Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10860

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,448,749	-				+1.4
2,448,749	-				-2.6
2,448,790	+				+0.6
2,448,791	-				-0.0
2,448,791	-				+0.6
2,448,831	-				+0.3
2,448,836	+				+1.3
2,448,868	+				+0.2
2,448,876	-				-0.4
2,448,876	-				-0.6
2,448,881	+				-1.3
2,448,881	+				-0.5
2,448,882	-				+0.4
2,448,914	+				+1.0
2,448,923	-				+1.3
2,448,934	+				-0.7
2,448,941	+				+0.3
2,449,050	-				+0.9
2,449,132	-				-1.7
2,449,164	+				+0.6
2,449,166	+				+0.4
2,449,166	+				-0.5
2,449,166	+				-1.3
2,449,167	-				-1.1
2,449,167	-				-0.1
2,449,167	-				+0.9
2,449,167	-				+1.2
2,449,189	-				-1.3
2,449,189	-				+0.4
2,449,265	+				+1.0
2,449,265	+				+0.3
2,449,279	+				-0.7
2,449,280	-				-0.3
2,449,280	-				+0.2
2,449,280	-				-0.3
2,449,280	-				-1.9
2,449,280	-				-0.7
2,449,324	-		DDA3937_RS10855	0.11	-2.0
2,449,386	-		DDA3937_RS10855	0.25	+0.7
2,449,545	+		DDA3937_RS10855	0.59	-0.4
2,449,595	+				+0.3
2,449,596	-		DDA3937_RS10855	0.71	-1.9
2,449,879	+				+0.3
2,449,880	-				-0.2
2,449,896	+				-0.8
2,449,896	+				-0.2
2,449,897	-				+0.5
2,449,897	-				+0.9
2,449,897	-				-0.4
2,450,027	-		DDA3937_RS10860	0.16	-0.7
2,450,065	+		DDA3937_RS10860	0.18	-2.5
2,450,065	+		DDA3937_RS10860	0.18	-1.0
2,450,182	+		DDA3937_RS10860	0.25	-0.4
2,450,182	+		DDA3937_RS10860	0.25	-0.7
2,450,182	+		DDA3937_RS10860	0.25	-0.0
2,450,243	+		DDA3937_RS10860	0.28	+0.2
2,450,244	-				-1.7
2,450,257	+		DDA3937_RS10860	0.29	+2.2
2,450,258	-		DDA3937_RS10860	0.29	+0.4
2,450,284	+		DDA3937_RS10860	0.30	-0.5
2,450,284	+		DDA3937_RS10860	0.30	+1.9
2,450,284	+		DDA3937_RS10860	0.30	-0.1
2,450,284	+		DDA3937_RS10860	0.30	-0.4
2,450,284	+		DDA3937_RS10860	0.30	-3.0
2,450,284	+		DDA3937_RS10860	0.30	+3.6
2,450,284	+		DDA3937_RS10860	0.30	+1.0
2,450,284	+		DDA3937_RS10860	0.30	-0.2
2,450,284	+		DDA3937_RS10860	0.30	+0.9
2,450,285	-		DDA3937_RS10860	0.30	+0.3
2,450,285	-		DDA3937_RS10860	0.30	-0.7
2,450,285	-		DDA3937_RS10860	0.30	-2.3
2,450,285	-		DDA3937_RS10860	0.30	-0.6
2,450,285	-		DDA3937_RS10860	0.30	+0.6
2,450,455	+		DDA3937_RS10860	0.40	-1.2
2,450,511	+		DDA3937_RS10860	0.43	+0.3
2,450,511	+		DDA3937_RS10860	0.43	+1.0
2,450,512	-		DDA3937_RS10860	0.43	-0.1
2,450,512	-				+1.9
2,450,512	-		DDA3937_RS10860	0.43	-0.7
2,450,512	-		DDA3937_RS10860	0.43	-0.3
2,450,512	-		DDA3937_RS10860	0.43	-0.2
2,450,515	+		DDA3937_RS10860	0.43	-1.3
2,450,515	+		DDA3937_RS10860	0.43	-0.0
2,450,515	+		DDA3937_RS10860	0.43	+0.3
2,450,515	+		DDA3937_RS10860	0.43	-0.2
2,450,516	-		DDA3937_RS10860	0.43	+0.2
2,450,516	-		DDA3937_RS10860	0.43	+0.6
2,450,516	-		DDA3937_RS10860	0.43	-1.3
2,450,607	+		DDA3937_RS10860	0.48	+0.0
