Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07345

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,529,417	+		DZA65_RS07335	0.47	+0.1
1,529,454	+		DZA65_RS07335	0.50	+0.0
1,529,575	+		DZA65_RS07335	0.63	+1.1
1,529,576	-		DZA65_RS07335	0.63	-0.4
1,529,600	+		DZA65_RS07335	0.65	-0.3
1,529,644	+		DZA65_RS07335	0.70	-0.1
1,529,644	+		DZA65_RS07335	0.70	+0.6
1,529,644	+		DZA65_RS07335	0.70	+0.6
1,529,645	-		DZA65_RS07335	0.70	+0.2
1,529,645	-		DZA65_RS07335	0.70	-0.3
1,529,690	+		DZA65_RS07335	0.75	+0.5
1,529,691	-		DZA65_RS07335	0.75	+1.0
1,529,753	+		DZA65_RS07335	0.81	-1.0
1,529,753	+		DZA65_RS07335	0.81	+2.1
1,529,754	-		DZA65_RS07335	0.81	-1.8
1,529,754	-		DZA65_RS07335	0.81	-0.9
1,529,756	-		DZA65_RS07335	0.81	-0.4
1,529,756	-		DZA65_RS07335	0.81	-1.2
1,529,756	-		DZA65_RS07335	0.81	-1.8
1,529,756	-		DZA65_RS07335	0.81	+0.6
1,529,773	+		DZA65_RS07335	0.83	-2.0
1,529,773	+		DZA65_RS07335	0.83	+0.6
1,529,807	+		DZA65_RS07335	0.87	-0.6
1,529,858	+				+1.0
1,529,858	+				+0.6
1,529,858	+				-0.3
1,529,858	+				+0.2
1,529,858	+				+1.6
1,529,859	-				+0.6
1,529,859	-				+0.2
1,529,859	-				-1.2
1,529,859	-				-0.6
1,529,859	-				-1.0
1,529,859	-				+0.0
1,529,859	-				+0.7
1,529,879	-				-0.0
1,529,879	-				-1.6
1,529,879	-				+1.0
1,529,879	-				-1.6
1,529,880	+				-2.2
1,529,894	+				+1.0
1,529,894	+				-1.0
1,529,934	+				+0.3
1,529,934	+				+0.5
1,529,949	+				-0.4
1,529,949	+				-0.2
1,529,950	-				+0.3
1,529,956	+				-0.4
1,529,956	+				+0.3
1,529,957	-				-0.7
1,529,964	+				+1.1
1,529,964	+				+1.8
1,529,964	+				+0.2
1,530,044	+		DZA65_RS07340	0.20	-2.2
1,530,045	-		DZA65_RS07340	0.21	+0.4
1,530,264	+		DZA65_RS07340	0.86	+0.2
1,530,264	+		DZA65_RS07340	0.86	-0.0
1,530,289	+				+0.6
1,530,290	-				+1.7
1,530,321	+				+0.3
1,530,321	+				-1.1
1,530,321	+				+1.4
1,530,322	-				+0.3
1,530,322	-				+0.4
1,530,341	+				-2.8
1,530,364	+				-0.8
1,530,364	+				-0.1
1,530,364	+				+0.4
1,530,364	+				-0.9
1,530,364	+				+1.9
1,530,364	+				-0.2
1,530,364	+				+0.2
1,530,364	+				+0.1
1,530,365	-				+0.8
1,530,365	-				-1.8
1,530,365	-				+0.5
1,530,365	-				-2.6
1,530,365	-				+0.1
1,530,365	-				-0.2
1,530,434	-		DZA65_RS07345	0.14	+2.7
1,530,434	-		DZA65_RS07345	0.14	-0.4
1,530,434	-		DZA65_RS07345	0.14	+0.3
1,530,479	+		DZA65_RS07345	0.22	-1.0
1,530,480	-		DZA65_RS07345	0.22	-0.4
1,530,480	-		DZA65_RS07345	0.22	-0.8
1,530,480	-		DZA65_RS07345	0.22	+0.6
1,530,510	-		DZA65_RS07345	0.27	-0.6
1,530,510	-		DZA65_RS07345	0.27	+0.3
1,530,572	+		DZA65_RS07345	0.38	-0.2
1,530,572	+		DZA65_RS07345	0.38	+0.3
