Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10340

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,327,990	-				-1.5
2,327,994	+				+3.4
2,327,995	-				-2.1
2,327,995	-				-0.2
2,328,020	-				+0.3
2,328,020	-				-0.2
2,328,033	+				+0.9
2,328,034	-				+0.1
2,328,034	-				+1.0
2,328,038	-				+1.1
2,328,038	-				-0.3
2,328,038	-				+0.9
2,328,038	-				-0.2
2,328,170	+		DDA3937_RS10335	0.16	+1.2
2,328,193	+		DDA3937_RS10335	0.19	-0.2
2,328,194	-		DDA3937_RS10335	0.19	+0.1
2,328,194	-		DDA3937_RS10335	0.19	-0.6
2,328,300	+		DDA3937_RS10335	0.31	+3.4
2,328,300	+		DDA3937_RS10335	0.31	-0.6
2,328,300	+		DDA3937_RS10335	0.31	+0.1
2,328,300	+		DDA3937_RS10335	0.31	+1.0
2,328,300	+		DDA3937_RS10335	0.31	-1.8
2,328,300	+		DDA3937_RS10335	0.31	+0.4
2,328,300	+		DDA3937_RS10335	0.31	+0.7
2,328,301	-		DDA3937_RS10335	0.31	-1.4
2,328,301	-		DDA3937_RS10335	0.31	-0.5
2,328,301	-		DDA3937_RS10335	0.31	-1.7
2,328,301	-		DDA3937_RS10335	0.31	+0.6
2,328,301	-		DDA3937_RS10335	0.31	-0.8
2,328,313	-		DDA3937_RS10335	0.32	-0.3
2,328,313	-		DDA3937_RS10335	0.32	-1.0
2,328,316	+		DDA3937_RS10335	0.32	+0.8
2,328,316	+		DDA3937_RS10335	0.32	-0.3
2,328,316	+		DDA3937_RS10335	0.32	+2.1
2,328,317	-		DDA3937_RS10335	0.32	-3.4
2,328,317	-		DDA3937_RS10335	0.32	-0.8
2,328,317	-				-1.6
2,328,317	-		DDA3937_RS10335	0.32	-0.2
2,328,325	+		DDA3937_RS10335	0.33	+1.4
2,328,325	+		DDA3937_RS10335	0.33	-1.3
2,328,325	+		DDA3937_RS10335	0.33	-0.6
2,328,326	-		DDA3937_RS10335	0.33	-1.4
2,328,326	-		DDA3937_RS10335	0.33	-1.9
2,328,326	-		DDA3937_RS10335	0.33	-1.1
2,328,326	-		DDA3937_RS10335	0.33	-2.5
2,328,347	+		DDA3937_RS10335	0.36	+1.2
2,328,347	+		DDA3937_RS10335	0.36	+0.9
2,328,348	-		DDA3937_RS10335	0.36	-2.4
2,328,364	+		DDA3937_RS10335	0.38	+2.5
2,328,364	+		DDA3937_RS10335	0.38	+0.7
2,328,364	+		DDA3937_RS10335	0.38	+2.7
2,328,365	-		DDA3937_RS10335	0.38	-1.2
2,328,408	+		DDA3937_RS10335	0.42	+0.9
2,328,408	+		DDA3937_RS10335	0.42	-0.6
2,328,408	+		DDA3937_RS10335	0.42	+2.6
2,328,408	+		DDA3937_RS10335	0.42	-0.2
2,328,408	+		DDA3937_RS10335	0.42	-0.1
2,328,408	+		DDA3937_RS10335	0.42	+1.3
2,328,409	-		DDA3937_RS10335	0.43	-1.4
2,328,409	-		DDA3937_RS10335	0.43	-2.1
2,328,414	+		DDA3937_RS10335	0.43	-1.5
2,328,414	+		DDA3937_RS10335	0.43	+0.5
2,328,414	+		DDA3937_RS10335	0.43	-0.2
2,328,415	-		DDA3937_RS10335	0.43	-1.5
2,328,415	-		DDA3937_RS10335	0.43	-2.6
2,328,415	-		DDA3937_RS10335	0.43	-1.8
2,328,415	-		DDA3937_RS10335	0.43	-0.4
2,328,415	-		DDA3937_RS10335	0.43	-2.8
2,328,415	-		DDA3937_RS10335	0.43	+1.2
2,328,415	-		DDA3937_RS10335	0.43	-1.4
2,328,415	-		DDA3937_RS10335	0.43	-0.8
2,328,415	-		DDA3937_RS10335	0.43	-2.7
2,328,415	-		DDA3937_RS10335	0.43	+0.7
2,328,418	+		DDA3937_RS10335	0.44	-0.2
2,328,419	-		DDA3937_RS10335	0.44	-0.9
2,328,436	+		DDA3937_RS10335	0.46	-0.2
2,328,602	-		DDA3937_RS10335	0.64	-0.5
2,328,736	+				+1.9
2,328,736	+		DDA3937_RS10335	0.79	-0.1
2,328,736	+		DDA3937_RS10335	0.79	+0.9
2,328,736	+		DDA3937_RS10335	0.79	-0.6
2,328,737	-		DDA3937_RS10335	0.79	-1.2
2,328,737	-		DDA3937_RS10335	0.79	-1.9
2,328,738	+		DDA3937_RS10335	0.79	-1.2
2,328,739	-		DDA3937_RS10335	0.79	-1.4
2,328,739	-		DDA3937_RS10335	0.79	-0.6
