Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08605

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,817,400	+		DZA65_RS08600	0.49	-0.4
1,817,401	-		DZA65_RS08600	0.49	-0.8
1,817,401	-		DZA65_RS08600	0.49	-2.1
1,817,557	+		DZA65_RS08600	0.60	+1.0
1,817,557	+		DZA65_RS08600	0.60	+0.2
1,817,557	+		DZA65_RS08600	0.60	+0.7
1,817,558	-		DZA65_RS08600	0.60	-0.4
1,817,558	-		DZA65_RS08600	0.60	+0.2
1,817,558	-		DZA65_RS08600	0.60	+0.5
1,817,558	-		DZA65_RS08600	0.60	+0.4
1,817,558	-				+0.0
1,818,025	+				+1.5
1,818,026	-				+0.0
1,818,026	-				+0.9
1,818,026	-				-0.4
1,818,026	-				-0.3
1,818,124	+				-0.9
1,818,125	-				-0.5
1,818,125	-				-1.5
1,818,125	-				-0.1
1,818,151	+				+0.9
1,818,151	+				-0.3
1,818,151	+				-0.7
1,818,151	+				+1.8
1,818,151	+				+0.0
1,818,151	+				+0.1
1,818,151	+				+1.3
1,818,151	+				+0.2
1,818,151	+				-1.7
1,818,151	+				-2.3
1,818,151	+				-0.2
1,818,151	+				-0.1
1,818,151	+				+0.3
1,818,151	+				-3.2
1,818,151	+				+0.1
1,818,152	-				-1.5
1,818,152	-				+0.5
1,818,152	-				+0.6
1,818,152	-				+1.0
1,818,152	-				+0.4
1,818,152	-				-1.9
1,818,152	-				-0.5
1,818,169	+				+0.5
1,818,170	-				+0.9
1,818,276	+				-0.4
1,818,276	+				+0.3
1,818,449	+				+0.8
1,818,449	+				-0.4
1,818,449	+				+0.3
1,818,449	+				+0.4
1,818,449	+				-0.5
1,818,450	-				+0.5
1,818,450	-				-2.3
1,818,450	-				-0.1
1,818,450	-				-0.3
1,818,450	-				-0.2
1,818,524	+		DZA65_RS08605	0.11	+0.5
1,818,525	-				-1.1
1,818,539	+		DZA65_RS08605	0.11	+0.1
1,818,540	-				+2.0
1,818,568	+		DZA65_RS08605	0.12	+1.0
1,818,835	+		DZA65_RS08605	0.20	-0.1
1,818,884	+		DZA65_RS08605	0.21	-1.9
1,818,884	+		DZA65_RS08605	0.21	+0.1
1,818,884	+		DZA65_RS08605	0.21	+0.6
1,818,884	+		DZA65_RS08605	0.21	-0.5
1,818,885	-		DZA65_RS08605	0.21	-0.8
1,818,885	-		DZA65_RS08605	0.21	-1.7
1,818,925	+		DZA65_RS08605	0.22	-1.7
1,818,950	+		DZA65_RS08605	0.23	-0.8
1,818,950	+		DZA65_RS08605	0.23	-0.3
1,818,951	-		DZA65_RS08605	0.23	+0.2
1,818,951	-		DZA65_RS08605	0.23	+0.3
1,818,951	-		DZA65_RS08605	0.23	+1.5
1,818,951	-		DZA65_RS08605	0.23	+0.2
1,818,951	-		DZA65_RS08605	0.23	+0.3
1,818,973	+		DZA65_RS08605	0.23	+0.6
1,818,999	-		DZA65_RS08605	0.24	-0.5
1,818,999	-		DZA65_RS08605	0.24	-0.9
