Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17120

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,696,752	+		DZA65_RS17115	0.65	-0.8
3,696,752	+		DZA65_RS17115	0.65	+1.4
3,696,753	-		DZA65_RS17115	0.65	+0.6
3,696,914	+		DZA65_RS17115	0.71	+0.9
3,697,071	+		DZA65_RS17115	0.78	+0.6
3,697,307	+		DZA65_RS17115	0.87	-0.8
3,697,459	-				+0.2
3,697,493	+				-0.2
3,697,493	+				-0.3
3,697,493	+				+0.3
3,697,494	-				+1.6
3,697,494	-				+0.2
3,697,505	+				-1.1
3,697,506	-				+0.0
3,697,506	-				-0.8
3,697,517	+				+2.6
3,697,517	+				+1.7
3,697,517	+				+0.5
3,697,518	-				+1.4
3,697,518	-				-2.4
3,697,518	-				-0.8
3,697,518	-				+0.7
3,697,529	+				-1.7
3,697,529	+				+0.7
3,697,529	+				-1.3
3,697,530	-				-1.3
3,697,530	-				+0.2
3,697,530	-				+1.5
3,697,590	+				-1.8
3,697,590	+				+0.5
3,697,591	-				-0.3
3,697,591	-				+0.2
3,697,591	-				+0.7
3,697,630	+				-0.3
3,697,630	+				-0.6
3,697,630	+				+0.3
3,697,630	+				-0.8
3,697,630	+				-0.1
3,697,630	+				+0.6
3,697,630	+				-0.8
3,697,631	-				+1.4
3,697,631	-				-0.3
3,697,631	-				+0.3
3,697,631	-				-0.3
3,697,631	-				-0.8
3,697,631	-				-1.6
3,697,631	-				-1.0
3,697,631	-				-0.6
3,697,631	-				-1.0
3,697,631	-				-0.6
3,697,631	-				-0.7
3,697,653	-				+0.2
3,697,671	-				+0.7
3,697,687	+				-1.6
3,697,687	+				-0.5
3,697,687	+				+0.6
3,697,687	+				-0.5
3,697,687	+				+2.1
3,697,687	+				-1.6
3,697,687	+				-1.6
3,697,688	-				+0.7
3,697,688	-				-0.3
3,697,688	-				+1.7
3,697,688	-				+0.5
3,697,688	-				+0.2
3,697,688	-				-3.3
3,697,688	-				-1.2
3,697,688	-				-1.6
3,697,688	-				-1.3
3,697,688	-				+0.4
3,697,688	-				-0.3
3,697,688	-				+1.0
3,697,688	-				+0.5
3,697,688	-				-2.7
3,697,688	-				+0.5
3,697,688	-				+0.3
3,697,688	-				+0.3
3,697,735	+				+0.0
3,697,735	+				-1.4
3,697,735	+				+0.5
3,697,736	-				-0.3
3,697,739	+				-0.3
3,697,739	+				-0.1
3,697,739	+				+0.7
3,697,739	+				+1.1
3,697,740	-				-1.0
3,697,740	-				-1.2
3,697,740	-				+1.1
3,697,740	-				-0.6
3,697,740	-				-0.0
3,697,775	+				+1.4
3,697,776	-				-0.9
3,698,050	+		DZA65_RS17120	0.13	+0.0
3,698,050	+		DZA65_RS17120	0.13	+0.5
3,698,050	+		DZA65_RS17120	0.13	-0.5
3,698,051	-		DZA65_RS17120	0.13	-1.6
3,698,051	-		DZA65_RS17120	0.13	+0.5
3,698,051	-		DZA65_RS17120	0.13	-0.7
