS20755 at 4478.266 kb on - strand, within DZA65_RS20755 at 4478.266 kb on - strand, within DZA65_RS20755 at 4478.266 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.293 kb on - strand, within DZA65_RS20755 at 4478.339 kb on - strand, within DZA65_RS20755 at 4478.339 kb on - strand at 4478.453 kb on - strand, within DZA65_RS20755 at 4478.453 kb on - strand, within DZA65_RS20755 at 4478.453 kb on - strand, within DZA65_RS20755 at 4478.453 kb on - strand, within DZA65_RS20755 at 4478.513 kb on - strand, within DZA65_RS20755 at 4478.690 kb on - strand, within DZA65_RS20755 at 4478.690 kb on - strand, within DZA65_RS20755 at 4478.690 kb on - strand, within DZA65_RS20755 at 4478.690 kb on - strand, within DZA65_RS20755 at 4478.708 kb on - strand, within DZA65_RS20755 at 4478.885 kb on - strand, within DZA65_RS20755 at 4478.885 kb on - strand, within DZA65_RS20755 at 4478.885 kb on - strand, within DZA65_RS20755 at 4478.945 kb on - strand, within DZA65_RS20755 at 4479.169 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,477,098 + -0.6 4,477,099 - +0.7 4,477,099 - -0.2 4,477,105 + +1.8 4,477,105 + -0.8 4,477,146 + -1.1 4,477,146 + +0.3 4,477,146 + -0.7 4,477,146 + +0.7 4,477,146 + -0.3 4,477,147 - -0.2 4,477,147 - +0.8 4,477,147 - +1.0 4,478,030 - +0.5 4,478,030 - -1.2 4,478,030 - +0.7 4,478,058 - +1.0 4,478,058 - -1.0 4,478,058 - +1.0 4,478,065 + +0.8 4,478,065 + +0.2 4,478,066 - +0.4 4,478,095 - +1.6 4,478,095 - +0.4 4,478,095 - +0.8 4,478,095 - +0.3 4,478,095 - +0.3 4,478,177 - +1.6 4,478,177 - +3.0 4,478,177 - +1.5 4,478,177 - +1.5 4,478,206 - DZA65_RS20755 0.11 +0.9 4,478,227 - DZA65_RS20755 0.13 +0.1 4,478,227 - DZA65_RS20755 0.13 +2.1 4,478,227 - DZA65_RS20755 0.13 +2.1 4,478,227 - DZA65_RS20755 0.13 +1.3 4,478,227 - DZA65_RS20755 0.13 -0.5 4,478,227 - DZA65_RS20755 0.13 +1.5 4,478,227 - DZA65_RS20755 0.13 +1.3 4,478,256 - DZA65_RS20755 0.15 -1.3 4,478,257 - DZA65_RS20755 0.16 +0.5 4,478,257 - DZA65_RS20755 0.16 +1.0 4,478,257 - DZA65_RS20755 0.16 +0.3 4,478,257 - DZA65_RS20755 0.16 +0.9 4,478,257 - DZA65_RS20755 0.16 +1.7 4,478,259 - DZA65_RS20755 0.16 -0.2 4,478,259 - DZA65_RS20755 0.16 +0.3 4,478,259 - DZA65_RS20755 0.16 +1.0 4,478,259 - DZA65_RS20755 0.16 +1.9 4,478,266 - DZA65_RS20755 0.16 -0.4 4,478,266 - DZA65_RS20755 0.16 +1.1 4,478,266 - DZA65_RS20755 0.16 -0.2 4,478,293 - DZA65_RS20755 0.19 +0.2 4,478,293 - DZA65_RS20755 0.19 +1.3 4,478,293 - DZA65_RS20755 0.19 +1.6 4,478,293 - DZA65_RS20755 0.19 +2.7 4,478,293 - DZA65_RS20755 0.19 -0.2 4,478,293 - DZA65_RS20755 0.19 +1.7 4,478,339 - DZA65_RS20755 0.23 +1.1 4,478,339 - +2.9 4,478,453 - DZA65_RS20755 0.34 +1.0 4,478,453 - DZA65_RS20755 0.34 +1.0 4,478,453 - DZA65_RS20755 0.34 +0.3 4,478,453 - DZA65_RS20755 0.34 +1.3 4,478,513 - DZA65_RS20755 0.40 +1.6 4,478,690 - DZA65_RS20755 0.57 +0.2 4,478,690 - DZA65_RS20755 0.57 +0.8 4,478,690 - DZA65_RS20755 0.57 +0.5 4,478,690 - DZA65_RS20755 0.57 -0.6 4,478,708 - DZA65_RS20755 0.58 +1.7 4,478,885 - DZA65_RS20755 0.75 +1.0 4,478,885 - DZA65_RS20755 0.75 +1.3 4,478,885 - DZA65_RS20755 0.75 +1.3 4,478,945 - DZA65_RS20755 0.81 +1.6 4,479,169 - +0.0
Or see this region's nucleotide sequence