2,450,613	-		DDA3937_RS10860	0.48	-0.4
2,450,674	+				-0.7
2,450,674	+				+1.3
2,450,674	+		DDA3937_RS10860	0.52	-0.1
2,450,674	+		DDA3937_RS10860	0.52	-0.6
2,450,674	+		DDA3937_RS10860	0.52	+0.4
2,450,675	-		DDA3937_RS10860	0.52	+0.7
2,450,675	-		DDA3937_RS10860	0.52	+0.6
2,450,675	-		DDA3937_RS10860	0.52	-0.8
2,450,675	-		DDA3937_RS10860	0.52	-0.7
2,450,675	-		DDA3937_RS10860	0.52	+0.7
2,450,675	-		DDA3937_RS10860	0.52	-1.4
2,450,675	-		DDA3937_RS10860	0.52	+1.6
2,450,675	-		DDA3937_RS10860	0.52	-0.9
2,450,675	-		DDA3937_RS10860	0.52	-0.3
2,450,675	-		DDA3937_RS10860	0.52	+0.6
2,450,709	+		DDA3937_RS10860	0.53	-1.1
2,450,710	-		DDA3937_RS10860	0.54	+0.2
2,450,728	+		DDA3937_RS10860	0.54	+0.3
2,450,728	+		DDA3937_RS10860	0.54	+0.6
2,450,729	-		DDA3937_RS10860	0.55	-2.3
2,450,729	-		DDA3937_RS10860	0.55	-0.7
2,450,729	-		DDA3937_RS10860	0.55	+0.5
2,450,729	-		DDA3937_RS10860	0.55	-0.6
2,450,787	+		DDA3937_RS10860	0.58	-0.2
2,450,788	-		DDA3937_RS10860	0.58	-1.3
2,450,793	+		DDA3937_RS10860	0.58	-0.1
2,450,945	-		DDA3937_RS10860	0.66	-1.3
2,450,993	+		DDA3937_RS10860	0.69	+0.3
2,450,994	-		DDA3937_RS10860	0.69	-1.7
2,450,994	-		DDA3937_RS10860	0.69	-0.0
2,450,995	+		DDA3937_RS10860	0.69	+0.3
2,450,996	-		DDA3937_RS10860	0.69	-0.7
2,450,996	-		DDA3937_RS10860	0.69	-0.7
2,450,996	-		DDA3937_RS10860	0.69	-2.2
2,450,996	-		DDA3937_RS10860	0.69	+0.5
2,451,044	+		DDA3937_RS10860	0.72	-2.0
2,451,116	-		DDA3937_RS10860	0.76	+0.9
2,451,185	-		DDA3937_RS10860	0.79	-0.4
2,451,185	-		DDA3937_RS10860	0.79	-0.1
2,451,200	-		DDA3937_RS10860	0.80	+1.2
2,451,200	-		DDA3937_RS10860	0.80	+0.8
2,451,200	-		DDA3937_RS10860	0.80	+0.3
2,451,234	+		DDA3937_RS10860	0.82	-0.3
2,451,306	+		DDA3937_RS10860	0.86	+0.3
2,451,307	-		DDA3937_RS10860	0.86	-0.0
2,451,307	-		DDA3937_RS10860	0.86	-2.5
2,451,367	-		DDA3937_RS10860	0.89	-0.7
2,451,367	-		DDA3937_RS10860	0.89	-2.3
2,451,367	-		DDA3937_RS10860	0.89	-0.2
2,451,423	+				-0.7
2,451,424	-				+0.7
2,451,433	+				-2.5
2,451,434	-				-0.1
2,451,434	-				+1.0
2,451,595	+				-0.4
2,451,618	-				-0.7
2,451,622	-				+1.4
2,451,625	+				+0.8
2,451,626	-				+1.3
2,451,626	-				-1.0
2,451,631	+				-0.0
2,451,631	+				-0.4
2,451,632	-				+2.0
2,451,632	-				+1.0
2,451,632	-				-0.7
2,451,635	+				+0.3
2,451,636	-				-0.8
2,451,636	-				-0.3
2,451,636	-				-1.0
2,451,664	-				-1.7
2,451,674	-				+0.3
2,451,674	-				-0.8
2,451,674	-				+1.0
2,451,688	-				-1.0
2,451,688	-				+1.2
2,451,721	+				-1.1
2,451,721	+				-2.9
2,451,721	+				-2.3
2,451,721	+				+3.5
2,451,721	+				-0.0
2,451,721	+				-1.7
2,451,721	+				+0.3
2,451,721	+				+0.2
2,451,721	+				-1.9
2,451,722	-				+1.5
2,451,722	-				-1.3
2,451,722	-				+0.0
2,451,722	-				+0.9
2,451,722	-				-1.3
