Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17705

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,810,808	+		DZA65_RS17695	0.75	-1.3
3,810,809	-		DZA65_RS17695	0.75	-0.7
3,810,809	-		DZA65_RS17695	0.75	-2.5
3,811,008	-				-1.0
3,811,008	-				-2.6
3,811,019	+				-1.2
3,811,062	+				-1.9
3,811,113	+				-1.1
3,811,113	+				-0.7
3,811,113	+				-0.0
3,811,113	+				+0.4
3,811,114	-				-0.0
3,811,114	-				-1.9
3,811,114	-				-1.0
3,811,115	+				+0.5
3,811,115	+				-0.3
3,811,115	+				-3.4
3,811,116	-				+1.6
3,811,116	-				+0.4
3,811,116	-				+1.8
3,811,116	-				+0.4
3,811,116	-				+0.2
3,811,119	+				+0.2
3,811,119	+				-1.8
3,811,119	+				+0.8
3,811,119	+				-0.2
3,811,119	+				-2.2
3,811,120	-				+0.1
3,811,120	-				+1.2
3,811,120	-				-1.2
3,811,123	+				+0.1
3,811,123	+				-0.6
3,811,123	+				+1.0
3,811,124	-				-0.1
3,811,124	-				-1.2
3,811,124	-				-0.7
3,811,124	-				+0.1
3,811,129	+				-0.9
3,811,141	+				-0.9
3,811,141	+				-0.7
3,811,142	-				+1.2
3,811,142	-				+0.3
3,811,158	+				-1.6
3,811,159	-				-0.7
3,811,211	+				+1.7
3,811,211	+				+0.2
3,811,211	+				-0.8
3,811,212	-				-0.5
3,811,212	-				+1.2
3,811,255	+		DZA65_RS17700	0.11	-0.7
3,811,255	+		DZA65_RS17700	0.11	-0.8
3,811,255	+		DZA65_RS17700	0.11	-2.2
3,811,256	-		DZA65_RS17700	0.11	+0.4
3,811,256	-		DZA65_RS17700	0.11	+0.3
3,811,256	-		DZA65_RS17700	0.11	+1.3
3,811,256	-		DZA65_RS17700	0.11	-2.7
3,811,312	+		DZA65_RS17700	0.25	+1.4
3,811,312	+		DZA65_RS17700	0.25	+1.5
3,811,312	+		DZA65_RS17700	0.25	-2.7
3,811,312	+		DZA65_RS17700	0.25	+0.2
3,811,312	+		DZA65_RS17700	0.25	-0.8
3,811,312	+		DZA65_RS17700	0.25	-1.3
3,811,312	+		DZA65_RS17700	0.25	-0.0
3,811,312	+		DZA65_RS17700	0.25	-0.2
3,811,312	+		DZA65_RS17700	0.25	-0.2
3,811,312	+		DZA65_RS17700	0.25	-1.8
3,811,313	-		DZA65_RS17700	0.25	+2.1
3,811,313	-		DZA65_RS17700	0.25	+0.5
3,811,313	-		DZA65_RS17700	0.25	-0.2
3,811,313	-		DZA65_RS17700	0.25	-1.0
3,811,313	-		DZA65_RS17700	0.25	-0.4
3,811,321	-		DZA65_RS17700	0.27	-0.3
3,811,376	+		DZA65_RS17700	0.41	+1.0
3,811,376	+		DZA65_RS17700	0.41	-0.5
3,811,376	+		DZA65_RS17700	0.41	+0.1
3,811,377	-		DZA65_RS17700	0.41	-0.8
3,811,377	-		DZA65_RS17700	0.41	+1.1
3,811,377	-		DZA65_RS17700	0.41	-0.2
3,811,377	-		DZA65_RS17700	0.41	+2.7
3,811,382	+		DZA65_RS17700	0.42	-0.3
