Strain Fitness in Dickeya dianthicola ME23

Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20690

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	M9+glycerol
				remove
4,462,705	+	DZA65_RS20685	0.15	-2.2
4,462,705	+	DZA65_RS20685	0.15	-0.3
4,462,705	+	DZA65_RS20685	0.15	+0.6
4,462,706	-	DZA65_RS20685	0.15	-0.7
4,462,706	-	DZA65_RS20685	0.15	+0.1
4,462,706	-	DZA65_RS20685	0.15	+0.0
4,462,706	-	DZA65_RS20685	0.15	-0.3
4,462,706	-	DZA65_RS20685	0.15	+1.0
4,462,706	-	DZA65_RS20685	0.15	-0.6
4,462,706	-	DZA65_RS20685	0.15	+1.1
4,462,706	-	DZA65_RS20685	0.15	+0.2
4,462,706	-	DZA65_RS20685	0.15	-0.8
4,462,706	-	DZA65_RS20685	0.15	-0.2
4,462,706	-	DZA65_RS20685	0.15	-2.0
4,462,775	-	DZA65_RS20685	0.21	-0.8
4,462,775	-	DZA65_RS20685	0.21	+0.6
4,462,788	-	DZA65_RS20685	0.22	+0.5
4,462,804	+	DZA65_RS20685	0.23	+0.2
4,462,804	+	DZA65_RS20685	0.23	+0.3
4,462,804	+	DZA65_RS20685	0.23	+0.5
4,462,804	+	DZA65_RS20685	0.23	-0.7
4,462,804	+	DZA65_RS20685	0.23	+0.7
4,462,804	+	DZA65_RS20685	0.23	+0.6
4,462,805	-	DZA65_RS20685	0.23	+0.3
4,462,805	-	DZA65_RS20685	0.23	-2.0
4,462,805	-	DZA65_RS20685	0.23	+0.8
4,462,805	-	DZA65_RS20685	0.23	+1.0
4,462,805	-	DZA65_RS20685	0.23	-0.1
4,462,805	-	DZA65_RS20685	0.23	-0.2
4,462,837	+	DZA65_RS20685	0.26	-0.2
4,462,838	-	DZA65_RS20685	0.26	+0.1
4,463,020	+	DZA65_RS20685	0.42	+0.0
4,463,020	+	DZA65_RS20685	0.42	-0.6
4,463,021	-	DZA65_RS20685	0.42	+1.2
4,463,021	-	DZA65_RS20685	0.42	-1.8
4,463,021	-	DZA65_RS20685	0.42	+0.3
4,463,423	+	DZA65_RS20685	0.77	-1.6
4,463,448	+	DZA65_RS20685	0.80	+1.7
4,463,448	+	DZA65_RS20685	0.80	+0.4
4,463,448	+	DZA65_RS20685	0.80	-1.3
4,463,448	+	DZA65_RS20685	0.80	-0.1
4,463,608	+			-1.4
4,463,608	+			+0.4
4,463,608	+			-0.1
4,463,608	+			-0.3
4,463,608	+			+1.7
4,463,608	+			+0.0
4,463,609	-			-0.1
4,463,609	-			-0.2
4,463,609	-			+0.7
4,463,609	-			-1.2
4,463,609	-			+0.0
4,463,609	-			-0.4
4,463,609	-			+1.0
4,463,668	-			-0.2
4,463,681	+			-1.3
4,463,694	+			+0.2
4,463,698	+			-0.6
4,463,698	+			-0.6
4,463,699	-			-1.3
4,463,699	-			+0.7
4,463,699	-			-0.7
4,463,699	-			-0.2
4,463,895	-	DZA65_RS20690	0.17	+0.3