2,328,772	+		DDA3937_RS10335	0.83	+0.4
2,328,795	+		DDA3937_RS10335	0.85	+0.7
2,328,795	+		DDA3937_RS10335	0.85	+2.7
2,328,795	+		DDA3937_RS10335	0.85	-0.1
2,328,795	+		DDA3937_RS10335	0.85	+0.6
2,328,795	+		DDA3937_RS10335	0.85	+1.1
2,328,795	+		DDA3937_RS10335	0.85	+0.5
2,328,796	-		DDA3937_RS10335	0.85	-1.6
2,328,796	-		DDA3937_RS10335	0.85	-1.8
2,328,796	-		DDA3937_RS10335	0.85	-2.3
2,328,796	-		DDA3937_RS10335	0.85	-3.1
2,328,809	+		DDA3937_RS10335	0.87	+1.5
2,328,809	+		DDA3937_RS10335	0.87	+1.8
2,328,809	+		DDA3937_RS10335	0.87	+1.2
2,328,857	-				-2.3
2,328,924	+				+3.1
2,328,924	+				+0.5
2,328,924	+				+1.9
2,328,924	+				+0.1
2,328,924	+				+1.9
2,328,924	+				+1.2
2,328,925	-				-2.4
2,328,925	-				-2.4
2,328,925	-				-1.9
2,328,925	-				-1.2
2,328,925	-				-1.4
2,328,925	-				-0.6
2,328,925	-				-2.8
2,328,925	-				-2.0
2,328,925	-				-2.8
2,328,926	+				+0.2
2,328,926	+				+0.6
2,328,926	+				+1.4
2,328,932	+				+1.6
2,328,932	+				+2.6
2,328,932	+				-0.1
2,328,933	-				-2.1
2,328,933	-				-3.1
2,328,943	+				-0.1
2,328,944	-				-1.6
2,329,153	+		DDA3937_RS10340	0.16	-3.0
2,329,154	-		DDA3937_RS10340	0.16	-2.4
2,329,278	+		DDA3937_RS10340	0.28	+0.9
2,329,279	-		DDA3937_RS10340	0.29	-1.6
2,329,315	+		DDA3937_RS10340	0.32	-0.6
2,329,315	+		DDA3937_RS10340	0.32	-1.6
2,329,316	-		DDA3937_RS10340	0.32	-1.7
2,329,325	+		DDA3937_RS10340	0.33	-2.5
2,329,325	+		DDA3937_RS10340	0.33	-3.5
2,329,325	+		DDA3937_RS10340	0.33	-1.1
2,329,325	+		DDA3937_RS10340	0.33	-1.1
2,329,326	-		DDA3937_RS10340	0.33	-2.4
2,329,326	-		DDA3937_RS10340	0.33	-3.6
2,329,326	-		DDA3937_RS10340	0.33	-2.4
2,329,359	+		DDA3937_RS10340	0.36	-4.0
2,329,359	+		DDA3937_RS10340	0.36	-1.3
2,329,359	+		DDA3937_RS10340	0.36	-3.1
2,329,360	-		DDA3937_RS10340	0.37	-2.1
2,329,360	-		DDA3937_RS10340	0.37	+0.4
2,329,375	+		DDA3937_RS10340	0.38	-1.6
2,329,589	+		DDA3937_RS10340	0.59	-1.5
2,329,589	+		DDA3937_RS10340	0.59	-2.0
2,329,745	+		DDA3937_RS10340	0.74	-2.7
2,329,746	+		DDA3937_RS10340	0.74	-1.7
2,329,746	+		DDA3937_RS10340	0.74	-3.2
2,329,747	-		DDA3937_RS10340	0.75	+0.6
2,329,747	-		DDA3937_RS10340	0.75	-3.9
2,329,793	+		DDA3937_RS10340	0.79	-2.3
2,329,793	+		DDA3937_RS10340	0.79	-0.1
2,329,793	+		DDA3937_RS10340	0.79	-2.8
2,329,793	+		DDA3937_RS10340	0.79	-2.6
2,329,793	+		DDA3937_RS10340	0.79	-2.6
2,329,794	-		DDA3937_RS10340	0.79	-1.2
2,329,794	-		DDA3937_RS10340	0.79	-2.4
2,329,876	-		DDA3937_RS10340	0.87	-3.4
2,329,879	+		DDA3937_RS10340	0.88	-2.8
2,329,913	+				-1.0
2,329,919	-				-2.0
2,329,931	+				-3.3
2,330,003	+				-2.2
2,330,004	-				-0.1
2,330,039	+				-0.1
2,330,039	+				-0.4
2,330,039	+				+0.7
2,330,039	+				+0.2
2,330,040	-				-0.5
2,330,040	-				-1.2
2,330,049	+				+0.4
2,330,049	+				-1.6
2,330,050	-				+1.1
2,330,050	-				-0.4
2,330,055	+				+0.5
2,330,056	-				+0.8
2,330,072	+				-1.2
2,330,072	+				-0.4
2,330,072	+				+0.2
2,330,072	+				+0.8
2,330,084	+				+1.7
2,330,085	-				-1.2
2,330,137	+				-0.5
2,330,139	+				-1.1
2,330,139	+				+0.0
2,330,139	+				+0.0
2,330,189	+				+0.2
2,330,191	+				-0.3
2,330,191	+				-1.2
2,330,191	+				-1.6
2,330,191	+				-1.2
2,330,193	+				+1.5
2,330,375	+		DDA3937_RS10345	0.19	-1.2
2,330,517	+		DDA3937_RS10345	0.34	-1.0