Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS21155

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,813,914	+				+0.1
4,813,958	+		DDA3937_RS21150	0.71	+0.1
4,814,058	+		DDA3937_RS21150	0.83	+0.4
4,814,059	-		DDA3937_RS21150	0.83	+1.1
4,814,059	-		DDA3937_RS21150	0.83	-0.9
4,814,105	+		DDA3937_RS21150	0.88	+0.2
4,814,182	-				-1.7
4,814,196	+				-0.0
4,814,277	+				-0.8
4,814,489	+				-0.6
4,814,489	+				-1.9
4,814,650	-				-0.0
4,814,660	+				-1.1
4,814,853	-				+0.6
4,814,856	-				-0.5
4,814,957	+				+0.1
4,814,964	+				-0.2
4,815,075	-		DDA3937_RS21155	0.17	-1.0
4,815,184	+		DDA3937_RS21155	0.25	+1.4
4,815,184	+		DDA3937_RS21155	0.25	+0.9
4,815,189	+				+1.1
4,815,189	+		DDA3937_RS21155	0.25	-0.7
4,815,190	-		DDA3937_RS21155	0.26	-0.7
4,815,190	-		DDA3937_RS21155	0.26	+0.6
4,815,190	-		DDA3937_RS21155	0.26	-0.3
4,815,190	-		DDA3937_RS21155	0.26	+0.4
4,815,191	+		DDA3937_RS21155	0.26	-1.5
4,815,192	-		DDA3937_RS21155	0.26	-0.5
4,815,192	-		DDA3937_RS21155	0.26	+0.5
4,815,215	+		DDA3937_RS21155	0.27	+1.0
4,815,215	+		DDA3937_RS21155	0.27	-2.8
4,815,216	-		DDA3937_RS21155	0.28	-0.8
4,815,243	+		DDA3937_RS21155	0.30	-0.1
4,815,244	-		DDA3937_RS21155	0.30	-2.6
4,815,258	-		DDA3937_RS21155	0.31	+1.1
4,815,301	+		DDA3937_RS21155	0.34	-2.2
4,815,301	+		DDA3937_RS21155	0.34	-0.1
4,815,301	+		DDA3937_RS21155	0.34	+0.1
4,815,301	+		DDA3937_RS21155	0.34	+1.1
4,815,302	-		DDA3937_RS21155	0.34	-0.5
4,815,302	-		DDA3937_RS21155	0.34	-1.0
4,815,302	-		DDA3937_RS21155	0.34	-0.7
4,815,302	-		DDA3937_RS21155	0.34	-0.9
4,815,308	+		DDA3937_RS21155	0.35	-2.0
4,815,309	-		DDA3937_RS21155	0.35	+0.1
4,815,359	+		DDA3937_RS21155	0.38	-1.0
4,815,411	-		DDA3937_RS21155	0.42	+0.1
4,815,441	-		DDA3937_RS21155	0.45	-0.3
4,815,512	+		DDA3937_RS21155	0.50	+0.0
4,815,543	+		DDA3937_RS21155	0.53	-0.6
4,815,543	+		DDA3937_RS21155	0.53	-0.7
4,815,566	+		DDA3937_RS21155	0.54	+0.1
4,815,586	+		DDA3937_RS21155	0.56	+1.1
4,815,587	-		DDA3937_RS21155	0.56	-0.0
4,815,639	-		DDA3937_RS21155	0.60	+0.8
4,815,639	-		DDA3937_RS21155	0.60	+1.7
4,815,669	-		DDA3937_RS21155	0.62	-0.8
4,815,752	+		DDA3937_RS21155	0.69	+0.9
4,815,786	+		DDA3937_RS21155	0.71	-1.1
4,815,866	+		DDA3937_RS21155	0.77	-0.8
4,815,866	+		DDA3937_RS21155	0.77	-0.7
4,815,867	-		DDA3937_RS21155	0.77	-0.7
4,815,870	-		DDA3937_RS21155	0.78	-1.3
4,815,898	-		DDA3937_RS21155	0.80	+0.6
4,815,924	+		DDA3937_RS21155	0.82	+1.5
4,815,927	+		DDA3937_RS21155	0.82	-0.0
4,815,927	+		DDA3937_RS21155	0.82	-0.9
4,815,931	-		DDA3937_RS21155	0.82	-0.6
4,816,024	+		DDA3937_RS21155	0.89	-1.3
4,816,025	-		DDA3937_RS21155	0.89	-0.0
4,816,148	-				-1.2
4,816,150	+				-2.2
4,816,151	-				+0.5
4,816,162	-				+0.7
