Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15895

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,450,305	+				+1.0
3,450,305	+				-0.9
3,450,414	+				-2.8
3,450,425	+				+0.1
3,450,428	-				-0.3
3,450,433	+				-0.3
3,450,433	+				+1.0
3,450,433	+				+0.7
3,450,434	-				-0.1
3,450,434	-				-0.2
3,450,434	-				-0.5
3,450,434	-				-2.1
3,450,437	+				-0.2
3,450,438	-				+0.2
3,450,438	-				-0.8
3,450,438	-				+0.5
3,450,466	+				+0.0
3,450,466	+				-0.9
3,450,467	-				+1.4
3,450,467	-				+0.9
3,450,511	+				+0.0
3,450,511	+				-0.7
3,450,535	+				-1.3
3,450,535	+				-1.3
3,450,535	+				-1.3
3,450,535	+				+0.0
3,450,536	-				+0.3
3,450,536	-				-0.3
3,450,538	+				-0.7
3,450,538	+				-0.3
3,450,538	+				-0.9
3,450,538	+				+0.9
3,450,538	+				-0.9
3,450,538	+				+0.1
3,450,539	-				+0.7
3,450,539	-				-1.2
3,450,539	-				-1.0
3,450,539	-				+1.3
3,450,539	-				-2.1
3,450,539	-				+0.2
3,450,555	+				+0.3
3,450,556	-				+2.0
3,450,556	-				+0.4
3,450,556	-				-1.9
3,450,556	-				+1.1
3,450,619	+				+0.7
3,450,649	+				-0.0
3,450,649	+				-0.6
3,450,649	+				+0.7
3,450,649	+				-1.3
3,450,650	-				-0.3
3,450,650	-				+1.7
3,450,650	-				+0.9
3,450,650	-				-0.3
3,450,650	-				+0.3
3,450,653	-				-0.7
3,450,677	+				+0.9
3,450,678	-				-0.8
3,450,698	+				+0.9
3,450,698	+				+0.5
3,450,698	+				+0.1
3,450,699	-				-0.1
3,450,699	-				-0.5
3,450,699	-				-1.0
3,450,699	-				+0.8
3,450,714	+				-2.1
3,450,715	-				-0.3
3,450,715	-				-0.6
3,450,725	+				+0.5
3,450,725	+				+0.5
3,450,725	+				+0.5
3,450,725	+				-0.3
3,450,725	+				-0.3
3,450,725	+				+0.9
3,450,726	-				-0.7
3,450,726	-				+0.7
3,450,726	-				+0.5
3,450,726	-				-1.5
3,450,726	-				+0.2
3,450,726	-				-1.1
3,450,726	-				-0.6
3,450,726	-				+2.3
3,450,726	-				+0.2
3,450,726	-				+1.0
3,450,726	-				+0.1
3,450,726	-				+0.4
3,450,727	+				-1.6
3,450,727	+				-1.3
3,450,727	+				+1.4
3,450,727	+				-0.0
3,450,727	+				+0.9
3,450,727	+				+0.4
3,450,727	+				-0.1
3,450,727	+				+0.3
3,450,727	+				-0.1
3,450,728	-				-1.7
3,450,728	-				+0.1
3,450,728	-				+1.3
3,450,728	-				+0.2
3,450,850	+		DZA65_RS15890	0.27	+1.9
3,450,850	+		DZA65_RS15890	0.27	-2.9
3,450,850	+		DZA65_RS15890	0.27	+1.4
3,450,850	+		DZA65_RS15890	0.27	+0.3
3,450,850	+		DZA65_RS15890	0.27	+2.3
