Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02780 and DZA65_RS02785 are separated by 59 nucleotides DZA65_RS02785 and DZA65_RS02790 are separated by 138 nucleotides
DZA65_RS02780: DZA65_RS02780 - IS630 family transposase, at 599,083 to 600,120
_RS02780
DZA65_RS02785: DZA65_RS02785 - DUF87 domain-containing protein, at 600,180 to 601,541
_RS02785
DZA65_RS02790: DZA65_RS02790 - DUF4868 domain-containing protein, at 601,680 to 602,630
_RS02790
Position (kb) 600
601
602 Strain fitness (log2 ratio) -2
-1
0
1
2 at 600.201 kb on + strand at 600.217 kb on + strand at 600.252 kb on + strand at 600.253 kb on - strand at 600.253 kb on - strand at 600.253 kb on - strand at 600.267 kb on - strand at 600.279 kb on + strand at 600.329 kb on + strand, within DZA65_RS02785 at 600.329 kb on + strand, within DZA65_RS02785 at 600.366 kb on - strand, within DZA65_RS02785 at 600.380 kb on + strand, within DZA65_RS02785 at 600.460 kb on - strand, within DZA65_RS02785 at 600.460 kb on - strand, within DZA65_RS02785 at 600.512 kb on + strand, within DZA65_RS02785 at 600.516 kb on - strand, within DZA65_RS02785 at 600.543 kb on + strand, within DZA65_RS02785 at 600.544 kb on - strand, within DZA65_RS02785 at 600.544 kb on - strand, within DZA65_RS02785 at 600.791 kb on + strand, within DZA65_RS02785 at 600.830 kb on + strand at 600.835 kb on + strand, within DZA65_RS02785 at 600.836 kb on - strand, within DZA65_RS02785 at 600.912 kb on - strand, within DZA65_RS02785 at 600.930 kb on - strand, within DZA65_RS02785 at 600.961 kb on + strand, within DZA65_RS02785 at 600.962 kb on - strand, within DZA65_RS02785 at 601.102 kb on - strand, within DZA65_RS02785 at 601.102 kb on - strand, within DZA65_RS02785 at 601.166 kb on - strand, within DZA65_RS02785 at 601.166 kb on - strand, within DZA65_RS02785 at 601.170 kb on - strand, within DZA65_RS02785 at 601.244 kb on - strand, within DZA65_RS02785 at 601.352 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.375 kb on + strand, within DZA65_RS02785 at 601.376 kb on - strand, within DZA65_RS02785 at 601.376 kb on - strand, within DZA65_RS02785 at 601.683 kb on + strand at 602.002 kb on - strand, within DZA65_RS02790 at 602.092 kb on + strand, within DZA65_RS02790 at 602.092 kb on + strand, within DZA65_RS02790 at 602.109 kb on + strand, within DZA65_RS02790 at 602.110 kb on - strand, within DZA65_RS02790 at 602.217 kb on - strand, within DZA65_RS02790 at 602.297 kb on - strand, within DZA65_RS02790 at 602.370 kb on - strand, within DZA65_RS02790 at 602.462 kb on - strand, within DZA65_RS02790 at 602.513 kb on + strand, within DZA65_RS02790 at 602.515 kb on + strand, within DZA65_RS02790 at 602.516 kb on - strand, within DZA65_RS02790 at 602.516 kb on - strand, within DZA65_RS02790
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 600,201 + -0.1 600,217 + +0.1 600,252 + +0.9 600,253 - -0.7 600,253 - -2.1 600,253 - +1.9 600,267 - -1.4 600,279 + +0.1 600,329 + DZA65_RS02785 0.11 +0.5 600,329 + DZA65_RS02785 0.11 -0.5 600,366 - DZA65_RS02785 0.14 +1.9 600,380 + DZA65_RS02785 0.15 +1.3 600,460 - DZA65_RS02785 0.21 -1.0 600,460 - DZA65_RS02785 0.21 -0.3 600,512 + DZA65_RS02785 0.24 +0.5 600,516 - DZA65_RS02785 0.25 +0.5 600,543 + DZA65_RS02785 0.27 +0.9 600,544 - DZA65_RS02785 0.27 +0.1 600,544 - DZA65_RS02785 0.27 -0.3 600,791 + DZA65_RS02785 0.45 +0.8 600,830 + -0.1 600,835 + DZA65_RS02785 0.48 +0.6 600,836 - DZA65_RS02785 0.48 +0.3 600,912 - DZA65_RS02785 0.54 -1.4 600,930 - DZA65_RS02785 0.55 -0.1 600,961 + DZA65_RS02785 0.57 +0.7 600,962 - DZA65_RS02785 0.57 -0.5 601,102 - DZA65_RS02785 0.68 +0.9 601,102 - DZA65_RS02785 0.68 -0.2 601,166 - DZA65_RS02785 0.72 +0.4 601,166 - DZA65_RS02785 0.72 +2.0 601,170 - DZA65_RS02785 0.73 -0.0 601,244 - DZA65_RS02785 0.78 -0.4 601,352 + DZA65_RS02785 0.86 +0.2 601,375 + DZA65_RS02785 0.88 +0.8 601,375 + DZA65_RS02785 0.88 -0.0 601,375 + DZA65_RS02785 0.88 +0.5 601,376 - DZA65_RS02785 0.88 -0.1 601,376 - DZA65_RS02785 0.88 +0.8 601,683 + -0.1 602,002 - DZA65_RS02790 0.34 -2.6 602,092 + DZA65_RS02790 0.43 -1.7 602,092 + DZA65_RS02790 0.43 -0.7 602,109 + DZA65_RS02790 0.45 -0.4 602,110 - DZA65_RS02790 0.45 +0.0 602,217 - DZA65_RS02790 0.56 -0.3 602,297 - DZA65_RS02790 0.65 -0.7 602,370 - DZA65_RS02790 0.73 +0.2 602,462 - DZA65_RS02790 0.82 +0.6 602,513 + DZA65_RS02790 0.88 -0.4 602,515 + DZA65_RS02790 0.88 -1.4 602,516 - DZA65_RS02790 0.88 -2.0 602,516 - DZA65_RS02790 0.88 +0.3
Or see this region's nucleotide sequence