3,811,382	+		DZA65_RS17700	0.42	+0.4
3,811,382	+		DZA65_RS17700	0.42	+0.8
3,811,382	+		DZA65_RS17700	0.42	-1.5
3,811,382	+		DZA65_RS17700	0.42	+0.2
3,811,382	+		DZA65_RS17700	0.42	-0.8
3,811,382	+		DZA65_RS17700	0.42	-0.1
3,811,383	-		DZA65_RS17700	0.43	-0.2
3,811,383	-		DZA65_RS17700	0.43	+0.8
3,811,383	-		DZA65_RS17700	0.43	-0.2
3,811,383	-		DZA65_RS17700	0.43	+0.2
3,811,383	-		DZA65_RS17700	0.43	+0.1
3,811,383	-		DZA65_RS17700	0.43	+0.7
3,811,456	+				+0.8
3,811,456	+		DZA65_RS17700	0.61	+0.7
3,811,457	-		DZA65_RS17700	0.61	-0.1
3,811,457	-		DZA65_RS17700	0.61	-0.8
3,811,523	+		DZA65_RS17700	0.78	-0.5
3,811,523	+		DZA65_RS17700	0.78	-0.3
3,811,523	+		DZA65_RS17700	0.78	+0.2
3,811,523	+		DZA65_RS17700	0.78	+0.8
3,811,524	-		DZA65_RS17700	0.78	+1.0
3,811,524	-		DZA65_RS17700	0.78	-0.1
3,811,524	-		DZA65_RS17700	0.78	+0.4
3,811,524	-		DZA65_RS17700	0.78	+1.0
3,811,524	-		DZA65_RS17700	0.78	-1.4
3,811,585	+				+1.2
3,811,586	-				+0.9
3,811,612	-				-0.6
3,811,713	+				+1.7
3,811,713	+				+0.6
3,811,713	+				+0.0
3,811,713	+				+1.0
3,811,713	+				-2.8
3,811,713	+				+0.2
3,811,713	+				+0.4
3,811,714	-				-0.2
3,811,714	-				-0.6
3,811,714	-				-1.4
3,811,714	-				+0.8
3,811,714	-				-1.0
3,811,714	-				+0.7
3,811,714	-				+0.4
3,811,714	-				+0.1
3,811,714	-				+0.1
3,811,714	-				-0.8
3,811,714	-				-0.8
3,811,714	-				-1.5
3,811,714	-				-1.9
3,811,714	-				+1.9
3,811,722	-				+1.2
3,811,731	+				+0.7
3,811,761	+				+0.6
3,811,761	+				+2.2
3,811,761	+				-1.2
3,811,762	-				+0.4
3,811,812	+				-0.6
3,811,812	+				-0.2
3,811,812	+				-0.1
3,811,812	+				-2.2
3,811,812	+				+0.5
3,811,812	+				+0.5
3,811,813	-				-0.4
3,811,813	-				-0.6
3,811,813	-				-2.3
3,811,813	-				-0.8
3,811,813	-				+1.9
3,811,813	-				-0.4
3,811,955	+		DZA65_RS17705	0.18	+1.6
3,811,955	+		DZA65_RS17705	0.18	+2.4
3,811,956	-		DZA65_RS17705	0.18	-0.4
3,811,956	-		DZA65_RS17705	0.18	+0.5
3,811,956	-		DZA65_RS17705	0.18	-0.5
3,812,109	+		DZA65_RS17705	0.30	-2.5
3,812,109	+		DZA65_RS17705	0.30	-0.3
3,812,109	+		DZA65_RS17705	0.30	-0.8
3,812,109	+		DZA65_RS17705	0.30	-2.2
3,812,109	+		DZA65_RS17705	0.30	+0.9
3,812,109	+		DZA65_RS17705	0.30	-1.2
3,812,109	+		DZA65_RS17705	0.30	-0.6
3,812,109	+		DZA65_RS17705	0.30	-0.0
3,812,109	+		DZA65_RS17705	0.30	+0.8