1,530,624	+		DZA65_RS07345	0.47	+0.1
1,530,624	+		DZA65_RS07345	0.47	+0.3
1,530,624	+		DZA65_RS07345	0.47	+0.8
1,530,625	-		DZA65_RS07345	0.47	+0.6
1,530,635	+		DZA65_RS07345	0.49	-0.0
1,530,635	+		DZA65_RS07345	0.49	+0.1
1,530,635	+		DZA65_RS07345	0.49	+0.3
1,530,653	+		DZA65_RS07345	0.52	-2.8
1,530,654	-		DZA65_RS07345	0.52	+1.6
1,530,654	-		DZA65_RS07345	0.52	+0.8
1,530,654	-		DZA65_RS07345	0.52	+0.3
1,530,684	+		DZA65_RS07345	0.57	+0.7
1,530,684	+		DZA65_RS07345	0.57	-0.7
1,530,684	+		DZA65_RS07345	0.57	-0.0
1,530,684	+		DZA65_RS07345	0.57	+1.0
1,530,684	+		DZA65_RS07345	0.57	+1.2
1,530,685	-		DZA65_RS07345	0.58	-3.2
1,530,685	-		DZA65_RS07345	0.58	+0.2
1,530,686	+		DZA65_RS07345	0.58	-0.1
1,530,686	+		DZA65_RS07345	0.58	-1.2
1,530,686	+		DZA65_RS07345	0.58	+1.0
1,530,686	+		DZA65_RS07345	0.58	-0.9
1,530,686	+		DZA65_RS07345	0.58	+0.1
1,530,686	+				+1.6
1,530,687	-		DZA65_RS07345	0.58	+0.2
1,530,687	-		DZA65_RS07345	0.58	-2.6
1,530,714	-		DZA65_RS07345	0.63	+0.1
1,530,741	+		DZA65_RS07345	0.67	-0.2
1,530,822	+		DZA65_RS07345	0.82	+0.1
1,530,822	+		DZA65_RS07345	0.82	+0.9
1,530,822	+		DZA65_RS07345	0.82	-0.7
1,530,823	-		DZA65_RS07345	0.82	-1.0
1,530,823	-		DZA65_RS07345	0.82	+0.6
1,530,823	-		DZA65_RS07345	0.82	+0.7
1,530,836	-		DZA65_RS07345	0.84	+0.6
1,530,913	+				+0.1
1,530,914	-				-0.2
1,530,939	+				-0.4
1,531,022	+				-1.0
1,531,022	+				+0.0
1,531,023	-				+0.7
1,531,023	-				+1.1
1,531,023	-				-2.6
1,531,097	+				+1.3
1,531,112	+				-0.2
1,531,112	+				-0.4
1,531,112	+				-1.0
1,531,113	-				-2.0
1,531,113	-				+0.7
1,531,346	-		DZA65_RS07350	0.25	-0.3
1,531,346	-		DZA65_RS07350	0.25	-1.2
1,531,346	-		DZA65_RS07350	0.25	-1.6
1,531,502	+		DZA65_RS07350	0.39	-2.1
1,531,524	-		DZA65_RS07350	0.41	+1.2
1,531,619	-		DZA65_RS07350	0.50	-0.2
1,531,649	-		DZA65_RS07350	0.53	+0.0
1,531,663	+		DZA65_RS07350	0.54	+0.8
1,531,664	-		DZA65_RS07350	0.54	+1.3
1,531,789	-		DZA65_RS07350	0.65	+1.2
1,531,830	+		DZA65_RS07350	0.69	+0.6
1,531,831	-		DZA65_RS07350	0.69	+0.4
1,531,883	+		DZA65_RS07350	0.74	-1.2
1,531,883	+		DZA65_RS07350	0.74	+1.5
1,531,883	+		DZA65_RS07350	0.74	-0.0
1,531,883	+				+0.6
1,531,883	+		DZA65_RS07350	0.74	+0.8
1,531,883	+		DZA65_RS07350	0.74	-1.0
1,531,883	+		DZA65_RS07350	0.74	-1.4
1,531,884	-		DZA65_RS07350	0.74	+0.3
1,531,921	+		DZA65_RS07350	0.77	+0.8
1,531,921	+		DZA65_RS07350	0.77	+0.6
1,531,921	+		DZA65_RS07350	0.77	-0.3
1,531,921	+		DZA65_RS07350	0.77	-0.8
1,531,921	+		DZA65_RS07350	0.77	-0.6
1,531,921	+		DZA65_RS07350	0.77	+0.0
1,531,922	-		DZA65_RS07350	0.77	-0.6