1,818,999	-		DZA65_RS08605	0.24	+0.5
1,818,999	-		DZA65_RS08605	0.24	+0.9
1,819,129	+		DZA65_RS08605	0.28	-0.8
1,819,129	+		DZA65_RS08605	0.28	-1.9
1,819,129	+		DZA65_RS08605	0.28	-0.1
1,819,130	-		DZA65_RS08605	0.28	-2.1
1,819,177	+		DZA65_RS08605	0.29	+1.1
1,819,178	-		DZA65_RS08605	0.29	+1.1
1,819,178	-		DZA65_RS08605	0.29	-0.4
1,819,186	+		DZA65_RS08605	0.30	+1.8
1,819,186	+		DZA65_RS08605	0.30	+2.6
1,819,186	+		DZA65_RS08605	0.30	+0.4
1,819,220	+		DZA65_RS08605	0.31	+1.7
1,819,221	-		DZA65_RS08605	0.31	+0.1
1,819,221	-		DZA65_RS08605	0.31	+0.5
1,819,289	+		DZA65_RS08605	0.33	-2.9
1,819,289	+		DZA65_RS08605	0.33	+0.2
1,819,289	+		DZA65_RS08605	0.33	-0.0
1,819,289	+		DZA65_RS08605	0.33	-0.9
1,819,289	+		DZA65_RS08605	0.33	+0.2
1,819,290	-		DZA65_RS08605	0.33	-0.3
1,819,290	-		DZA65_RS08605	0.33	-0.8
1,819,290	-		DZA65_RS08605	0.33	-0.0
1,819,290	-		DZA65_RS08605	0.33	-0.1
1,819,305	-		DZA65_RS08605	0.33	+0.8
1,819,372	+		DZA65_RS08605	0.35	+0.3
1,819,402	+		DZA65_RS08605	0.36	+0.3
1,819,402	+		DZA65_RS08605	0.36	+1.1
1,819,403	-		DZA65_RS08605	0.36	+0.4
1,819,403	-		DZA65_RS08605	0.36	-0.8
1,819,414	-		DZA65_RS08605	0.36	-2.9
1,819,550	-		DZA65_RS08605	0.40	-1.5
1,819,715	+		DZA65_RS08605	0.45	-0.3
1,819,715	+		DZA65_RS08605	0.45	+0.9
1,819,715	+		DZA65_RS08605	0.45	-0.5
1,819,715	+		DZA65_RS08605	0.45	+0.5
1,819,715	+		DZA65_RS08605	0.45	-0.5
1,819,715	+		DZA65_RS08605	0.45	+0.1
1,819,715	+		DZA65_RS08605	0.45	+0.2
1,819,715	+		DZA65_RS08605	0.45	-0.1
1,819,716	-		DZA65_RS08605	0.45	-0.1
1,819,726	+		DZA65_RS08605	0.45	+0.3
1,819,726	+		DZA65_RS08605	0.45	-1.0
1,819,726	+		DZA65_RS08605	0.45	+0.5
1,819,727	-		DZA65_RS08605	0.45	+0.7
1,819,727	-		DZA65_RS08605	0.45	-0.8
1,819,754	+		DZA65_RS08605	0.46	+0.3
1,819,754	+		DZA65_RS08605	0.46	+0.7
1,819,754	+		DZA65_RS08605	0.46	-0.3
1,819,755	-		DZA65_RS08605	0.46	-0.4
1,819,766	-		DZA65_RS08605	0.46	+0.3
1,819,779	-		DZA65_RS08605	0.47	-1.5
1,819,779	-		DZA65_RS08605	0.47	-1.4
1,819,779	-		DZA65_RS08605	0.47	+1.4
1,819,779	-		DZA65_RS08605	0.47	+0.8
1,819,793	+		DZA65_RS08605	0.47	-0.0
1,819,794	-		DZA65_RS08605	0.47	-0.5
1,819,891	+		DZA65_RS08605	0.50	+0.5
1,819,891	+		DZA65_RS08605	0.50	+1.2
1,819,934	-		DZA65_RS08605	0.51	-1.5
1,820,045	-		DZA65_RS08605	0.54	+1.5