4,463,895	-	DZA65_RS20690	0.17	-1.8
4,463,895	-	DZA65_RS20690	0.17	+0.4
4,463,895	-	DZA65_RS20690	0.17	-0.2
4,463,895	-	DZA65_RS20690	0.17	+0.3
4,463,903	-	DZA65_RS20690	0.17	-0.6
4,464,136	-	DZA65_RS20690	0.36	-0.5
4,464,195	+	DZA65_RS20690	0.40	+0.2
4,464,195	+	DZA65_RS20690	0.40	-0.2
4,464,195	+	DZA65_RS20690	0.40	+0.0
4,464,195	+	DZA65_RS20690	0.40	+0.6
4,464,195	+	DZA65_RS20690	0.40	-2.0
4,464,195	+	DZA65_RS20690	0.40	+2.0
4,464,195	+	DZA65_RS20690	0.40	+2.8
4,464,196	-	DZA65_RS20690	0.40	+0.0
4,464,196	-	DZA65_RS20690	0.40	-0.6
4,464,196	-	DZA65_RS20690	0.40	+0.7
4,464,196	-	DZA65_RS20690	0.40	+1.2
4,464,196	-	DZA65_RS20690	0.40	-0.3
4,464,196	-	DZA65_RS20690	0.40	+0.8
4,464,196	-	DZA65_RS20690	0.40	+0.7
4,464,196	-	DZA65_RS20690	0.40	+0.3
4,464,196	-	DZA65_RS20690	0.40	+1.4
4,464,196	-	DZA65_RS20690	0.40	-1.4
4,464,196	-	DZA65_RS20690	0.40	-0.6
4,464,196	-	DZA65_RS20690	0.40	-1.8
4,464,196	-	DZA65_RS20690	0.40	-0.7
4,464,196	-	DZA65_RS20690	0.40	-1.0
4,464,243	+	DZA65_RS20690	0.44	+1.0
4,464,243	+	DZA65_RS20690	0.44	+0.0
4,464,243	+	DZA65_RS20690	0.44	+1.1
4,464,243	+	DZA65_RS20690	0.44	+0.2
4,464,244	-	DZA65_RS20690	0.44	-0.2
4,464,244	-	DZA65_RS20690	0.44	+0.1
4,464,244	-	DZA65_RS20690	0.44	+1.3
4,464,244	-	DZA65_RS20690	0.44	+0.7
4,464,269	+	DZA65_RS20690	0.46	-0.3
4,464,269	+	DZA65_RS20690	0.46	-1.0
4,464,269	+	DZA65_RS20690	0.46	+0.5
4,464,269	+	DZA65_RS20690	0.46	+0.6
4,464,270	-	DZA65_RS20690	0.46	+0.7
4,464,270	-	DZA65_RS20690	0.46	-0.6
4,464,362	+	DZA65_RS20690	0.53	-1.0
4,464,362	+	DZA65_RS20690	0.53	-0.6
4,464,362	+	DZA65_RS20690	0.53	+2.2
4,464,363	-	DZA65_RS20690	0.53	+0.0
4,464,363	-	DZA65_RS20690	0.53	-0.5
4,464,363	-	DZA65_RS20690	0.53	+0.4
4,464,402	-	DZA65_RS20690	0.56	-1.5
4,464,422	+	DZA65_RS20690	0.58	+1.6
4,464,422	+	DZA65_RS20690	0.58	-1.3
4,464,423	-	DZA65_RS20690	0.58	-0.7
4,464,450	+	DZA65_RS20690	0.60	+1.3
4,464,450	+			+1.0
4,464,520	+	DZA65_RS20690	0.65	-0.6
4,464,520	+	DZA65_RS20690	0.65	+0.0
4,464,520	+	DZA65_RS20690	0.65	+2.5
4,464,521	-	DZA65_RS20690	0.65	+1.0
4,464,521	-	DZA65_RS20690	0.65	-0.3