3,450,850	+		DZA65_RS15890	0.27	-1.1
3,450,850	+		DZA65_RS15890	0.27	+0.5
3,450,850	+		DZA65_RS15890	0.27	-0.3
3,450,850	+		DZA65_RS15890	0.27	+0.2
3,450,850	+		DZA65_RS15890	0.27	+0.4
3,450,850	+		DZA65_RS15890	0.27	-0.3
3,450,851	-		DZA65_RS15890	0.27	+0.1
3,450,851	-		DZA65_RS15890	0.27	-0.5
3,450,851	-		DZA65_RS15890	0.27	-1.3
3,450,851	-		DZA65_RS15890	0.27	+0.4
3,450,851	-		DZA65_RS15890	0.27	-2.7
3,450,851	-		DZA65_RS15890	0.27	+0.2
3,450,851	-		DZA65_RS15890	0.27	-0.1
3,450,875	-		DZA65_RS15890	0.31	+0.7
3,450,891	+		DZA65_RS15890	0.34	+0.8
3,450,954	+		DZA65_RS15890	0.45	-0.1
3,450,954	+		DZA65_RS15890	0.45	+1.5
3,450,954	+		DZA65_RS15890	0.45	-0.7
3,450,954	+		DZA65_RS15890	0.45	+0.2
3,450,954	+		DZA65_RS15890	0.45	+1.1
3,450,955	-		DZA65_RS15890	0.45	+0.2
3,450,955	-		DZA65_RS15890	0.45	-1.2
3,450,955	-		DZA65_RS15890	0.45	-0.3
3,450,955	-		DZA65_RS15890	0.45	+1.0
3,450,981	-		DZA65_RS15890	0.49	+0.4
3,450,981	-		DZA65_RS15890	0.49	-0.2
3,450,983	+		DZA65_RS15890	0.50	+0.1
3,450,983	+		DZA65_RS15890	0.50	-1.9
3,450,983	+		DZA65_RS15890	0.50	+0.2
3,450,983	+		DZA65_RS15890	0.50	+0.2
3,450,984	-		DZA65_RS15890	0.50	-0.2
3,450,984	-		DZA65_RS15890	0.50	+0.8
3,450,984	-		DZA65_RS15890	0.50	+1.1
3,450,984	-		DZA65_RS15890	0.50	+0.7
3,450,984	-		DZA65_RS15890	0.50	+0.1
3,450,984	-		DZA65_RS15890	0.50	+0.8
3,450,984	-		DZA65_RS15890	0.50	+1.0
3,450,984	-		DZA65_RS15890	0.50	+0.2
3,450,984	-		DZA65_RS15890	0.50	-0.9
3,450,984	-		DZA65_RS15890	0.50	+0.7
3,450,984	-		DZA65_RS15890	0.50	+0.7
3,450,984	-		DZA65_RS15890	0.50	-1.7
3,450,994	-		DZA65_RS15890	0.52	+0.0
3,451,059	+		DZA65_RS15890	0.63	+0.3
3,451,059	+		DZA65_RS15890	0.63	+0.7
3,451,060	-		DZA65_RS15890	0.63	+1.1
3,451,060	-		DZA65_RS15890	0.63	+0.7
3,451,060	-		DZA65_RS15890	0.63	+1.0
3,451,063	+		DZA65_RS15890	0.63	-0.2
3,451,063	+		DZA65_RS15890	0.63	-0.1
3,451,064	-		DZA65_RS15890	0.64	-0.2
3,451,064	-		DZA65_RS15890	0.64	-0.0
3,451,064	-		DZA65_RS15890	0.64	-0.7
3,451,064	-		DZA65_RS15890	0.64	-0.1
3,451,064	-		DZA65_RS15890	0.64	+1.7
3,451,064	-		DZA65_RS15890	0.64	+0.3
3,451,064	-				+1.7
3,451,093	+		DZA65_RS15890	0.69	+1.5
3,451,094	-		DZA65_RS15890	0.69	+0.7
3,451,094	-		DZA65_RS15890	0.69	+1.1
3,451,094	-		DZA65_RS15890	0.69	-1.1
3,451,094	-		DZA65_RS15890	0.69	+1.2
