Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07705

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,734,891	+		DDA3937_RS07695	0.81	-1.3
1,734,892	-		DDA3937_RS07695	0.81	-0.5
1,734,946	+		DDA3937_RS07695	0.85	+1.0
1,734,946	+		DDA3937_RS07695	0.85	+0.2
1,734,953	+		DDA3937_RS07695	0.85	+0.6
1,734,953	+		DDA3937_RS07695	0.85	-0.3
1,734,953	+		DDA3937_RS07695	0.85	+0.8
1,734,954	-		DDA3937_RS07695	0.85	-2.1
1,734,954	-		DDA3937_RS07695	0.85	+0.3
1,734,954	-		DDA3937_RS07695	0.85	+1.1
1,734,954	-		DDA3937_RS07695	0.85	+1.7
1,734,954	-		DDA3937_RS07695	0.85	+0.5
1,734,954	-		DDA3937_RS07695	0.85	+2.4
1,734,954	-		DDA3937_RS07695	0.85	-1.8
1,734,954	-		DDA3937_RS07695	0.85	-1.3
1,735,187	+				-0.8
1,735,187	+				+0.6
1,735,188	-				-0.5
1,735,188	-				-1.3
1,735,190	+				-0.2
1,735,190	+				+1.8
1,735,199	-				-1.3
1,735,247	+				-0.0
1,735,248	-				+0.5
1,735,324	+		DDA3937_RS07700	0.17	-0.6
1,735,324	+		DDA3937_RS07700	0.17	+0.7
1,735,324	+		DDA3937_RS07700	0.17	+2.3
1,735,325	-		DDA3937_RS07700	0.17	+0.1
1,735,325	-		DDA3937_RS07700	0.17	+0.2
1,735,376	+		DDA3937_RS07700	0.25	+0.1
1,735,377	-		DDA3937_RS07700	0.25	+1.8
1,735,377	-		DDA3937_RS07700	0.25	-0.2
1,735,393	-		DDA3937_RS07700	0.27	-0.1
1,735,426	+		DDA3937_RS07700	0.32	+0.2
1,735,557	+		DDA3937_RS07700	0.52	-0.6
1,735,598	-		DDA3937_RS07700	0.58	-0.8
1,735,754	+		DDA3937_RS07700	0.82	-0.3
1,735,754	+		DDA3937_RS07700	0.82	+0.6
1,735,754	+		DDA3937_RS07700	0.82	-3.0
1,735,754	+		DDA3937_RS07700	0.82	-2.2
1,735,755	-				+0.9
1,735,755	-		DDA3937_RS07700	0.82	+0.1
1,735,755	-		DDA3937_RS07700	0.82	-0.1
1,735,755	-		DDA3937_RS07700	0.82	-1.5
1,735,755	-		DDA3937_RS07700	0.82	+0.5
1,735,767	-		DDA3937_RS07700	0.84	+0.1
1,735,798	+		DDA3937_RS07700	0.88	+1.5
1,735,799	-		DDA3937_RS07700	0.89	+0.7
1,735,799	-		DDA3937_RS07700	0.89	-0.8
1,735,832	+				-0.9
1,735,832	+				+2.3
1,735,833	-				-2.3
1,735,910	+				+0.7
1,735,931	+				-0.1
1,736,046	+				-0.5
1,736,064	+				+3.7
1,736,215	+		DDA3937_RS07705	0.15	-0.3
1,736,293	+		DDA3937_RS07705	0.18	-0.4
1,736,294	-		DDA3937_RS07705	0.18	-0.1
1,736,307	+		DDA3937_RS07705	0.19	+0.9
1,736,307	+		DDA3937_RS07705	0.19	+2.8
1,736,307	+		DDA3937_RS07705	0.19	-0.3
1,736,307	+		DDA3937_RS07705	0.19	-2.3
1,736,307	+		DDA3937_RS07705	0.19	-0.1