2,451,722	-				-0.4
2,451,722	-				-2.0
2,451,760	+				-0.7
2,451,781	-				+0.3
2,451,847	+		DDA3937_RS10865	0.11	+1.9
2,451,847	+		DDA3937_RS10865	0.11	+1.5
2,451,847	+		DDA3937_RS10865	0.11	-1.3
2,451,848	-		DDA3937_RS10865	0.11	+0.1
2,451,848	-		DDA3937_RS10865	0.11	-0.3
2,451,848	-		DDA3937_RS10865	0.11	-0.7
2,451,857	+		DDA3937_RS10865	0.11	-1.7
2,451,858	-		DDA3937_RS10865	0.11	+1.1
2,451,860	-		DDA3937_RS10865	0.12	+0.5
2,451,860	-		DDA3937_RS10865	0.12	+0.0
2,451,979	+		DDA3937_RS10865	0.19	-0.3
2,451,979	+		DDA3937_RS10865	0.19	+0.3
2,451,980	-				+1.3
2,452,077	+		DDA3937_RS10865	0.25	+0.6
2,452,077	+		DDA3937_RS10865	0.25	+4.2
2,452,077	+		DDA3937_RS10865	0.25	+1.2
2,452,078	-		DDA3937_RS10865	0.26	+0.5
2,452,078	-		DDA3937_RS10865	0.26	-1.4
2,452,078	-		DDA3937_RS10865	0.26	+0.6
2,452,078	-		DDA3937_RS10865	0.26	-0.3
2,452,078	-		DDA3937_RS10865	0.26	-1.3
2,452,110	-		DDA3937_RS10865	0.28	+1.4
2,452,128	+		DDA3937_RS10865	0.29	-0.0
2,452,166	+		DDA3937_RS10865	0.31	+0.2
2,452,166	+		DDA3937_RS10865	0.31	+0.3
2,452,167	-		DDA3937_RS10865	0.31	+0.7
2,452,169	+		DDA3937_RS10865	0.31	+0.7
2,452,169	+		DDA3937_RS10865	0.31	-0.9
2,452,169	+		DDA3937_RS10865	0.31	+0.6
2,452,169	+		DDA3937_RS10865	0.31	+0.1
2,452,169	+		DDA3937_RS10865	0.31	-0.8
2,452,170	-		DDA3937_RS10865	0.31	-0.1
2,452,170	-		DDA3937_RS10865	0.31	+0.4
2,452,170	-		DDA3937_RS10865	0.31	-1.0
2,452,170	-		DDA3937_RS10865	0.31	-2.3
2,452,170	-		DDA3937_RS10865	0.31	+1.0
2,452,170	-		DDA3937_RS10865	0.31	-0.7
2,452,175	+		DDA3937_RS10865	0.32	+0.3
2,452,175	+		DDA3937_RS10865	0.32	-0.4
2,452,175	+		DDA3937_RS10865	0.32	-1.2
2,452,175	+		DDA3937_RS10865	0.32	-1.3
2,452,175	+		DDA3937_RS10865	0.32	-0.0
2,452,175	+		DDA3937_RS10865	0.32	+0.9
2,452,175	+		DDA3937_RS10865	0.32	+0.3
2,452,176	-		DDA3937_RS10865	0.32	+1.5
2,452,176	-		DDA3937_RS10865	0.32	-0.9
2,452,176	-		DDA3937_RS10865	0.32	+1.2
2,452,176	-		DDA3937_RS10865	0.32	+0.3
2,452,176	-		DDA3937_RS10865	0.32	+0.7
2,452,176	-		DDA3937_RS10865	0.32	-1.3
2,452,176	-		DDA3937_RS10865	0.32	+0.7
2,452,176	-		DDA3937_RS10865	0.32	+0.5
2,452,176	-		DDA3937_RS10865	0.32	+0.6
2,452,178	-		DDA3937_RS10865	0.32	-2.0
2,452,283	+		DDA3937_RS10865	0.39	-1.4
2,452,372	+		DDA3937_RS10865	0.44	+0.4
2,452,372	+		DDA3937_RS10865	0.44	+0.7
2,452,372	+		DDA3937_RS10865	0.44	+0.3
2,452,372	+		DDA3937_RS10865	0.44	-0.6
2,452,373	-		DDA3937_RS10865	0.45	-0.3
2,452,406	+		DDA3937_RS10865	0.47	+0.1
2,452,406	+		DDA3937_RS10865	0.47	+0.3
2,452,406	+		DDA3937_RS10865	0.47	-1.3
2,452,407	-		DDA3937_RS10865	0.47	-0.7
2,452,442	+		DDA3937_RS10865	0.49	-0.9
2,452,442	+		DDA3937_RS10865	0.49	-0.5
2,452,443	-		DDA3937_RS10865	0.49	+1.1
2,452,443	-		DDA3937_RS10865	0.49	-0.7