Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS20680 and DDA3937_RS20685 are separated by 318 nucleotides DDA3937_RS20685 and DDA3937_RS20690 are separated by 72 nucleotides DDA3937_RS20690 and DDA3937_RS20695 are separated by 48 nucleotides DDA3937_RS20695 and DDA3937_RS20700 are separated by 31 nucleotides
DDA3937_RS20680: DDA3937_RS20680 - hypothetical protein, at 4,702,125 to 4,702,868
_RS20680
DDA3937_RS20685: DDA3937_RS20685 - hypothetical protein, at 4,703,187 to 4,703,558
_RS20685
DDA3937_RS20690: DDA3937_RS20690 - hypothetical protein, at 4,703,631 to 4,704,560
_RS20690
DDA3937_RS20695: DDA3937_RS20695 - hypothetical protein, at 4,704,609 to 4,705,334
_RS20695
DDA3937_RS20700: DDA3937_RS20700 - hypothetical protein, at 4,705,366 to 4,705,854
_RS20700
Position (kb) 4703
4704
4705 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4702.732 kb on + strand, within DDA3937_RS20680 at 4702.796 kb on + strand at 4702.797 kb on - strand at 4702.932 kb on - strand at 4703.002 kb on + strand at 4703.033 kb on - strand at 4703.066 kb on + strand at 4703.068 kb on + strand at 4703.224 kb on + strand at 4703.535 kb on + strand at 4703.546 kb on + strand at 4703.653 kb on + strand at 4703.654 kb on - strand at 4703.838 kb on - strand, within DDA3937_RS20690 at 4703.866 kb on - strand, within DDA3937_RS20690 at 4703.874 kb on + strand, within DDA3937_RS20690 at 4703.923 kb on - strand, within DDA3937_RS20690 at 4704.004 kb on - strand, within DDA3937_RS20690 at 4704.005 kb on + strand, within DDA3937_RS20690 at 4704.314 kb on - strand, within DDA3937_RS20690 at 4704.531 kb on - strand at 4704.534 kb on - strand at 4704.590 kb on + strand at 4704.591 kb on - strand at 4704.646 kb on + strand at 4704.972 kb on - strand, within DDA3937_RS20695 at 4705.035 kb on - strand, within DDA3937_RS20695 at 4705.247 kb on - strand, within DDA3937_RS20695 at 4705.543 kb on + strand, within DDA3937_RS20700
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 4,702,732 + DDA3937_RS20680 0.82 -0.5 4,702,796 + -0.5 4,702,797 - -1.0 4,702,932 - -0.3 4,703,002 + -1.2 4,703,033 - -1.2 4,703,066 + -0.3 4,703,068 + -0.1 4,703,224 + +0.3 4,703,535 + +0.2 4,703,546 + -0.1 4,703,653 + +0.7 4,703,654 - +0.2 4,703,838 - DDA3937_RS20690 0.22 +3.4 4,703,866 - DDA3937_RS20690 0.25 -2.0 4,703,874 + DDA3937_RS20690 0.26 -0.2 4,703,923 - DDA3937_RS20690 0.31 +1.3 4,704,004 - DDA3937_RS20690 0.40 -1.2 4,704,005 + DDA3937_RS20690 0.40 +0.8 4,704,314 - DDA3937_RS20690 0.73 +0.6 4,704,531 - +0.5 4,704,534 - -2.0 4,704,590 + -2.3 4,704,591 - -0.1 4,704,646 + -1.2 4,704,972 - DDA3937_RS20695 0.50 -0.4 4,705,035 - DDA3937_RS20695 0.59 +0.6 4,705,247 - DDA3937_RS20695 0.88 -0.1 4,705,543 + DDA3937_RS20700 0.36 -0.5
Or see this region's nucleotide sequence