1,820,156	+		DZA65_RS08605	0.57	-1.0
1,820,157	-		DZA65_RS08605	0.57	+0.9
1,820,157	-		DZA65_RS08605	0.57	-0.0
1,820,157	-		DZA65_RS08605	0.57	+0.9
1,820,169	-		DZA65_RS08605	0.58	-0.5
1,820,169	-		DZA65_RS08605	0.58	-0.3
1,820,303	+		DZA65_RS08605	0.62	+0.5
1,820,324	+		DZA65_RS08605	0.62	-1.2
1,820,325	-		DZA65_RS08605	0.62	+1.5
1,820,325	-		DZA65_RS08605	0.62	-2.9
1,820,338	+		DZA65_RS08605	0.63	+1.2
1,820,450	+		DZA65_RS08605	0.66	-0.2
1,820,450	+		DZA65_RS08605	0.66	+0.6
1,820,450	+		DZA65_RS08605	0.66	-1.0
1,820,450	+		DZA65_RS08605	0.66	+1.0
1,820,451	-				+0.5
1,820,451	-		DZA65_RS08605	0.66	-0.5
1,820,462	+		DZA65_RS08605	0.66	-1.1
1,820,462	+		DZA65_RS08605	0.66	+1.0
1,820,462	+		DZA65_RS08605	0.66	-0.0
1,820,462	+		DZA65_RS08605	0.66	-0.8
1,820,462	+		DZA65_RS08605	0.66	-0.6
1,820,462	+		DZA65_RS08605	0.66	-2.2
1,820,463	-		DZA65_RS08605	0.66	-0.3
1,820,463	-		DZA65_RS08605	0.66	-1.7
1,820,463	-		DZA65_RS08605	0.66	-0.1
1,820,463	-		DZA65_RS08605	0.66	-0.8
1,820,463	-		DZA65_RS08605	0.66	+0.5
1,820,463	-		DZA65_RS08605	0.66	+0.2
1,820,463	-		DZA65_RS08605	0.66	+0.2
1,820,463	-		DZA65_RS08605	0.66	+1.3
1,820,463	-		DZA65_RS08605	0.66	+0.2
1,820,463	-		DZA65_RS08605	0.66	+0.1
1,820,495	-		DZA65_RS08605	0.67	+0.1
1,820,536	+		DZA65_RS08605	0.68	-1.2
1,820,536	+		DZA65_RS08605	0.68	+0.5
1,820,537	-		DZA65_RS08605	0.68	+1.0
1,820,552	-		DZA65_RS08605	0.69	+0.6
1,820,759	+		DZA65_RS08605	0.75	-0.7
1,820,760	-		DZA65_RS08605	0.75	-0.5
1,820,765	+		DZA65_RS08605	0.75	+0.6
1,820,765	+		DZA65_RS08605	0.75	-0.0
1,820,766	-		DZA65_RS08605	0.75	+1.5
1,820,766	-		DZA65_RS08605	0.75	-0.0
1,820,873	+				-1.5
1,820,873	+		DZA65_RS08605	0.78	+1.2
1,820,873	+		DZA65_RS08605	0.78	+0.1
1,820,873	+		DZA65_RS08605	0.78	+1.6
1,820,873	+		DZA65_RS08605	0.78	+0.9
1,820,873	+		DZA65_RS08605	0.78	-0.5
1,820,873	+		DZA65_RS08605	0.78	+1.3
1,820,874	-		DZA65_RS08605	0.78	+0.5
1,820,874	-		DZA65_RS08605	0.78	+0.6
1,820,874	-		DZA65_RS08605	0.78	+1.5
1,821,113	+		DZA65_RS08605	0.85	+1.5
1,821,113	+		DZA65_RS08605	0.85	+0.3
1,821,113	+		DZA65_RS08605	0.85	-0.5
1,821,113	+		DZA65_RS08605	0.85	+0.2
1,821,114	-		DZA65_RS08605	0.85	+0.1
1,821,149	-		DZA65_RS08605	0.86	-1.5
1,821,149	-		DZA65_RS08605	0.86	+0.0
