Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17825

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,835,270	+		DZA65_RS17820	0.18	+1.8
3,835,270	+		DZA65_RS17820	0.18	+0.8
3,835,270	+		DZA65_RS17820	0.18	+1.6
3,835,271	-		DZA65_RS17820	0.18	-0.2
3,835,271	-		DZA65_RS17820	0.18	-0.3
3,835,271	-		DZA65_RS17820	0.18	-0.8
3,835,271	-		DZA65_RS17820	0.18	-1.8
3,835,271	-		DZA65_RS17820	0.18	+0.5
3,835,364	+		DZA65_RS17820	0.29	+0.6
3,835,366	+		DZA65_RS17820	0.30	-2.2
3,835,366	+		DZA65_RS17820	0.30	+0.1
3,835,366	+		DZA65_RS17820	0.30	-1.9
3,835,366	+		DZA65_RS17820	0.30	+2.0
3,835,366	+		DZA65_RS17820	0.30	-0.6
3,835,366	+		DZA65_RS17820	0.30	-1.4
3,835,366	+		DZA65_RS17820	0.30	+0.1
3,835,366	+		DZA65_RS17820	0.30	-1.0
3,835,366	+		DZA65_RS17820	0.30	+0.2
3,835,366	+		DZA65_RS17820	0.30	-0.4
3,835,366	+		DZA65_RS17820	0.30	+0.8
3,835,366	+		DZA65_RS17820	0.30	-0.2
3,835,367	-		DZA65_RS17820	0.30	-2.5
3,835,367	-		DZA65_RS17820	0.30	-0.5
3,835,367	-		DZA65_RS17820	0.30	+0.3
3,835,367	-		DZA65_RS17820	0.30	+0.2
3,835,367	-		DZA65_RS17820	0.30	-0.9
3,835,367	-		DZA65_RS17820	0.30	-0.8
3,835,367	-		DZA65_RS17820	0.30	-0.0
3,835,367	-		DZA65_RS17820	0.30	-1.3
3,835,367	-		DZA65_RS17820	0.30	+0.3
3,835,367	-		DZA65_RS17820	0.30	-0.7
3,835,387	+		DZA65_RS17820	0.32	-0.0
3,835,387	+		DZA65_RS17820	0.32	-1.5
3,835,388	-		DZA65_RS17820	0.32	+1.7
3,835,417	+		DZA65_RS17820	0.36	+2.1
3,835,417	+		DZA65_RS17820	0.36	-1.8
3,835,499	+		DZA65_RS17820	0.46	-0.6
3,835,548	+		DZA65_RS17820	0.53	+0.7
3,835,570	+		DZA65_RS17820	0.55	-0.3
3,835,657	+		DZA65_RS17820	0.66	+0.5
3,835,657	+		DZA65_RS17820	0.66	+0.1
3,835,657	+		DZA65_RS17820	0.66	+0.7
3,835,723	+		DZA65_RS17820	0.75	-1.8
3,835,723	+		DZA65_RS17820	0.75	+0.2
3,835,723	+		DZA65_RS17820	0.75	+0.1
3,835,724	-		DZA65_RS17820	0.75	-0.9
3,835,724	-		DZA65_RS17820	0.75	-0.8
3,835,744	+		DZA65_RS17820	0.77	-0.4
3,835,939	-				+0.5
3,836,142	+				-0.9
3,836,142	+				+0.8
3,836,143	-				-0.2
3,836,229	+				-2.2
3,836,230	-				-1.1
3,836,230	-				-0.9
3,836,242	+				-0.4
3,836,243	-				+0.8
3,836,328	+		DZA65_RS17825	0.15	-1.8
3,836,328	+		DZA65_RS17825	0.15	+2.8
3,836,328	+		DZA65_RS17825	0.15	-1.2