3,451,117	+		DZA65_RS15890	0.73	+1.4
3,451,117	+		DZA65_RS15890	0.73	-0.2
3,451,117	+		DZA65_RS15890	0.73	+0.3
3,451,118	-		DZA65_RS15890	0.73	-0.6
3,451,118	-		DZA65_RS15890	0.73	-0.3
3,451,118	-		DZA65_RS15890	0.73	+0.1
3,451,148	-				+0.7
3,451,148	-		DZA65_RS15890	0.78	-2.2
3,451,179	+		DZA65_RS15890	0.83	+0.3
3,451,221	+				+0.2
3,451,221	+				-1.1
3,451,222	-				-0.3
3,451,222	-				+0.7
3,451,222	-				+0.3
3,451,228	-				+0.9
3,451,266	+				-1.9
3,451,267	-				-0.3
3,451,270	+				+0.9
3,451,271	-				+0.2
3,451,312	-				+1.3
3,451,312	-				-0.1
3,451,441	+		DZA65_RS15895	0.20	+0.4
3,451,442	-		DZA65_RS15895	0.20	+0.2
3,451,454	+		DZA65_RS15895	0.22	-0.3
3,451,455	-		DZA65_RS15895	0.22	+0.1
3,451,507	+		DZA65_RS15895	0.29	-0.3
3,451,508	-		DZA65_RS15895	0.29	-1.0
3,451,508	-		DZA65_RS15895	0.29	-0.2
3,451,531	+		DZA65_RS15895	0.32	-1.9
3,451,532	-		DZA65_RS15895	0.32	+0.7
3,451,532	-		DZA65_RS15895	0.32	-1.5
3,451,532	-		DZA65_RS15895	0.32	-1.9
3,451,584	+		DZA65_RS15895	0.39	-1.2
3,451,585	-				+0.7
3,451,591	-		DZA65_RS15895	0.40	+0.7
3,451,591	-		DZA65_RS15895	0.40	+0.5
3,451,626	+		DZA65_RS15895	0.45	-0.1
3,451,626	+		DZA65_RS15895	0.45	+0.7
3,451,627	-		DZA65_RS15895	0.45	-0.5
3,451,627	-		DZA65_RS15895	0.45	+0.5
3,451,675	-		DZA65_RS15895	0.51	-2.1
3,451,678	+		DZA65_RS15895	0.52	-0.5
3,451,678	+		DZA65_RS15895	0.52	+1.2
3,451,678	+		DZA65_RS15895	0.52	-0.5
3,451,678	+		DZA65_RS15895	0.52	+1.0
3,451,678	+		DZA65_RS15895	0.52	+0.2
3,451,678	+		DZA65_RS15895	0.52	+0.3
3,451,679	-		DZA65_RS15895	0.52	+1.3
3,451,679	-		DZA65_RS15895	0.52	+0.2
3,451,679	-		DZA65_RS15895	0.52	+0.1
3,451,691	+		DZA65_RS15895	0.53	+0.0
3,451,691	+		DZA65_RS15895	0.53	+0.6
3,451,691	+		DZA65_RS15895	0.53	-0.5
3,451,691	+		DZA65_RS15895	0.53	+0.3
3,451,692	-		DZA65_RS15895	0.53	-0.1
3,451,706	+		DZA65_RS15895	0.55	+0.7
3,451,707	-		DZA65_RS15895	0.55	+1.2
3,451,743	+		DZA65_RS15895	0.60	+0.5
3,451,744	-		DZA65_RS15895	0.60	-0.4
3,451,764	-		DZA65_RS15895	0.63	-1.3
3,451,766	+		DZA65_RS15895	0.63	-0.4
3,451,766	+		DZA65_RS15895	0.63	+1.7
3,451,766	+		DZA65_RS15895	0.63	-0.2
3,451,766	+		DZA65_RS15895	0.63	-0.1
3,451,766	+		DZA65_RS15895	0.63	-0.4
3,451,767	-		DZA65_RS15895	0.63	+0.2
3,451,767	-		DZA65_RS15895	0.63	-0.8
3,451,767	-		DZA65_RS15895	0.63	-0.1
