Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07890

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,645,922	-		DZA65_RS07885	0.23	+0.3
1,645,922	-		DZA65_RS07885	0.23	+0.4
1,645,922	-		DZA65_RS07885	0.23	-0.6
1,645,922	-		DZA65_RS07885	0.23	-2.5
1,645,948	+		DZA65_RS07885	0.26	+1.4
1,645,949	-		DZA65_RS07885	0.26	+0.4
1,645,977	-		DZA65_RS07885	0.30	+0.2
1,645,977	-		DZA65_RS07885	0.30	+0.7
1,645,979	+		DZA65_RS07885	0.30	-2.8
1,645,979	+		DZA65_RS07885	0.30	-0.9
1,645,979	+		DZA65_RS07885	0.30	-1.9
1,645,979	+		DZA65_RS07885	0.30	+1.2
1,645,979	+		DZA65_RS07885	0.30	-0.3
1,645,979	+				+0.8
1,645,979	+		DZA65_RS07885	0.30	-1.6
1,645,979	+		DZA65_RS07885	0.30	-0.1
1,645,979	+		DZA65_RS07885	0.30	-0.6
1,645,979	+		DZA65_RS07885	0.30	-0.1
1,645,979	+		DZA65_RS07885	0.30	+1.1
1,645,979	+		DZA65_RS07885	0.30	+0.5
1,645,979	+		DZA65_RS07885	0.30	+0.9
1,645,979	+		DZA65_RS07885	0.30	-0.4
1,645,979	+		DZA65_RS07885	0.30	-0.3
1,645,980	-		DZA65_RS07885	0.30	-1.5
1,645,980	-		DZA65_RS07885	0.30	+0.4
1,645,980	-		DZA65_RS07885	0.30	-0.3
1,645,980	-		DZA65_RS07885	0.30	+0.2
1,645,980	-		DZA65_RS07885	0.30	-1.2
1,645,980	-		DZA65_RS07885	0.30	-1.0
1,645,980	-		DZA65_RS07885	0.30	+1.1
1,645,980	-		DZA65_RS07885	0.30	+0.1
1,645,980	-		DZA65_RS07885	0.30	+0.7
1,645,980	-		DZA65_RS07885	0.30	-0.5
1,645,980	-		DZA65_RS07885	0.30	-0.0
1,645,980	-		DZA65_RS07885	0.30	-0.5
1,645,980	-		DZA65_RS07885	0.30	-2.5
1,645,980	-		DZA65_RS07885	0.30	-2.1
1,645,981	+		DZA65_RS07885	0.30	+0.9
1,645,981	+		DZA65_RS07885	0.30	+1.5
1,645,981	+		DZA65_RS07885	0.30	+0.3
1,645,981	+		DZA65_RS07885	0.30	-0.3
1,645,981	+		DZA65_RS07885	0.30	-1.1
1,645,999	+		DZA65_RS07885	0.32	-0.1
1,645,999	+		DZA65_RS07885	0.32	-1.5
1,646,000	-		DZA65_RS07885	0.32	+1.4
1,646,074	+		DZA65_RS07885	0.41	+0.1
1,646,074	+		DZA65_RS07885	0.41	-0.6
1,646,101	+		DZA65_RS07885	0.44	+0.9
1,646,128	+		DZA65_RS07885	0.47	-1.1
1,646,128	+		DZA65_RS07885	0.47	+0.2
1,646,224	+		DZA65_RS07885	0.58	+2.2
1,646,225	-		DZA65_RS07885	0.58	-0.6
1,646,225	-		DZA65_RS07885	0.58	+0.5
1,646,328	-		DZA65_RS07885	0.70	-1.3
1,646,372	-		DZA65_RS07885	0.75	-2.9
1,646,384	+		DZA65_RS07885	0.77	+0.3
1,646,385	-		DZA65_RS07885	0.77	-0.7
1,646,537	+				-0.1
1,646,562	+				+0.2
1,646,563	-				-0.3
1,646,563	-				+1.2
1,646,563	-				+0.3
1,646,566	+				+1.3
1,646,567	-				+0.1
1,646,599	+				+0.8
1,646,618	+				-0.1
1,646,619	-				+0.8
1,646,619	-				-0.5
1,646,619	-				+2.0
1,646,619	-				-0.2
1,646,624	+				-1.9
1,646,624	+				+0.7
1,646,625	-				-0.6
1,646,625	-				+0.4
1,646,628	+				+1.1
1,646,628	+				+1.5
1,646,628	+				+0.8
1,646,628	+				+0.2
1,646,628	+				+1.8
1,646,628	+				-1.5
1,646,628	+				-2.8
1,646,628	+				+0.3
1,646,628	+				-1.5
1,646,628	+				-2.6
1,646,628	+				-1.5
1,646,628	+				-0.9
1,646,628	+				-1.1
1,646,629	-				-0.5
1,646,629	-				+1.2
1,646,629	-				-1.1
1,646,629	-				-0.3
1,646,629	-				+0.3
1,646,629	-				+0.9
1,646,629	-				+0.6
1,646,629	-				-1.1
1,646,633	+				+0.5
1,646,633	+				-0.5
1,646,642	+				-0.1
1,646,643	-				-0.2
1,646,650	+				-0.2
1,646,650	+				-0.2
1,646,650	+				+0.5
1,646,650	+				-2.1
1,646,650	+				+0.3
1,646,650	+				-0.9
1,646,650	+				-0.8
1,646,651	-				-0.9
1,646,651	-				+1.4
1,646,694	+				-0.3
1,646,694	+				-0.2
1,646,694	+				+0.5
