Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS20845

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,736,021	+				+1.2
4,736,021	+				+0.3
4,736,021	+				+0.7
4,736,021	+				-0.9
4,736,021	+				-0.3
4,736,021	+				+0.7
4,736,022	-				-0.1
4,736,065	-		DDA3937_RS20840	0.11	-0.6
4,736,099	+		DDA3937_RS20840	0.14	+0.1
4,736,104	-		DDA3937_RS20840	0.15	+2.0
4,736,134	+		DDA3937_RS20840	0.17	-0.9
4,736,134	+				+0.1
4,736,134	+		DDA3937_RS20840	0.17	-0.1
4,736,134	+		DDA3937_RS20840	0.17	-1.0
4,736,135	-		DDA3937_RS20840	0.18	-0.1
4,736,135	-		DDA3937_RS20840	0.18	-0.8
4,736,135	-		DDA3937_RS20840	0.18	+0.0
4,736,293	+		DDA3937_RS20840	0.32	-0.6
4,736,293	+		DDA3937_RS20840	0.32	-0.2
4,736,294	-		DDA3937_RS20840	0.32	+0.1
4,736,294	-		DDA3937_RS20840	0.32	+0.4
4,736,432	+		DDA3937_RS20840	0.45	-0.7
4,736,433	-		DDA3937_RS20840	0.45	+2.0
4,736,470	+		DDA3937_RS20840	0.48	+2.0
4,736,470	+		DDA3937_RS20840	0.48	+0.4
4,736,471	-		DDA3937_RS20840	0.48	-1.6
4,736,471	-		DDA3937_RS20840	0.48	+2.4
4,736,521	+		DDA3937_RS20840	0.53	+0.7
4,736,521	+		DDA3937_RS20840	0.53	-0.4
4,736,521	+		DDA3937_RS20840	0.53	-1.7
4,736,521	+				-0.5
4,736,521	+		DDA3937_RS20840	0.53	-0.3
4,736,522	-		DDA3937_RS20840	0.53	+0.3
4,736,522	-		DDA3937_RS20840	0.53	+1.1
4,736,624	+		DDA3937_RS20840	0.62	+0.5
4,736,624	+		DDA3937_RS20840	0.62	+0.7
4,736,624	+		DDA3937_RS20840	0.62	-0.5
4,736,624	+		DDA3937_RS20840	0.62	+2.7
4,736,625	-		DDA3937_RS20840	0.63	-0.2
4,736,625	-		DDA3937_RS20840	0.63	-0.1
4,736,707	+		DDA3937_RS20840	0.70	+0.3
4,736,707	+		DDA3937_RS20840	0.70	-2.0
4,736,707	+		DDA3937_RS20840	0.70	-0.9
4,736,707	+		DDA3937_RS20840	0.70	+0.2
4,736,707	+		DDA3937_RS20840	0.70	-0.9
4,736,707	+		DDA3937_RS20840	0.70	-1.2
4,736,707	+		DDA3937_RS20840	0.70	-1.7
4,736,708	-		DDA3937_RS20840	0.70	-1.2
4,736,708	-		DDA3937_RS20840	0.70	-1.8
4,736,708	-		DDA3937_RS20840	0.70	+0.6
4,736,708	-				+1.1
4,736,708	-		DDA3937_RS20840	0.70	+0.5
4,736,708	-		DDA3937_RS20840	0.70	+0.3
4,736,708	-		DDA3937_RS20840	0.70	+0.6
4,736,708	-		DDA3937_RS20840	0.70	-0.7
4,736,758	+		DDA3937_RS20840	0.75	-0.9
4,736,758	+				+1.5
4,736,758	+		DDA3937_RS20840	0.75	+0.2
4,736,780	-		DDA3937_RS20840	0.77	+0.1
4,736,780	-		DDA3937_RS20840	0.77	+1.3
4,736,786	+		DDA3937_RS20840	0.77	-0.8
4,736,787	-		DDA3937_RS20840	0.77	+1.3
4,736,788	+		DDA3937_RS20840	0.78	-0.5
4,736,789	-		DDA3937_RS20840	0.78	+1.2
4,736,789	-		DDA3937_RS20840	0.78	-0.7
4,736,789	-		DDA3937_RS20840	0.78	-0.2
4,736,789	-		DDA3937_RS20840	0.78	-0.2
4,736,789	-		DDA3937_RS20840	0.78	+0.5
4,736,812	-		DDA3937_RS20840	0.80	-0.2
4,736,896	+		DDA3937_RS20840	0.87	-0.9
4,736,896	+		DDA3937_RS20840	0.87	+0.4