3,698,051	-		DZA65_RS17120	0.13	+0.3
3,698,051	-		DZA65_RS17120	0.13	+1.0
3,698,330	+		DZA65_RS17120	0.24	-0.1
3,698,330	+		DZA65_RS17120	0.24	+0.3
3,698,330	+		DZA65_RS17120	0.24	-0.6
3,698,331	-		DZA65_RS17120	0.24	-1.3
3,698,331	-		DZA65_RS17120	0.24	-0.7
3,698,331	-		DZA65_RS17120	0.24	-0.5
3,698,697	+		DZA65_RS17120	0.39	-0.3
3,698,976	-		DZA65_RS17120	0.50	+1.5
3,699,068	+		DZA65_RS17120	0.54	-0.4
3,699,272	+		DZA65_RS17120	0.62	-1.8
3,699,272	+		DZA65_RS17120	0.62	-0.1
3,699,273	-		DZA65_RS17120	0.62	-0.3
3,699,273	-		DZA65_RS17120	0.62	+1.0
3,699,273	-		DZA65_RS17120	0.62	-1.3
3,699,305	+		DZA65_RS17120	0.64	-0.4
3,699,305	+		DZA65_RS17120	0.64	+0.3
3,699,356	+		DZA65_RS17120	0.66	-0.7
3,699,402	+		DZA65_RS17120	0.67	-0.7
3,699,402	+		DZA65_RS17120	0.67	-2.0
3,699,402	+		DZA65_RS17120	0.67	-0.3
3,699,402	+		DZA65_RS17120	0.67	+0.6
3,699,403	-		DZA65_RS17120	0.68	-0.9
3,699,408	-		DZA65_RS17120	0.68	-0.6
3,699,469	+		DZA65_RS17120	0.70	+0.4
3,699,482	+		DZA65_RS17120	0.71	-2.3
3,699,513	+		DZA65_RS17120	0.72	-1.0
3,699,514	-		DZA65_RS17120	0.72	-0.7
3,699,646	+		DZA65_RS17120	0.77	-0.7
3,699,647	-		DZA65_RS17120	0.77	+0.7
3,699,702	+		DZA65_RS17120	0.80	+0.6
3,699,702	+		DZA65_RS17120	0.80	+0.3
3,699,702	+		DZA65_RS17120	0.80	+0.7
3,699,703	-		DZA65_RS17120	0.80	-1.6
3,699,705	+		DZA65_RS17120	0.80	+0.6
3,699,706	-		DZA65_RS17120	0.80	-0.8
3,699,706	-		DZA65_RS17120	0.80	-0.8
3,699,706	-		DZA65_RS17120	0.80	-0.3
3,700,049	+				+0.6
3,700,049	+				-2.1
3,700,049	+				+0.6
3,700,049	+				+0.9
3,700,050	-				+0.6
3,700,052	+				+0.1
3,700,052	+				+0.2
3,700,052	+				-0.1
3,700,052	+				-0.3
3,700,053	-				-2.2
3,700,053	-				-0.0
3,700,053	-				+1.0
3,700,053	-				-2.1
3,700,053	-				-0.5
3,700,197	+				-0.6
3,700,198	-				-1.5
3,700,217	+				+0.6
3,700,277	+				-2.6
3,700,278	-				-0.8
3,700,281	+				+2.1
3,700,281	+				+0.7
3,700,282	-				-0.4
3,700,282	-				-2.0
3,700,282	-				-1.6
3,700,282	-				-0.2
3,700,282	-				+1.0
3,700,290	+				+1.2
3,700,290	+				-0.2
3,700,290	+				-1.1
3,700,291	-				-1.3
3,700,291	-				-1.3
3,700,291	-				-1.4
3,700,291	-				-1.1
3,700,298	+				+0.1
3,700,298	+				+0.1
3,700,298	+				-3.3
3,700,298	+				+0.2
3,700,298	+				-0.3
3,700,299	-				-0.5
3,700,299	-				+0.4
3,700,303	-				+0.2
3,700,303	-				-0.1
3,700,303	-				+1.1