3,836,329	-		DZA65_RS17825	0.16	-1.4
3,836,329	-		DZA65_RS17825	0.16	-0.0
3,836,395	+		DZA65_RS17825	0.23	-0.1
3,836,464	+		DZA65_RS17825	0.32	-0.3
3,836,464	+		DZA65_RS17825	0.32	+0.2
3,836,464	+		DZA65_RS17825	0.32	+1.4
3,836,464	+		DZA65_RS17825	0.32	+0.5
3,836,464	+		DZA65_RS17825	0.32	-0.0
3,836,465	-		DZA65_RS17825	0.32	-0.7
3,836,465	-		DZA65_RS17825	0.32	-1.2
3,836,465	-		DZA65_RS17825	0.32	-1.0
3,836,465	-		DZA65_RS17825	0.32	+0.8
3,836,622	+		DZA65_RS17825	0.50	+1.1
3,836,622	+		DZA65_RS17825	0.50	+0.5
3,836,702	+		DZA65_RS17825	0.60	-0.9
3,836,703	-		DZA65_RS17825	0.60	+0.1
3,836,703	-		DZA65_RS17825	0.60	+0.5
3,836,703	-		DZA65_RS17825	0.60	-0.1
3,836,743	+		DZA65_RS17825	0.65	-0.4
3,836,743	+		DZA65_RS17825	0.65	+0.9
3,836,743	+		DZA65_RS17825	0.65	+1.6
3,836,743	+		DZA65_RS17825	0.65	-0.5
3,836,743	+		DZA65_RS17825	0.65	+0.5
3,836,743	+		DZA65_RS17825	0.65	+0.6
3,836,743	+		DZA65_RS17825	0.65	-0.6
3,836,743	+		DZA65_RS17825	0.65	-0.7
3,836,743	+		DZA65_RS17825	0.65	+1.7
3,836,743	+		DZA65_RS17825	0.65	-0.2
3,836,743	+		DZA65_RS17825	0.65	-0.6
3,836,743	+		DZA65_RS17825	0.65	+0.1
3,836,743	+		DZA65_RS17825	0.65	+2.1
3,836,743	+		DZA65_RS17825	0.65	-0.0
3,836,743	+		DZA65_RS17825	0.65	-2.3
3,836,744	-		DZA65_RS17825	0.65	+1.0
3,836,744	-		DZA65_RS17825	0.65	+0.7
3,836,744	-		DZA65_RS17825	0.65	-1.2
3,836,744	-		DZA65_RS17825	0.65	-0.6
3,836,744	-		DZA65_RS17825	0.65	-0.6
3,836,744	-				+2.0
3,836,744	-		DZA65_RS17825	0.65	-0.0
3,836,744	-		DZA65_RS17825	0.65	-0.6
3,836,745	+		DZA65_RS17825	0.65	-1.8
3,836,745	+		DZA65_RS17825	0.65	-1.7
3,836,745	+		DZA65_RS17825	0.65	-2.7
3,836,745	+		DZA65_RS17825	0.65	-2.4
3,836,745	+		DZA65_RS17825	0.65	-0.4
3,836,745	+		DZA65_RS17825	0.65	-3.0
3,836,745	+		DZA65_RS17825	0.65	-0.6
3,836,746	-		DZA65_RS17825	0.65	-1.4
3,836,746	-		DZA65_RS17825	0.65	-0.4
3,836,929	+		DZA65_RS17825	0.87	-1.8
3,836,930	-		DZA65_RS17825	0.87	+0.2
3,836,930	-		DZA65_RS17825	0.87	-0.5
3,836,931	+		DZA65_RS17825	0.87	-1.8
3,836,931	+		DZA65_RS17825	0.87	-0.7
3,836,931	+		DZA65_RS17825	0.87	-1.6
3,836,931	+		DZA65_RS17825	0.87	-2.2
3,836,931	+		DZA65_RS17825	0.87	-0.8
3,836,931	+		DZA65_RS17825	0.87	-0.0