1,646,695	-				+0.5
1,646,698	-				-1.5
1,646,747	-				-1.6
1,646,771	+				-2.9
1,646,771	+				-0.9
1,646,771	+				+0.1
1,646,771	+				-0.1
1,646,771	+				+0.0
1,646,771	+				-0.4
1,646,771	+				-1.1
1,646,771	+				-1.6
1,646,771	+				-0.6
1,646,771	+				+0.0
1,646,771	+				-1.3
1,646,771	+				+0.3
1,646,771	+				-0.1
1,646,771	+				+0.9
1,646,772	-				-0.3
1,646,772	-				+0.2
1,646,772	-				-1.3
1,646,772	-				+1.3
1,646,772	-				+1.5
1,646,772	-				-0.4
1,646,772	-				+0.5
1,646,772	-				+0.5
1,646,772	-				-2.1
1,646,772	-				-1.7
1,646,772	-				-2.1
1,646,810	-				+1.7
1,646,868	-				-1.3
1,646,916	+		DZA65_RS07890	0.14	+0.3
1,646,916	+		DZA65_RS07890	0.14	-2.6
1,646,916	+		DZA65_RS07890	0.14	-0.5
1,646,916	+		DZA65_RS07890	0.14	-0.5
1,646,916	+		DZA65_RS07890	0.14	-1.1
1,646,916	+		DZA65_RS07890	0.14	+0.3
1,646,917	-		DZA65_RS07890	0.14	+0.6
1,646,917	-		DZA65_RS07890	0.14	+0.2
1,646,917	-		DZA65_RS07890	0.14	+0.3
1,646,917	-		DZA65_RS07890	0.14	-0.6
1,646,917	-		DZA65_RS07890	0.14	-0.3
1,646,917	-		DZA65_RS07890	0.14	-0.1
1,646,944	-		DZA65_RS07890	0.17	+2.1
1,646,999	+		DZA65_RS07890	0.23	+0.2
1,647,000	-		DZA65_RS07890	0.23	-1.5
1,647,105	+		DZA65_RS07890	0.35	-0.9
1,647,105	+		DZA65_RS07890	0.35	+0.8
1,647,105	+		DZA65_RS07890	0.35	-1.1
1,647,106	-		DZA65_RS07890	0.36	+0.5
1,647,106	-		DZA65_RS07890	0.36	-1.1
1,647,156	+		DZA65_RS07890	0.41	+0.8
1,647,365	-		DZA65_RS07890	0.65	+0.8
1,647,365	-		DZA65_RS07890	0.65	+0.5
1,647,365	-		DZA65_RS07890	0.65	-0.2
1,647,365	-		DZA65_RS07890	0.65	+0.3
1,647,369	+		DZA65_RS07890	0.66	+0.8
1,647,537	-		DZA65_RS07890	0.85	+0.1
1,647,556	+		DZA65_RS07890	0.87	-0.1
1,647,557	-		DZA65_RS07890	0.88	+2.2
1,647,633	+				-2.1
1,647,634	-				+0.1
1,647,634	-				-2.1
1,647,658	+				-0.3
1,647,658	+				+0.4
1,647,658	+				-1.5
1,647,658	+				+0.5
1,647,658	+				+0.1
1,647,658	+				-0.3
1,647,658	+				+2.1
1,647,658	+				-0.2
1,647,658	+				+0.3
1,647,658	+				+0.5
1,647,658	+				+1.4
1,647,658	+				+1.4
1,647,658	+				-0.5
1,647,658	+				+0.1
1,647,658	+				+0.9
1,647,659	-				+1.3
1,647,659	-				+0.3
1,647,659	-				-1.3
1,647,659	-				+1.3
1,647,659	-				+0.8
1,647,659	-				-0.7
1,647,659	-				+0.5
1,647,659	-				+0.4
1,647,659	-				+0.5
1,647,659	-				-0.5
1,647,659	-				-1.3
1,647,659	-				+1.5
1,647,659	-				-0.4
1,647,679	-				+0.4
1,647,679	-				+0.5
1,647,718	-		DZA65_RS07895	0.11	+0.8
1,647,732	-		DZA65_RS07895	0.13	-0.1
1,647,732	-		DZA65_RS07895	0.13	+1.7
1,648,091	+		DZA65_RS07895	0.54	-0.6
1,648,223	+		DZA65_RS07895	0.70	-0.3
1,648,223	+		DZA65_RS07895	0.70	-1.3
1,648,223	+		DZA65_RS07895	0.70	+0.1
1,648,223	+		DZA65_RS07895	0.70	-0.7
1,648,224	-		DZA65_RS07895	0.70	+0.9
1,648,224	-		DZA65_RS07895	0.70	-0.5
1,648,224	-		DZA65_RS07895	0.70	-1.1
1,648,224	-		DZA65_RS07895	0.70	-0.5
1,648,224	-		DZA65_RS07895	0.70	-0.5
1,648,224	-		DZA65_RS07895	0.70	-1.2
1,648,398	+				+1.8
1,648,399	-				+1.0
1,648,499	+				-1.1
1,648,499	+				-0.1
1,648,499	+				+2.0
1,648,499	+				-0.3
1,648,499	+				-0.6
1,648,499	+				+0.3
1,648,499	+				+0.1
1,648,500	-				+1.8
1,648,500	-				-1.5
1,648,500	-				-1.1
1,648,535	+				+0.1
1,648,535	+				+0.2
1,648,535	+				-1.7
1,648,536	-				-1.3
1,648,595	+				+2.0
1,648,596	-		DZA65_RS07900	0.10	-0.8
1,648,598	-		DZA65_RS07900	0.10	+0.6
1,648,639	-		DZA65_RS07900	0.14	-0.5