4,464,521	-	DZA65_RS20690	0.65	+0.3
4,464,521	-	DZA65_RS20690	0.65	+1.5
4,464,564	+	DZA65_RS20690	0.69	+0.0
4,464,564	+	DZA65_RS20690	0.69	-0.5
4,464,564	+	DZA65_RS20690	0.69	+0.0
4,464,564	+	DZA65_RS20690	0.69	+0.8
4,464,564	+	DZA65_RS20690	0.69	+0.3
4,464,564	+	DZA65_RS20690	0.69	+0.2
4,464,564	+	DZA65_RS20690	0.69	+0.0
4,464,564	+	DZA65_RS20690	0.69	+0.2
4,464,564	+	DZA65_RS20690	0.69	-0.8
4,464,565	-	DZA65_RS20690	0.69	-2.0
4,464,565	-	DZA65_RS20690	0.69	+1.5
4,464,565	-	DZA65_RS20690	0.69	+1.2
4,464,565	-	DZA65_RS20690	0.69	+1.6
4,464,565	-	DZA65_RS20690	0.69	+1.0
4,464,565	-	DZA65_RS20690	0.69	+0.0
4,464,565	-	DZA65_RS20690	0.69	+1.8
4,464,565	-	DZA65_RS20690	0.69	-0.9
4,464,673	+	DZA65_RS20690	0.77	+1.6
4,464,673	+	DZA65_RS20690	0.77	+0.7
4,464,673	+	DZA65_RS20690	0.77	-0.3
4,464,675	+	DZA65_RS20690	0.77	+0.1
4,464,675	+	DZA65_RS20690	0.77	+0.4
4,464,675	+	DZA65_RS20690	0.77	+0.3
4,464,675	+	DZA65_RS20690	0.77	-0.7
4,464,675	+	DZA65_RS20690	0.77	+0.2
4,464,675	+	DZA65_RS20690	0.77	-1.3
4,464,675	+	DZA65_RS20690	0.77	-1.3
4,464,675	+	DZA65_RS20690	0.77	+0.2
4,464,675	+	DZA65_RS20690	0.77	-1.1
4,464,675	+	DZA65_RS20690	0.77	+0.2
4,464,675	+	DZA65_RS20690	0.77	+0.4
4,464,675	+	DZA65_RS20690	0.77	-0.4
4,464,675	+	DZA65_RS20690	0.77	+0.1
4,464,675	+	DZA65_RS20690	0.77	+0.3
4,464,675	+	DZA65_RS20690	0.77	+0.3
4,464,675	+	DZA65_RS20690	0.77	-1.6
4,464,675	+	DZA65_RS20690	0.77	+1.0
4,464,676	-	DZA65_RS20690	0.77	-1.5
4,464,676	-	DZA65_RS20690	0.77	+0.7
4,464,676	-	DZA65_RS20690	0.77	+0.4
4,464,676	-	DZA65_RS20690	0.77	-0.2
4,464,676	-	DZA65_RS20690	0.77	+0.0
4,464,676	-	DZA65_RS20690	0.77	+1.3
4,464,676	-	DZA65_RS20690	0.77	+1.2
4,464,676	-	DZA65_RS20690	0.77	+0.4
4,464,676	-	DZA65_RS20690	0.77	-0.4
4,464,676	-	DZA65_RS20690	0.77	-1.6
4,464,676	-	DZA65_RS20690	0.77	+2.4
4,464,676	-	DZA65_RS20690	0.77	-1.3
4,464,676	-	DZA65_RS20690	0.77	+1.0
4,464,676	-	DZA65_RS20690	0.77	+2.0
4,464,676	-	DZA65_RS20690	0.77	+1.0
4,464,676	-	DZA65_RS20690	0.77	+0.5
4,464,676	-	DZA65_RS20690	0.77	+0.8
4,464,676	-	DZA65_RS20690	0.77	-1.5
4,464,676	-	DZA65_RS20690	0.77	+0.2