3,812,109	+		DZA65_RS17705	0.30	+0.4
3,812,109	+		DZA65_RS17705	0.30	-0.6
3,812,110	-		DZA65_RS17705	0.30	-1.5
3,812,110	-		DZA65_RS17705	0.30	-2.1
3,812,110	-		DZA65_RS17705	0.30	+0.8
3,812,110	-		DZA65_RS17705	0.30	+0.3
3,812,110	-		DZA65_RS17705	0.30	-0.2
3,812,110	-		DZA65_RS17705	0.30	-1.7
3,812,110	-		DZA65_RS17705	0.30	-1.2
3,812,110	-		DZA65_RS17705	0.30	-1.8
3,812,110	-		DZA65_RS17705	0.30	-0.7
3,812,110	-		DZA65_RS17705	0.30	+0.5
3,812,110	-		DZA65_RS17705	0.30	-0.3
3,812,119	+		DZA65_RS17705	0.31	-1.3
3,812,146	+		DZA65_RS17705	0.33	-1.2
3,812,147	-		DZA65_RS17705	0.33	-0.9
3,812,147	-		DZA65_RS17705	0.33	-0.5
3,812,172	+		DZA65_RS17705	0.35	-0.8
3,812,172	+		DZA65_RS17705	0.35	-0.2
3,812,173	-		DZA65_RS17705	0.35	+2.2
3,812,173	-				+0.8
3,812,237	+		DZA65_RS17705	0.40	-0.5
3,812,237	+		DZA65_RS17705	0.40	-0.2
3,812,326	+		DZA65_RS17705	0.47	+0.5
3,812,326	+		DZA65_RS17705	0.47	-0.8
3,812,326	+		DZA65_RS17705	0.47	-2.2
3,812,327	-		DZA65_RS17705	0.47	+0.1
3,812,327	-		DZA65_RS17705	0.47	-0.3
3,812,327	-		DZA65_RS17705	0.47	-0.7
3,812,327	-		DZA65_RS17705	0.47	+1.4
3,812,404	+		DZA65_RS17705	0.53	+0.0
3,812,425	+		DZA65_RS17705	0.55	+0.2
3,812,425	+		DZA65_RS17705	0.55	-0.9
3,812,425	+		DZA65_RS17705	0.55	-0.2
3,812,425	+		DZA65_RS17705	0.55	+0.8
3,812,425	+		DZA65_RS17705	0.55	+1.1
3,812,425	+		DZA65_RS17705	0.55	-0.1
3,812,426	-		DZA65_RS17705	0.55	-0.5
3,812,426	-		DZA65_RS17705	0.55	-0.8
3,812,426	-		DZA65_RS17705	0.55	-1.8
3,812,426	-		DZA65_RS17705	0.55	-0.7
3,812,426	-		DZA65_RS17705	0.55	+0.5
3,812,426	-		DZA65_RS17705	0.55	+0.6
3,812,426	-		DZA65_RS17705	0.55	-1.3
3,812,504	+		DZA65_RS17705	0.61	+0.2
3,812,504	+		DZA65_RS17705	0.61	+0.5
3,812,504	+		DZA65_RS17705	0.61	-0.2
3,812,504	+		DZA65_RS17705	0.61	+0.2
3,812,504	+		DZA65_RS17705	0.61	+0.5
3,812,505	-		DZA65_RS17705	0.61	-1.5
3,812,505	-		DZA65_RS17705	0.61	+0.7
3,812,505	-		DZA65_RS17705	0.61	+1.8
3,812,505	-		DZA65_RS17705	0.61	-1.2
3,812,505	-		DZA65_RS17705	0.61	+0.8
3,812,609	+		DZA65_RS17705	0.69	-0.2
3,812,609	+		DZA65_RS17705	0.69	+0.2
3,812,696	+		DZA65_RS17705	0.76	+0.6
3,812,824	+		DZA65_RS17705	0.86	-0.6
3,812,824	+		DZA65_RS17705	0.86	+0.1
3,812,825	-		DZA65_RS17705	0.86	-0.1
3,812,825	-		DZA65_RS17705	0.86	+0.2
3,812,825	-		DZA65_RS17705	0.86	+0.0