3,836,932	-		DZA65_RS17825	0.87	-1.8
3,836,932	-		DZA65_RS17825	0.87	-0.4
3,836,932	-		DZA65_RS17825	0.87	+0.7
3,836,932	-		DZA65_RS17825	0.87	+1.2
3,836,932	-		DZA65_RS17825	0.87	-0.4
3,836,932	-		DZA65_RS17825	0.87	+0.7
3,836,932	-		DZA65_RS17825	0.87	-1.0
3,836,932	-		DZA65_RS17825	0.87	+0.1
3,836,948	+		DZA65_RS17825	0.89	+0.6
3,836,948	+		DZA65_RS17825	0.89	+0.1
3,836,949	-		DZA65_RS17825	0.89	-1.2
3,836,949	-		DZA65_RS17825	0.89	+0.5
3,836,949	-		DZA65_RS17825	0.89	-1.8
3,836,949	-		DZA65_RS17825	0.89	-0.1
3,836,962	+				-2.3
3,836,962	+				+0.1
3,836,963	-				+0.7
3,836,963	-				-0.3
3,837,003	+				+1.4
3,837,084	+				-0.9
3,837,084	+				+1.4
3,837,085	-				-0.8
3,837,085	-				-0.2
3,837,085	-				-0.8
3,837,085	-				-0.0
3,837,099	+				-0.9
3,837,099	+				-1.5
3,837,099	+				-0.1
3,837,099	+				+0.8
3,837,099	+				-0.7
3,837,100	-				+0.2
3,837,100	-				-1.5
3,837,100	-				+0.5
3,837,100	-				+0.0
3,837,151	+				-1.7
3,837,151	+				-2.4
3,837,151	+				+0.1
3,837,151	+				-1.2
3,837,152	-				-0.2
3,837,152	-				+1.0
3,837,152	-				-0.9
3,837,219	+				-0.3
3,837,220	-				+0.8
3,837,220	-				-1.1
3,837,220	-				-1.6
3,837,220	-				-2.3
3,837,220	-				-0.2
3,837,226	+				-1.4
3,837,226	+				+1.1
3,837,226	+				+0.9
3,837,226	+				+0.2
3,837,227	-				-1.4
3,837,227	-				+0.6
3,837,239	-				-1.4
3,837,434	-		DZA65_RS17830	0.12	-0.2
3,837,504	+		DZA65_RS17830	0.16	+0.2
3,837,594	+				+1.6
3,837,595	-		DZA65_RS17830	0.22	-0.2
3,837,595	-		DZA65_RS17830	0.22	-0.4
3,837,595	-		DZA65_RS17830	0.22	-0.2
3,837,595	-		DZA65_RS17830	0.22	+0.1
3,837,611	+		DZA65_RS17830	0.23	-1.5
3,837,612	-		DZA65_RS17830	0.23	+1.4
3,837,660	+		DZA65_RS17830	0.26	+0.7
3,837,754	+		DZA65_RS17830	0.32	+0.5
3,837,755	-		DZA65_RS17830	0.32	+0.8
3,837,755	-		DZA65_RS17830	0.32	-0.4
3,837,755	-		DZA65_RS17830	0.32	-0.2
3,837,755	-		DZA65_RS17830	0.32	-0.4
3,837,755	-		DZA65_RS17830	0.32	+0.1
3,837,858	+		DZA65_RS17830	0.38	+0.4
3,837,859	-		DZA65_RS17830	0.39	-0.2
3,837,980	+		DZA65_RS17830	0.46	+0.8
3,837,981	-		DZA65_RS17830	0.46	+1.5
3,837,981	-		DZA65_RS17830	0.46	+0.8
3,837,996	-		DZA65_RS17830	0.47	-1.3
3,837,996	-		DZA65_RS17830	0.47	+0.8
3,837,996	-		DZA65_RS17830	0.47	+1.2