4,464,676	-	DZA65_RS20690	0.77	-1.2
4,464,676	-	DZA65_RS20690	0.77	+0.1
4,464,681	+	DZA65_RS20690	0.78	+0.3
4,464,681	+	DZA65_RS20690	0.78	-0.4
4,464,681	+	DZA65_RS20690	0.78	+0.1
4,464,681	+	DZA65_RS20690	0.78	-0.8
4,464,682	-	DZA65_RS20690	0.78	-1.4
4,464,682	-	DZA65_RS20690	0.78	-0.2
4,464,682	-	DZA65_RS20690	0.78	-1.0
4,464,682	-	DZA65_RS20690	0.78	+0.7
4,464,682	-	DZA65_RS20690	0.78	-0.6
4,464,682	-	DZA65_RS20690	0.78	-1.2
4,464,682	-	DZA65_RS20690	0.78	+0.9
4,464,682	-	DZA65_RS20690	0.78	-1.8
4,464,682	-	DZA65_RS20690	0.78	-1.3
4,464,738	+	DZA65_RS20690	0.82	-0.8
4,464,838	+	DZA65_RS20690	0.90	+0.8
4,464,856	+			-1.6
4,464,856	+			-1.2
4,464,856	+			-1.5
4,464,856	+			+0.8
4,464,856	+			-0.1
4,464,856	+			+0.9
4,464,856	+			+1.0
4,464,856	+			-0.2
4,464,856	+			+0.0
4,464,857	-			+1.9
4,464,857	-			+0.5
4,464,857	-			+0.6
4,464,857	-			+0.5
4,464,882	+			-1.2
4,464,882	+			-0.7
4,464,882	+			+0.5
4,464,882	+			-1.6
4,464,882	+			+0.9
4,464,882	+			-0.2
4,464,883	-			+0.8
4,464,883	-			-0.1
4,464,883	-			-1.8
4,464,883	-			-2.3
4,464,883	-			+1.0
4,464,883	-			-0.9
4,464,883	-			+0.9
4,464,883	-			+0.4
4,464,883	-			+0.5
4,464,883	-			-2.2
4,464,883	-			+0.5
4,464,883	-			-0.3
4,464,968	-			-1.0
4,464,982	+			+0.0
4,464,982	+			-0.4
4,464,982	+			-2.8
4,464,983	-			+1.0
4,464,984	+			+0.8
4,464,984	+			+0.8
4,464,985	-			-1.2
4,464,985	-			-0.1
4,464,985	-			-0.4
4,464,985	-			-0.5
4,464,991	+			+0.4
4,464,992	-			+0.5
4,465,043	-			+1.0
4,465,043	-			-0.6
4,465,093	-	DZA65_RS20695	0.12	-0.9
4,465,125	-	DZA65_RS20695	0.16	-0.7
4,465,160	+	DZA65_RS20695	0.19	-2.4
4,465,160	+	DZA65_RS20695	0.19	-1.1
4,465,160	+	DZA65_RS20695	0.19	-1.0
4,465,161	-	DZA65_RS20695	0.19	+0.6
4,465,161	-	DZA65_RS20695	0.19	-0.2
4,465,179	+	DZA65_RS20695	0.21	+0.3
4,465,180	-	DZA65_RS20695	0.21	+0.6
4,465,180	-	DZA65_RS20695	0.21	+0.0
4,465,308	+	DZA65_RS20695	0.33	+0.3
4,465,322	+	DZA65_RS20695	0.35	+0.7
4,465,323	-	DZA65_RS20695	0.35	-1.3
4,465,323	-	DZA65_RS20695	0.35	+0.7
4,465,325	+	DZA65_RS20695	0.35	+0.4
4,465,326	-	DZA65_RS20695	0.35	+0.3
4,465,348	+	DZA65_RS20695	0.37	+0.5