3,451,767	-		DZA65_RS15895	0.63	-0.4
3,451,767	-		DZA65_RS15895	0.63	-0.3
3,451,767	-		DZA65_RS15895	0.63	+0.2
3,451,767	-		DZA65_RS15895	0.63	-1.3
3,451,767	-		DZA65_RS15895	0.63	+0.3
3,451,767	-		DZA65_RS15895	0.63	-0.0
3,451,770	+		DZA65_RS15895	0.64	+0.5
3,451,770	+		DZA65_RS15895	0.64	-0.9
3,451,770	+		DZA65_RS15895	0.64	+0.7
3,451,770	+		DZA65_RS15895	0.64	+0.1
3,451,770	+		DZA65_RS15895	0.64	+0.2
3,451,771	-		DZA65_RS15895	0.64	-1.8
3,451,771	-		DZA65_RS15895	0.64	+0.8
3,451,771	-		DZA65_RS15895	0.64	+0.2
3,451,776	+		DZA65_RS15895	0.65	+0.2
3,451,776	+		DZA65_RS15895	0.65	-0.9
3,451,776	+		DZA65_RS15895	0.65	-0.1
3,451,776	+		DZA65_RS15895	0.65	-0.8
3,451,776	+		DZA65_RS15895	0.65	-0.5
3,451,777	-		DZA65_RS15895	0.65	-0.3
3,451,777	-		DZA65_RS15895	0.65	+0.1
3,451,777	-		DZA65_RS15895	0.65	-0.8
3,451,777	-		DZA65_RS15895	0.65	-1.3
3,451,777	-		DZA65_RS15895	0.65	-0.4
3,451,777	-		DZA65_RS15895	0.65	-1.0
3,451,810	+		DZA65_RS15895	0.69	-0.9
3,451,810	+		DZA65_RS15895	0.69	-0.3
3,451,810	+		DZA65_RS15895	0.69	-1.3
3,451,811	-		DZA65_RS15895	0.69	+1.5
3,451,837	-		DZA65_RS15895	0.73	-0.9
3,451,837	-		DZA65_RS15895	0.73	-0.3
3,451,837	-		DZA65_RS15895	0.73	+0.1
3,451,837	-		DZA65_RS15895	0.73	-1.9
3,451,857	+		DZA65_RS15895	0.75	-1.0
3,451,860	+		DZA65_RS15895	0.76	+0.5
3,451,860	+				-0.3
3,451,860	+		DZA65_RS15895	0.76	+0.1
3,451,860	+		DZA65_RS15895	0.76	-0.8
3,451,860	+		DZA65_RS15895	0.76	-1.3
3,451,860	+		DZA65_RS15895	0.76	-0.7
3,451,861	-		DZA65_RS15895	0.76	+0.1
3,451,861	-		DZA65_RS15895	0.76	-1.1
3,451,861	-		DZA65_RS15895	0.76	-0.5
3,451,861	-		DZA65_RS15895	0.76	-0.2
3,451,861	-		DZA65_RS15895	0.76	-0.3
3,451,861	-		DZA65_RS15895	0.76	-0.7
3,451,966	+				+0.1
3,451,966	+				-2.7
3,451,966	+				+0.8
3,451,966	+				-1.5
3,451,966	+				-0.4
3,451,966	+				-1.9
3,451,966	+				-0.3
3,451,967	-				+0.4
3,451,967	-				-1.3
3,451,967	-				+0.5
3,451,967	-				+0.4
3,451,967	-				+0.0
3,451,967	-				-0.8
3,451,967	-				+0.7
3,451,967	-				-1.1
3,452,032	+				+0.7
3,452,033	-				+0.9
3,452,042	+				-1.3
3,452,042	+				+0.8
3,452,042	+				+0.3
3,452,042	+				+1.2
3,452,042	+				-0.5
3,452,043	-				+0.1
3,452,046	+				-1.3
3,452,047	-				+0.7
3,452,047	-				-0.9
3,452,047	-				-0.9
3,452,047	-				+1.2
3,452,047	-				+0.0