3,700,303	-				-0.9
3,700,358	+				-0.3
3,700,378	+				-1.7
3,700,378	+				+1.3
3,700,379	-				-0.7
3,700,379	-				-0.6
3,700,379	-				+0.1
3,700,379	-				-0.5
3,700,384	+				+1.1
3,700,384	+				+0.1
3,700,384	+				-0.6
3,700,384	+				-1.1
3,700,384	+				-1.0
3,700,384	+				-1.6
3,700,385	-				-1.7
3,700,385	-				+0.1
3,700,388	+				-1.0
3,700,388	+				+0.2
3,700,389	-				+0.1
3,700,389	-				+1.1
3,700,400	+				+1.1
3,700,400	+				-0.5
3,700,400	+				-3.3
3,700,400	+				-0.3
3,700,400	+				+0.5
3,700,400	+				-0.6
3,700,401	-				-0.8
3,700,401	-				-2.1
3,700,401	-				+0.3
3,700,401	-				-1.4
3,700,401	-				+0.6
3,700,498	+		DZA65_RS17125	0.12	-0.2
3,700,498	+		DZA65_RS17125	0.12	+0.3
3,700,498	+		DZA65_RS17125	0.12	+0.6
3,700,498	+		DZA65_RS17125	0.12	-0.8
3,700,498	+		DZA65_RS17125	0.12	+0.3
3,700,498	+		DZA65_RS17125	0.12	+0.3
3,700,498	+		DZA65_RS17125	0.12	+0.3
3,700,499	-		DZA65_RS17125	0.12	-0.7
3,700,499	-				-0.3
3,700,499	-		DZA65_RS17125	0.12	-0.3
3,700,499	-		DZA65_RS17125	0.12	+0.1
3,700,649	+		DZA65_RS17125	0.40	+0.7
3,700,649	+		DZA65_RS17125	0.40	-0.9
3,700,650	-		DZA65_RS17125	0.40	+0.2
3,700,656	-		DZA65_RS17125	0.42	-0.1
3,700,745	+		DZA65_RS17125	0.58	+0.9
3,700,746	-		DZA65_RS17125	0.58	-1.7
3,700,746	-		DZA65_RS17125	0.58	-0.4
3,700,746	-		DZA65_RS17125	0.58	-1.4
3,700,751	-		DZA65_RS17125	0.59	+0.4
3,700,780	-		DZA65_RS17125	0.65	-1.3
3,700,808	+		DZA65_RS17125	0.70	+0.4
3,700,809	-		DZA65_RS17125	0.70	-0.1
3,700,809	-		DZA65_RS17125	0.70	-2.3
3,700,894	+		DZA65_RS17125	0.86	+0.9
3,700,895	-		DZA65_RS17125	0.86	+0.3
3,700,896	+		DZA65_RS17125	0.87	-1.8
3,700,975	+				-0.5
3,700,975	+				-1.3
3,700,975	+				-0.1
3,700,975	+				-2.3
3,700,975	+				-0.1
3,700,975	+				+0.6
3,700,975	+				-0.3
3,700,975	+				-0.4
3,700,976	-				-1.5
3,700,976	-				-2.1
3,700,976	-				-1.7
3,700,976	-				-1.0
3,700,976	-				-1.8
3,700,976	-				+0.3
3,701,025	+				-0.9
3,701,025	+				+0.4
3,701,025	+				+1.3
3,701,026	-				+0.7
3,701,026	-				+0.2
3,701,137	-		DZA65_RS17130	0.22	-0.6
3,701,137	-		DZA65_RS17130	0.22	+0.3
3,701,137	-		DZA65_RS17130	0.22	-4.1
3,701,166	+		DZA65_RS17130	0.26	-0.1
3,701,167	-		DZA65_RS17130	0.26	-0.9
3,701,167	-		DZA65_RS17130	0.26	-0.3
3,701,174	+		DZA65_RS17130	0.27	-1.1
3,701,175	-		DZA65_RS17130	0.27	-2.1