4,465,348	+	DZA65_RS20695	0.37	-1.2
4,465,348	+	DZA65_RS20695	0.37	-0.6
4,465,349	-	DZA65_RS20695	0.37	+0.4
4,465,359	+	DZA65_RS20695	0.38	-3.0
4,465,360	-	DZA65_RS20695	0.38	+0.0
4,465,390	+	DZA65_RS20695	0.41	-0.6
4,465,390	+	DZA65_RS20695	0.41	+0.7
4,465,390	+	DZA65_RS20695	0.41	-0.1
4,465,390	+	DZA65_RS20695	0.41	+0.2
4,465,390	+	DZA65_RS20695	0.41	+0.5
4,465,390	+	DZA65_RS20695	0.41	-0.6
4,465,390	+	DZA65_RS20695	0.41	-0.2
4,465,390	+	DZA65_RS20695	0.41	-0.6
4,465,390	+	DZA65_RS20695	0.41	+0.6
4,465,391	-	DZA65_RS20695	0.41	+1.0
4,465,391	-	DZA65_RS20695	0.41	+0.2
4,465,391	-	DZA65_RS20695	0.41	+0.0
4,465,391	-	DZA65_RS20695	0.41	-1.2
4,465,479	+	DZA65_RS20695	0.50	+0.7
4,465,490	+	DZA65_RS20695	0.51	+1.8
4,465,490	+	DZA65_RS20695	0.51	+2.2
4,465,490	+	DZA65_RS20695	0.51	+2.6
4,465,490	+	DZA65_RS20695	0.51	-2.4
4,465,490	+	DZA65_RS20695	0.51	-0.3
4,465,490	+	DZA65_RS20695	0.51	+0.3
4,465,491	-	DZA65_RS20695	0.51	-0.4
4,465,491	-	DZA65_RS20695	0.51	+1.2
4,465,491	-	DZA65_RS20695	0.51	-1.0
4,465,491	-	DZA65_RS20695	0.51	-1.1
4,465,491	-	DZA65_RS20695	0.51	+0.2
4,465,491	-	DZA65_RS20695	0.51	-0.9
4,465,498	+	DZA65_RS20695	0.52	+0.2
4,465,498	+	DZA65_RS20695	0.52	-0.6
4,465,498	+	DZA65_RS20695	0.52	+1.0
4,465,498	+	DZA65_RS20695	0.52	+1.4
4,465,498	+	DZA65_RS20695	0.52	-0.7
4,465,498	+	DZA65_RS20695	0.52	+1.0
4,465,498	+	DZA65_RS20695	0.52	-1.0
4,465,498	+	DZA65_RS20695	0.52	+0.7
4,465,498	+	DZA65_RS20695	0.52	+0.3
4,465,498	+	DZA65_RS20695	0.52	+0.6
4,465,498	+	DZA65_RS20695	0.52	-0.4
4,465,498	+	DZA65_RS20695	0.52	-0.4
4,465,498	+	DZA65_RS20695	0.52	-2.2
4,465,498	+	DZA65_RS20695	0.52	-1.3
4,465,498	+	DZA65_RS20695	0.52	-0.5
4,465,499	-	DZA65_RS20695	0.52	+0.1
4,465,499	-	DZA65_RS20695	0.52	-0.2
4,465,499	-	DZA65_RS20695	0.52	+0.4
4,465,500	+	DZA65_RS20695	0.52	-0.2
4,465,501	-	DZA65_RS20695	0.52	-1.6
4,465,527	+	DZA65_RS20695	0.55	-0.4
4,465,527	+	DZA65_RS20695	0.55	-0.0
4,465,528	-	DZA65_RS20695	0.55	-0.1
4,465,528	-	DZA65_RS20695	0.55	+1.2
4,465,528	-	DZA65_RS20695	0.55	-0.5
4,465,528	-	DZA65_RS20695	0.55	-0.2
4,465,529	+	DZA65_RS20695	0.55	+1.5
4,465,529	+	DZA65_RS20695	0.55	+1.1
