Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07740

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,609,121	+				-1.2
1,609,168	+				-0.2
1,609,168	+				-1.6
1,609,168	+				-0.2
1,609,168	+				+0.4
1,609,168	+				-0.1
1,609,169	-				-0.1
1,609,169	-				-0.2
1,609,205	+				+1.3
1,609,205	+				+1.3
1,609,206	-				+0.5
1,609,206	-				-0.8
1,609,206	-				+0.2
1,609,206	-				-0.2
1,609,223	+				-1.3
1,609,223	+				+0.5
1,609,223	+				-1.8
1,609,223	+				+0.5
1,609,223	+				+0.0
1,609,224	-				+1.9
1,609,224	-				+0.2
1,609,224	-				-0.1
1,609,268	+				-0.6
1,609,269	-				-0.2
1,609,296	+				+0.5
1,609,457	+				+0.4
1,609,457	+				-0.1
1,609,458	-				+0.2
1,609,542	+				-0.5
1,609,542	+				+0.9
1,609,543	-				-2.9
1,609,889	-		DZA65_RS07735	0.77	-0.5
1,609,889	-		DZA65_RS07735	0.77	-1.8
1,610,017	+				-2.6
1,610,017	+				+0.1
1,610,017	+				+1.8
1,610,018	-				+0.2
1,610,018	-				-2.3
1,610,018	-				+0.1
1,610,042	-				-0.1
1,610,067	+				-0.8
1,610,067	+				-0.3
1,610,067	+				+0.2
1,610,067	+				+0.5
1,610,067	+				-0.5
1,610,068	-				+0.4
1,610,068	-				+0.5
1,610,068	-				+0.9
1,610,068	-				+0.3
1,610,068	-				+0.2
1,610,068	-				+0.3
1,610,068	-				+1.9
1,610,068	-				-0.8
1,610,068	-				-0.5
1,610,068	-				-0.7
1,610,068	-				+1.5
1,610,068	-				-0.5
1,610,126	-				-0.1
1,610,166	+				+0.5
1,610,178	+				+0.3
1,610,178	+				-0.3
1,610,194	+				+0.3
1,610,202	+				+1.4
1,610,202	+				+0.9
1,610,203	-				+0.1
1,610,244	+		DZA65_RS07740	0.10	+0.4
1,610,254	+		DZA65_RS07740	0.11	+0.3
1,610,255	-		DZA65_RS07740	0.11	-1.3
1,610,263	-		DZA65_RS07740	0.12	-0.5
1,610,263	-		DZA65_RS07740	0.12	+0.7
1,610,263	-		DZA65_RS07740	0.12	-0.6
1,610,400	+		DZA65_RS07740	0.22	+0.1
1,610,400	+		DZA65_RS07740	0.22	+1.1
1,610,401	-		DZA65_RS07740	0.22	-1.3
1,610,449	+		DZA65_RS07740	0.26	+1.5
1,610,449	+		DZA65_RS07740	0.26	+1.6
1,610,450	-		DZA65_RS07740	0.26	-0.1
1,610,451	+		DZA65_RS07740	0.26	+0.0
1,610,452	-		DZA65_RS07740	0.26	-0.3
1,610,452	-		DZA65_RS07740	0.26	-0.7
1,610,458	+		DZA65_RS07740	0.27	-0.7
1,610,459	-		DZA65_RS07740	0.27	+1.8
1,610,474	+		DZA65_RS07740	0.28	-0.5
1,610,475	-		DZA65_RS07740	0.28	-0.1
1,610,475	-		DZA65_RS07740	0.28	-0.5
1,610,505	-		DZA65_RS07740	0.30	-2.3
1,610,505	-		DZA65_RS07740	0.30	+0.5
1,610,505	-		DZA65_RS07740	0.30	-1.2
1,610,518	+		DZA65_RS07740	0.31	-0.2
1,610,549	-		DZA65_RS07740	0.34	-0.2
1,610,742	+		DZA65_RS07740	0.49	-2.1
1,610,742	+		DZA65_RS07740	0.49	+0.5
1,610,742	+				+0.5
1,610,742	+		DZA65_RS07740	0.49	+1.5
1,610,743	-		DZA65_RS07740	0.49	+0.8
1,610,743	-		DZA65_RS07740	0.49	+0.0
1,610,743	-		DZA65_RS07740	0.49	+0.3
1,610,743	-		DZA65_RS07740	0.49	-0.1