4,736,897	-		DDA3937_RS20840	0.88	+2.5
4,736,897	-		DDA3937_RS20840	0.88	+0.2
4,736,897	-		DDA3937_RS20840	0.88	-1.2
4,736,924	+				+1.1
4,736,924	+				-0.1
4,736,925	-				+1.7
4,736,925	-				+1.3
4,736,971	+				+0.1
4,736,971	+				-0.1
4,736,971	+				-0.8
4,736,971	+				-1.9
4,736,971	+				+0.6
4,736,972	-				-0.5
4,736,972	-				+0.7
4,736,972	-				-0.5
4,736,972	-				-0.8
4,736,972	-				-0.2
4,736,978	-				-0.5
4,736,978	-				-0.3
4,736,978	-				-0.6
4,736,978	-				-0.5
4,737,015	+				-1.1
4,737,015	+				-0.7
4,737,015	+				+3.5
4,737,015	+				+0.0
4,737,015	+				-1.2
4,737,016	-				-0.9
4,737,016	-				+2.6
4,737,016	-				+0.0
4,737,016	-				-0.6
4,737,016	-				+1.7
4,737,016	-				+0.1
4,737,020	+				+0.3
4,737,021	-				-1.0
4,737,021	-				+0.2
4,737,022	+				+0.6
4,737,022	+				-1.7
4,737,022	+				+0.3
4,737,022	+				-0.0
4,737,023	-				-0.9
4,737,023	-				+0.9
4,737,023	-				+0.1
4,737,023	-				-0.5
4,737,023	-				-0.6
4,737,023	-				+1.7
4,737,090	-				-0.6
4,737,143	+				-1.1
4,737,143	+				-1.5
4,737,264	+		DDA3937_RS20845	0.18	-1.2
4,737,349	-		DDA3937_RS20845	0.24	+0.3
4,737,367	+		DDA3937_RS20845	0.26	+1.0
4,737,367	+		DDA3937_RS20845	0.26	+0.1
4,737,368	-		DDA3937_RS20845	0.26	+0.9
4,737,368	-		DDA3937_RS20845	0.26	-1.5
4,737,368	-		DDA3937_RS20845	0.26	+0.8
4,737,368	-		DDA3937_RS20845	0.26	+0.1
4,737,368	-		DDA3937_RS20845	0.26	+0.3
4,737,389	+		DDA3937_RS20845	0.27	-2.2
4,737,389	+		DDA3937_RS20845	0.27	+0.9
4,737,511	-		DDA3937_RS20845	0.36	-1.3
4,737,532	+		DDA3937_RS20845	0.38	+0.7
4,737,533	-		DDA3937_RS20845	0.38	-2.6
4,737,533	-		DDA3937_RS20845	0.38	-0.9
4,737,765	+		DDA3937_RS20845	0.55	-0.2
4,737,765	+		DDA3937_RS20845	0.55	-1.7
4,737,766	-		DDA3937_RS20845	0.55	-2.7
4,737,766	-		DDA3937_RS20845	0.55	-2.0
4,737,766	-		DDA3937_RS20845	0.55	-1.2
4,737,818	+		DDA3937_RS20845	0.59	+0.5
4,737,818	+		DDA3937_RS20845	0.59	-1.5
4,737,818	+		DDA3937_RS20845	0.59	+0.8
4,737,819	-		DDA3937_RS20845	0.59	+3.0
4,737,819	-		DDA3937_RS20845	0.59	-0.8
4,737,845	+		DDA3937_RS20845	0.61	+0.6
4,737,845	+		DDA3937_RS20845	0.61	-1.1
4,737,845	+		DDA3937_RS20845	0.61	-0.1
4,737,845	+		DDA3937_RS20845	0.61	-0.3
4,737,845	+		DDA3937_RS20845	0.61	-0.3
4,737,846	-		DDA3937_RS20845	0.61	+3.6
4,737,846	-		DDA3937_RS20845	0.61	-2.0
4,737,944	+		DDA3937_RS20845	0.68	-0.8
4,738,077	+		DDA3937_RS20845	0.78	+0.5
4,738,077	+		DDA3937_RS20845	0.78	+0.1
4,738,077	+		DDA3937_RS20845	0.78	+0.9
4,738,077	+		DDA3937_RS20845	0.78	+0.3
4,738,077	+		DDA3937_RS20845	0.78	+0.8
4,738,077	+		DDA3937_RS20845	0.78	+1.3
4,738,077	+		DDA3937_RS20845	0.78	-0.9
4,738,077	+		DDA3937_RS20845	0.78	+0.3
4,738,078	-		DDA3937_RS20845	0.78	-1.2