3,452,047	-				-0.6
3,452,047	-				+1.1
3,452,071	+				+0.8
3,452,072	-				+1.1
3,452,072	-				-0.1
3,452,072	-				-2.1
3,452,112	+		DZA65_RS15900	0.11	-0.6
3,452,112	+		DZA65_RS15900	0.11	+0.9
3,452,113	-		DZA65_RS15900	0.12	-0.7
3,452,214	-		DZA65_RS15900	0.39	+0.8
3,452,237	+		DZA65_RS15900	0.46	-0.2
3,452,380	+		DZA65_RS15900	0.85	+0.2
3,452,381	-		DZA65_RS15900	0.85	+1.8
3,452,381	-		DZA65_RS15900	0.85	-0.3
3,452,420	+				+1.1
3,452,420	+				+0.6
3,452,420	+				-2.5
3,452,421	-				-1.2
3,452,421	-				+0.2
3,452,421	-				+0.3
3,452,456	+				+0.3
3,452,456	+				+0.1
3,452,457	-				-0.3
3,452,458	+				-1.8
3,452,459	-				-0.5
3,452,459	-				-0.9
3,452,459	-				-0.5
3,452,459	-				-1.1
3,452,459	-				+0.7
3,452,483	-				-1.3
3,452,502	+				-1.6
3,452,508	+				+0.3
3,452,509	-				+0.1
3,452,509	-				-2.0
3,452,509	-				+0.4
3,452,509	-				-0.1
3,452,510	+				-0.1
3,452,510	+				+0.2
3,452,561	-				+1.3
3,452,561	-				-1.1
3,452,582	-				-2.5
3,452,599	+				-2.3
3,452,623	+				+0.9
3,452,623	+				+0.3
3,452,623	+				-1.1
3,452,624	-				-1.1
3,452,624	-				-1.3
3,452,624	-				+0.2
3,452,627	+				+0.0
3,452,627	+				+0.9
3,452,627	+				-1.4
3,452,627	+				+0.4
3,452,627	+				-0.1
3,452,628	-				-0.2
3,452,628	-				-0.8
3,452,662	+				+0.2
3,452,668	+				-2.0
3,452,669	-				-1.7
3,452,682	+				+0.3
3,452,718	-				+1.0
3,452,718	-				+0.1
3,452,774	+				-0.3
3,452,774	+				-0.0
3,452,775	-				-1.9
3,452,828	+				+0.1
3,452,828	+				+1.2
3,452,828	+				-0.3
3,452,829	-				-0.0
3,452,829	-				+1.1
3,452,829	-				-0.3
3,452,872	+		DZA65_RS15905	0.14	-0.5
3,452,872	+		DZA65_RS15905	0.14	+0.7
3,452,873	-		DZA65_RS15905	0.14	-0.3
3,452,873	-		DZA65_RS15905	0.14	-0.2
3,452,922	-		DZA65_RS15905	0.19	+0.2
3,452,922	-		DZA65_RS15905	0.19	+0.5
3,452,945	-		DZA65_RS15905	0.22	-1.3
3,452,945	-		DZA65_RS15905	0.22	+0.3
3,452,963	+		DZA65_RS15905	0.24	+0.2
3,452,963	+		DZA65_RS15905	0.24	+0.7
3,452,963	+		DZA65_RS15905	0.24	-0.7
3,452,964	-		DZA65_RS15905	0.24	+0.8
3,452,964	-		DZA65_RS15905	0.24	+1.7
3,452,964	-		DZA65_RS15905	0.24	+1.7
3,452,964	-		DZA65_RS15905	0.24	+1.0
3,452,964	-		DZA65_RS15905	0.24	+1.3
3,452,964	-		DZA65_RS15905	0.24	-0.8
3,453,008	+		DZA65_RS15905	0.28	-0.8
3,453,008	+		DZA65_RS15905	0.28	-1.3
3,453,009	-		DZA65_RS15905	0.29	-2.1