1,610,743	-		DZA65_RS07740	0.49	+0.6
1,610,756	-		DZA65_RS07740	0.50	-0.5
1,610,855	+		DZA65_RS07740	0.58	-0.7
1,610,856	-		DZA65_RS07740	0.58	+2.4
1,610,856	-		DZA65_RS07740	0.58	+0.3
1,610,877	+		DZA65_RS07740	0.59	+1.1
1,611,095	+		DZA65_RS07740	0.76	-0.1
1,611,095	+		DZA65_RS07740	0.76	-0.2
1,611,096	-		DZA65_RS07740	0.76	-1.1
1,611,096	-		DZA65_RS07740	0.76	+0.9
1,611,096	-		DZA65_RS07740	0.76	-0.2
1,611,163	+		DZA65_RS07740	0.82	+0.4
1,611,164	-		DZA65_RS07740	0.82	+0.7
1,611,164	-		DZA65_RS07740	0.82	-0.6
1,611,221	+		DZA65_RS07740	0.86	+0.4
1,611,221	+		DZA65_RS07740	0.86	+1.8
1,611,221	+		DZA65_RS07740	0.86	+0.8
1,611,221	+		DZA65_RS07740	0.86	+1.4
1,611,221	+		DZA65_RS07740	0.86	+1.4
1,611,221	+		DZA65_RS07740	0.86	-0.6
1,611,221	+		DZA65_RS07740	0.86	+0.3
1,611,222	-		DZA65_RS07740	0.86	-0.2
1,611,231	+		DZA65_RS07740	0.87	+1.3
1,611,231	+		DZA65_RS07740	0.87	-0.9
1,611,235	+		DZA65_RS07740	0.87	+0.4
1,611,235	+		DZA65_RS07740	0.87	+0.4
1,611,240	-		DZA65_RS07740	0.88	-1.1
1,611,269	-				+1.5
1,611,269	-				-0.4
1,611,274	-				+0.8
1,611,274	-				+0.5
1,611,274	-				-0.3
1,611,318	+				+2.6
1,611,318	+				+0.4
1,611,318	+				-0.8
1,611,365	+				+1.4
1,611,366	-				-0.1
1,611,366	-				-0.5
1,611,389	-				-2.1
1,611,507	+				-0.5
1,611,626	+		DZA65_RS07745	0.88	-1.9
1,611,687	+				-0.1
1,611,687	+				-0.7
1,611,727	+				+0.1
1,611,727	+				-0.1
1,611,728	-				+0.5
1,611,770	+				-0.2
1,611,770	+				-0.5
1,611,771	-				+0.3
1,611,771	-				-0.1
1,611,771	-				+1.0
1,611,771	-				-0.8
1,611,771	-				+0.8
1,611,994	+				+0.7
1,611,994	+				+0.7
1,611,994	+				-0.4
1,611,994	+				+0.0
1,611,994	+				+0.5
1,611,994	+				+0.8
1,611,994	+				-0.8
1,611,995	-				+0.0
1,611,995	-				-0.3
1,611,995	-				+0.8
1,611,995	-				+1.2
1,611,995	-				-0.1
1,612,021	-				-1.3
1,612,220	+		DZA65_RS07750	0.12	+1.2
1,612,220	+		DZA65_RS07750	0.12	+0.3
1,612,220	+		DZA65_RS07750	0.12	+1.6
1,612,221	-		DZA65_RS07750	0.12	+0.9
1,612,221	-		DZA65_RS07750	0.12	+0.5
1,612,295	+		DZA65_RS07750	0.15	-0.5
1,612,295	+		DZA65_RS07750	0.15	+0.5
1,612,295	+		DZA65_RS07750	0.15	-1.1
1,612,295	+		DZA65_RS07750	0.15	-1.1
1,612,296	-		DZA65_RS07750	0.15	+0.7
1,612,296	-		DZA65_RS07750	0.15	+0.1
1,612,296	-		DZA65_RS07750	0.15	-1.1
1,612,296	-		DZA65_RS07750	0.15	-0.2
1,612,301	+		DZA65_RS07750	0.15	+0.9
1,612,301	+		DZA65_RS07750	0.15	-0.2
1,612,301	+		DZA65_RS07750	0.15	-1.8
1,612,301	+		DZA65_RS07750	0.15	+0.5
1,612,301	+		DZA65_RS07750	0.15	+0.5
1,612,302	-		DZA65_RS07750	0.15	-0.2
1,612,302	-		DZA65_RS07750	0.15	+0.5
1,612,302	-				+0.5
1,612,333	+		DZA65_RS07750	0.16	-1.2
1,612,345	+		DZA65_RS07750	0.16	+0.8
1,612,346	-		DZA65_RS07750	0.16	+0.9