4,738,078	-		DDA3937_RS20845	0.78	-2.0
4,738,078	-		DDA3937_RS20845	0.78	+0.3
4,738,078	-		DDA3937_RS20845	0.78	-0.4
4,738,078	-		DDA3937_RS20845	0.78	-0.7
4,738,078	-		DDA3937_RS20845	0.78	-1.5
4,738,078	-		DDA3937_RS20845	0.78	-1.9
4,738,078	-		DDA3937_RS20845	0.78	+1.5
4,738,078	-		DDA3937_RS20845	0.78	-1.0
4,738,078	-		DDA3937_RS20845	0.78	+1.1
4,738,078	-				+1.1
4,738,078	-		DDA3937_RS20845	0.78	-2.2
4,738,078	-		DDA3937_RS20845	0.78	-1.7
4,738,078	-		DDA3937_RS20845	0.78	+0.8
4,738,078	-		DDA3937_RS20845	0.78	-1.9
4,738,078	-		DDA3937_RS20845	0.78	-0.9
4,738,078	-		DDA3937_RS20845	0.78	-0.9
4,738,080	+		DDA3937_RS20845	0.78	+0.3
4,738,081	-		DDA3937_RS20845	0.78	-0.5
4,738,081	-		DDA3937_RS20845	0.78	-0.1
4,738,081	-		DDA3937_RS20845	0.78	+1.0
4,738,081	-		DDA3937_RS20845	0.78	+0.3
4,738,081	-		DDA3937_RS20845	0.78	-3.0
4,738,180	-		DDA3937_RS20845	0.86	+1.1
4,738,251	+				-1.1
4,738,300	+				-0.1
4,738,428	+				+0.1
4,738,429	-				-0.0
4,738,429	-				-1.2
4,738,437	+				-1.2
4,738,437	+				-2.2
4,738,437	+				-1.7
4,738,437	+				-0.6
4,738,438	-				+0.9
4,738,438	-				-0.6
4,738,455	+				-0.3
4,738,455	+				+0.1
4,738,455	+				-0.2
4,738,456	-				-0.7
4,738,456	-				+0.8
4,738,456	-				-0.7
4,738,471	+		DDA3937_RS20850	0.12	+1.3
4,738,523	-		DDA3937_RS20850	0.21	-0.0
4,738,539	+		DDA3937_RS20850	0.23	-1.0
4,738,539	+		DDA3937_RS20850	0.23	+0.1
4,738,587	+		DDA3937_RS20850	0.31	-0.9
4,738,587	+		DDA3937_RS20850	0.31	-0.0
4,738,587	+		DDA3937_RS20850	0.31	+0.1
4,738,587	+		DDA3937_RS20850	0.31	-1.7
4,738,588	-		DDA3937_RS20850	0.31	-0.7
4,738,588	-		DDA3937_RS20850	0.31	-0.1
4,738,588	-		DDA3937_RS20850	0.31	-2.2
4,738,588	-		DDA3937_RS20850	0.31	-0.7
4,738,588	-		DDA3937_RS20850	0.31	+2.9
4,738,715	+		DDA3937_RS20850	0.52	-0.5
4,738,715	+		DDA3937_RS20850	0.52	+0.6
4,738,716	-		DDA3937_RS20850	0.52	+0.1
4,738,716	-		DDA3937_RS20850	0.52	+1.7
4,738,717	+		DDA3937_RS20850	0.52	-0.9
4,738,718	-		DDA3937_RS20850	0.52	+0.2
4,738,783	+		DDA3937_RS20850	0.63	-0.9
4,738,783	+		DDA3937_RS20850	0.63	+0.3
4,738,783	+		DDA3937_RS20850	0.63	+0.9
4,738,784	-		DDA3937_RS20850	0.63	-1.3
4,738,887	+		DDA3937_RS20850	0.80	-0.1
4,738,905	+		DDA3937_RS20850	0.83	-0.7
4,738,905	+		DDA3937_RS20850	0.83	-1.9
4,738,905	+		DDA3937_RS20850	0.83	-1.2
4,738,906	-		DDA3937_RS20850	0.83	-0.0
4,739,045	+		DDA3937_RS20855	0.18	-2.4
4,739,046	-		DDA3937_RS20855	0.18	-1.8
4,739,117	+		DDA3937_RS20855	0.45	-1.7
4,739,117	+		DDA3937_RS20855	0.45	+0.7
4,739,118	-		DDA3937_RS20855	0.45	-1.7
4,739,250	+				+0.7
4,739,250	+				-0.9
4,739,279	+				+2.1
4,739,280	-				+0.5
4,739,280	-				-0.1
4,739,346	-				-0.2
4,739,367	+				-1.2
4,739,367	+				-0.7
4,739,368	-				-1.0