4,465,529	+	DZA65_RS20695	0.55	-1.0
4,465,529	+	DZA65_RS20695	0.55	+0.2
4,465,529	+	DZA65_RS20695	0.55	+0.5
4,465,627	-	DZA65_RS20695	0.64	-2.0
4,465,628	+	DZA65_RS20695	0.64	+0.1
4,465,628	+			-0.6
4,465,628	+	DZA65_RS20695	0.64	-0.3
4,465,628	+			-0.6
4,465,628	+	DZA65_RS20695	0.64	-2.2
4,465,628	+	DZA65_RS20695	0.64	+0.0
4,465,628	+	DZA65_RS20695	0.64	+0.3
4,465,628	+	DZA65_RS20695	0.64	-0.3
4,465,628	+	DZA65_RS20695	0.64	+0.8
4,465,628	+	DZA65_RS20695	0.64	-0.1
4,465,628	+	DZA65_RS20695	0.64	-0.7
4,465,628	+	DZA65_RS20695	0.64	+0.8
4,465,628	+	DZA65_RS20695	0.64	+0.2
4,465,629	-	DZA65_RS20695	0.64	-0.3
4,465,629	-	DZA65_RS20695	0.64	-0.3
4,465,629	-	DZA65_RS20695	0.64	-1.6
4,465,629	-	DZA65_RS20695	0.64	+0.8
4,465,629	-	DZA65_RS20695	0.64	-1.6
4,465,629	-	DZA65_RS20695	0.64	+0.4
4,465,666	-	DZA65_RS20695	0.68	-0.9
4,465,688	-	DZA65_RS20695	0.70	-2.2
4,465,688	-	DZA65_RS20695	0.70	-0.7
4,465,721	-	DZA65_RS20695	0.73	+1.3
4,465,820	+	DZA65_RS20695	0.83	-0.2
4,465,820	+	DZA65_RS20695	0.83	+1.8
4,465,820	+	DZA65_RS20695	0.83	-0.5
4,465,820	+	DZA65_RS20695	0.83	-0.9
4,465,821	-	DZA65_RS20695	0.83	+0.0
4,465,821	-	DZA65_RS20695	0.83	-0.1
4,465,835	+	DZA65_RS20695	0.84	-0.3
4,465,835	+	DZA65_RS20695	0.84	-0.4
4,465,835	+	DZA65_RS20695	0.84	+0.9
4,465,835	+	DZA65_RS20695	0.84	-0.2
4,465,835	+	DZA65_RS20695	0.84	+0.2
4,465,835	+	DZA65_RS20695	0.84	-0.4
4,465,836	-	DZA65_RS20695	0.84	+0.4
4,465,836	-	DZA65_RS20695	0.84	+1.4
4,465,836	-	DZA65_RS20695	0.84	-1.3
4,465,836	-	DZA65_RS20695	0.84	-1.1
4,465,836	-	DZA65_RS20695	0.84	+0.4
4,465,836	-	DZA65_RS20695	0.84	+1.9
4,465,836	-	DZA65_RS20695	0.84	-0.6
4,465,836	-	DZA65_RS20695	0.84	-1.7
4,465,836	-	DZA65_RS20695	0.84	-0.3
4,465,862	+	DZA65_RS20695	0.87	+0.6
4,465,863	-	DZA65_RS20695	0.87	-0.2
4,465,869	+	DZA65_RS20695	0.88	+0.0
4,465,869	+	DZA65_RS20695	0.88	+0.0
4,465,869	+	DZA65_RS20695	0.88	+0.8
4,465,870	-	DZA65_RS20695	0.88	+1.0
4,465,870	-	DZA65_RS20695	0.88	-1.6
4,465,870	-	DZA65_RS20695	0.88	+0.3
4,465,876	-			-0.6
4,465,920	+			-0.2
4,465,920	+			+0.5

Or see this region's nucleotide sequence