4,816,162	-				-0.2
4,816,194	+				-1.2
4,816,221	-				-0.1
4,816,221	-				+0.3
4,816,221	-				-0.9
4,816,229	+				-0.7
4,816,230	-				+0.6
4,816,230	-				-0.5
4,816,377	-				-0.2
4,816,482	-		DDA3937_RS21160	0.15	-0.3
4,816,482	-		DDA3937_RS21160	0.15	-0.4
4,816,482	-		DDA3937_RS21160	0.15	+0.4
4,816,482	-		DDA3937_RS21160	0.15	+0.9
4,816,482	-		DDA3937_RS21160	0.15	+1.5
4,816,598	-		DDA3937_RS21160	0.22	-0.1
4,816,598	-		DDA3937_RS21160	0.22	-0.2
4,816,652	+		DDA3937_RS21160	0.25	+1.1
4,816,652	+		DDA3937_RS21160	0.25	+0.1
4,816,652	+		DDA3937_RS21160	0.25	-1.2
4,816,685	+		DDA3937_RS21160	0.27	-1.9
4,816,746	+		DDA3937_RS21160	0.30	-0.2
4,816,747	-		DDA3937_RS21160	0.30	-0.6
4,816,747	-		DDA3937_RS21160	0.30	-1.6
4,816,747	-		DDA3937_RS21160	0.30	-0.5
4,816,802	+		DDA3937_RS21160	0.33	-0.9
4,816,803	-		DDA3937_RS21160	0.33	-0.1
4,816,803	-		DDA3937_RS21160	0.33	+0.1
4,816,822	+		DDA3937_RS21160	0.34	+1.8
4,816,822	+		DDA3937_RS21160	0.34	-1.6
4,816,823	-		DDA3937_RS21160	0.34	-1.0
4,816,960	+		DDA3937_RS21160	0.42	-0.4
4,816,960	+		DDA3937_RS21160	0.42	-1.3
4,816,960	+		DDA3937_RS21160	0.42	-0.7
4,816,960	+				+3.1
4,816,960	+		DDA3937_RS21160	0.42	-0.6
4,816,961	-		DDA3937_RS21160	0.42	+2.8
4,816,961	-		DDA3937_RS21160	0.42	-1.1
4,816,961	-		DDA3937_RS21160	0.42	-0.1
4,816,983	+		DDA3937_RS21160	0.44	-0.6
4,816,984	-		DDA3937_RS21160	0.44	-0.0
4,816,987	+		DDA3937_RS21160	0.44	-0.5
4,816,987	+		DDA3937_RS21160	0.44	+0.1
4,816,988	-		DDA3937_RS21160	0.44	-0.1
4,816,988	-		DDA3937_RS21160	0.44	+0.1
4,817,003	+		DDA3937_RS21160	0.45	-1.9
4,817,004	-		DDA3937_RS21160	0.45	+0.7
4,817,021	+		DDA3937_RS21160	0.46	-1.4
4,817,055	+		DDA3937_RS21160	0.48	-0.3
4,817,055	+		DDA3937_RS21160	0.48	-1.2
4,817,055	+		DDA3937_RS21160	0.48	-0.2
4,817,055	+		DDA3937_RS21160	0.48	-2.7
4,817,055	+		DDA3937_RS21160	0.48	+0.9
4,817,055	+		DDA3937_RS21160	0.48	-0.5
4,817,055	+		DDA3937_RS21160	0.48	-0.8
4,817,055	+		DDA3937_RS21160	0.48	-0.7
4,817,055	+		DDA3937_RS21160	0.48	+0.4
4,817,055	+		DDA3937_RS21160	0.48	-2.5
4,817,055	+		DDA3937_RS21160	0.48	-1.9
4,817,056	-		DDA3937_RS21160	0.48	-1.1
4,817,056	-		DDA3937_RS21160	0.48	+0.3
4,817,056	-		DDA3937_RS21160	0.48	-1.7
4,817,056	-		DDA3937_RS21160	0.48	+1.9
4,817,056	-		DDA3937_RS21160	0.48	-1.2
4,817,056	-		DDA3937_RS21160	0.48	-0.4
4,817,059	+		DDA3937_RS21160	0.48	-1.0
4,817,059	+		DDA3937_RS21160	0.48	-0.9
4,817,059	+		DDA3937_RS21160	0.48	-0.7
4,817,059	+		DDA3937_RS21160	0.48	+0.1
4,817,060	-		DDA3937_RS21160	0.48	+0.1
4,817,060	-		DDA3937_RS21160	0.48	-2.3
4,817,060	-		DDA3937_RS21160	0.48	-1.8
4,817,060	-		DDA3937_RS21160	0.48	-1.3
4,817,060	-		DDA3937_RS21160	0.48	-0.7
4,817,124	-		DDA3937_RS21160	0.52	+1.4