1,821,149	-		DZA65_RS08605	0.86	+0.5
1,821,228	+		DZA65_RS08605	0.88	+0.7
1,821,229	-		DZA65_RS08605	0.88	-0.0
1,821,229	-		DZA65_RS08605	0.88	-0.9
1,821,229	-		DZA65_RS08605	0.88	-0.7
1,821,232	+		DZA65_RS08605	0.88	+0.8
1,821,232	+		DZA65_RS08605	0.88	-0.2
1,821,232	+		DZA65_RS08605	0.88	-0.9
1,821,232	+		DZA65_RS08605	0.88	-0.5
1,821,233	-		DZA65_RS08605	0.88	+1.0
1,821,233	-		DZA65_RS08605	0.88	-2.7
1,821,233	-		DZA65_RS08605	0.88	+0.6
1,821,255	+		DZA65_RS08605	0.89	+1.1
1,821,255	+		DZA65_RS08605	0.89	-1.4
1,821,255	+		DZA65_RS08605	0.89	+0.2
1,821,256	-		DZA65_RS08605	0.89	+1.1
1,821,256	-		DZA65_RS08605	0.89	+0.1
1,821,256	-		DZA65_RS08605	0.89	+0.3
1,821,256	-		DZA65_RS08605	0.89	-0.2
1,821,335	+				-1.5
1,821,336	-				+0.3
1,821,382	+				+0.5
1,821,383	-				-1.1
1,821,520	+				-0.1
1,821,520	+				+0.3
1,821,520	+				-2.7
1,821,521	-				+0.2
1,821,521	-				-0.2
1,821,521	-				+0.0
1,821,521	-				-0.2
1,821,573	-				-2.5
1,821,573	-				+1.0
1,821,641	+				-1.3
1,821,641	+				-1.0
1,821,641	+				-1.5
1,821,641	+				-1.0
1,821,642	-				-1.0
1,821,642	-				+0.7
1,821,645	-				-0.4
1,821,697	+				-0.4
1,821,697	+				+0.2
1,821,697	+				+0.9
1,821,698	-				-0.5
1,821,755	+				+0.1
1,821,755	+				+0.4
1,821,766	-				-0.4
1,821,766	-				-3.4
1,821,884	+		DZA65_RS08610	0.13	-0.1
1,821,884	+		DZA65_RS08610	0.13	+0.0
1,821,884	+		DZA65_RS08610	0.13	-0.9
1,821,884	+		DZA65_RS08610	0.13	-0.6
1,821,884	+				+2.5
1,821,884	+		DZA65_RS08610	0.13	+0.5
1,821,885	-		DZA65_RS08610	0.13	+0.1
1,821,885	-		DZA65_RS08610	0.13	+0.5
1,821,885	-		DZA65_RS08610	0.13	+0.9
1,821,885	-		DZA65_RS08610	0.13	+1.5
1,822,064	+		DZA65_RS08610	0.26	+2.6
1,822,065	-		DZA65_RS08610	0.26	+0.0
1,822,065	-		DZA65_RS08610	0.26	-0.4
1,822,065	-		DZA65_RS08610	0.26	+1.5
1,822,098	-		DZA65_RS08610	0.28	-0.1
1,822,098	-		DZA65_RS08610	0.28	+0.9
1,822,199	+		DZA65_RS08610	0.35	+0.5
1,822,199	+		DZA65_RS08610	0.35	-0.1
1,822,271	-		DZA65_RS08610	0.40	-0.9
1,822,271	-		DZA65_RS08610	0.40	-0.2
1,822,411	-		DZA65_RS08610	0.50	-1.0
1,822,515	-		DZA65_RS08610	0.57	+1.5
1,822,565	+		DZA65_RS08610	0.60	-1.1
1,822,566	-		DZA65_RS08610	0.61	+0.6
1,822,567	+				+0.5
1,822,567	+		DZA65_RS08610	0.61	-2.1
1,822,567	+		DZA65_RS08610	0.61	+0.5