3,812,825	-		DZA65_RS17705	0.86	-2.5
3,812,825	-		DZA65_RS17705	0.86	-0.5
3,812,825	-		DZA65_RS17705	0.86	+2.2
3,812,856	+		DZA65_RS17705	0.89	-0.7
3,812,856	+		DZA65_RS17705	0.89	-2.4
3,812,856	+		DZA65_RS17705	0.89	-0.2
3,812,856	+		DZA65_RS17705	0.89	-0.4
3,812,857	-		DZA65_RS17705	0.89	+1.1
3,812,875	+				-0.2
3,812,875	+				-0.3
3,812,875	+				+0.6
3,812,876	-				-0.4
3,812,876	-				+0.4
3,812,876	-				-0.0
3,812,876	-				-1.8
3,812,932	+				+0.8
3,812,932	+				-1.0
3,812,932	+				-0.8
3,813,042	-				+1.0
3,813,184	+		DZA65_RS17710	0.34	-0.9
3,813,184	+		DZA65_RS17710	0.34	-1.8
3,813,184	+		DZA65_RS17710	0.34	+0.1
3,813,184	+		DZA65_RS17710	0.34	+0.4
3,813,185	-		DZA65_RS17710	0.34	-0.2
3,813,185	-		DZA65_RS17710	0.34	+1.5
3,813,185	-		DZA65_RS17710	0.34	+1.9
3,813,185	-		DZA65_RS17710	0.34	+0.8
3,813,229	+		DZA65_RS17710	0.42	+0.5
3,813,230	-		DZA65_RS17710	0.42	-2.0
3,813,230	-		DZA65_RS17710	0.42	+1.0
3,813,288	-		DZA65_RS17710	0.53	+0.4
3,813,397	+		DZA65_RS17710	0.73	-0.1
3,813,397	+		DZA65_RS17710	0.73	-1.2
3,813,398	-		DZA65_RS17710	0.74	+0.4
3,813,398	-		DZA65_RS17710	0.74	+1.3
3,813,478	-		DZA65_RS17710	0.88	+1.3
3,813,519	+				+0.3
3,813,519	+				+0.5
3,813,519	+				-0.3
3,813,520	-				+1.2
3,813,520	-				-0.2
3,813,534	+				-1.2
3,813,534	+				-1.0
3,813,575	+				-0.7
3,813,575	+				+0.1
3,813,575	+				-0.0
3,813,575	+				-0.9
3,813,576	-				-0.5
3,813,576	-				+0.6
3,813,580	+				+0.2
3,813,580	+				-3.5
3,813,580	+				+0.5
3,813,580	+				-1.0
3,813,580	+				-0.6
3,813,581	-				+0.1
3,813,581	-				-1.3
3,813,618	-				-1.0
3,813,701	+				+1.6
3,813,701	+				+0.4
3,813,732	+				+0.2
3,813,732	+				-0.4
3,813,732	+				+0.6
3,813,733	-				-0.4
3,813,754	+				-0.5
3,813,835	+		DZA65_RS17715	0.16	+0.1
3,813,899	+		DZA65_RS17715	0.21	+0.1
3,813,899	+		DZA65_RS17715	0.21	+0.3
3,813,899	+		DZA65_RS17715	0.21	+1.0
3,813,900	-		DZA65_RS17715	0.21	-1.9
3,813,925	+		DZA65_RS17715	0.23	+0.2
3,813,925	+		DZA65_RS17715	0.23	-0.7
3,813,925	+		DZA65_RS17715	0.23	+0.2
3,813,925	+		DZA65_RS17715	0.23	-0.1
3,813,925	+		DZA65_RS17715	0.23	+0.4
3,813,926	-		DZA65_RS17715	0.23	-1.6
3,813,926	-		DZA65_RS17715	0.23	-0.0
3,813,926	-		DZA65_RS17715	0.23	-2.0
3,813,926	-		DZA65_RS17715	0.23	+0.6
3,813,926	-		DZA65_RS17715	0.23	+0.7