1,736,308	-		DDA3937_RS07705	0.19	+0.8
1,736,308	-		DDA3937_RS07705	0.19	-0.3
1,736,308	-		DDA3937_RS07705	0.19	+1.3
1,736,422	+		DDA3937_RS07705	0.24	-0.1
1,736,422	+		DDA3937_RS07705	0.24	+0.3
1,736,423	-		DDA3937_RS07705	0.24	-1.4
1,736,423	-		DDA3937_RS07705	0.24	-2.1
1,736,427	-		DDA3937_RS07705	0.24	-1.0
1,736,427	-		DDA3937_RS07705	0.24	+0.8
1,736,427	-		DDA3937_RS07705	0.24	+0.2
1,736,621	+				+2.2
1,736,621	+		DDA3937_RS07705	0.32	+0.6
1,736,622	-		DDA3937_RS07705	0.33	-0.4
1,736,622	-		DDA3937_RS07705	0.33	-2.3
1,736,629	+		DDA3937_RS07705	0.33	-2.7
1,736,630	-		DDA3937_RS07705	0.33	+0.5
1,736,630	-		DDA3937_RS07705	0.33	+1.3
1,736,630	-		DDA3937_RS07705	0.33	+0.8
1,736,630	-		DDA3937_RS07705	0.33	-0.3
1,736,699	+		DDA3937_RS07705	0.36	-1.1
1,736,700	-		DDA3937_RS07705	0.36	+0.1
1,736,700	-		DDA3937_RS07705	0.36	-3.2
1,736,706	+		DDA3937_RS07705	0.36	+0.2
1,736,707	-		DDA3937_RS07705	0.36	+1.1
1,736,707	-		DDA3937_RS07705	0.36	-1.0
1,736,707	-		DDA3937_RS07705	0.36	-2.2
1,736,740	+		DDA3937_RS07705	0.38	-0.2
1,736,740	+		DDA3937_RS07705	0.38	+1.6
1,736,741	-		DDA3937_RS07705	0.38	-0.2
1,736,780	+		DDA3937_RS07705	0.40	-0.4
1,736,781	-		DDA3937_RS07705	0.40	+2.2
1,736,781	-		DDA3937_RS07705	0.40	+2.5
1,736,781	-		DDA3937_RS07705	0.40	-1.4
1,736,895	-		DDA3937_RS07705	0.45	-0.2
1,737,194	-		DDA3937_RS07705	0.58	+0.2
1,737,268	+		DDA3937_RS07705	0.61	-0.2
1,737,279	+		DDA3937_RS07705	0.62	+0.3
1,737,291	+		DDA3937_RS07705	0.62	-0.8
1,737,292	-		DDA3937_RS07705	0.62	-0.1
1,737,295	+		DDA3937_RS07705	0.62	-0.5
1,737,295	+		DDA3937_RS07705	0.62	-2.3
1,737,299	-		DDA3937_RS07705	0.62	-1.3
1,737,385	+		DDA3937_RS07705	0.66	-1.5
1,737,433	+		DDA3937_RS07705	0.68	-0.9
1,737,433	+		DDA3937_RS07705	0.68	+1.6
1,737,433	+		DDA3937_RS07705	0.68	+1.2
1,737,434	-		DDA3937_RS07705	0.68	-0.7
1,737,434	-		DDA3937_RS07705	0.68	-0.8
1,737,434	-		DDA3937_RS07705	0.68	+1.1
1,737,434	-		DDA3937_RS07705	0.68	-1.8
1,737,490	+		DDA3937_RS07705	0.71	-1.4
1,737,490	+		DDA3937_RS07705	0.71	-1.7
1,737,490	+		DDA3937_RS07705	0.71	-0.7
1,737,491	-		DDA3937_RS07705	0.71	+0.2
1,737,571	+		DDA3937_RS07705	0.74	+1.5
1,737,571	+		DDA3937_RS07705	0.74	-0.1
1,737,571	+		DDA3937_RS07705	0.74	+0.8
1,737,571	+		DDA3937_RS07705	0.74	-1.3
1,737,571	+		DDA3937_RS07705	0.74	+1.4
1,737,571	+		DDA3937_RS07705	0.74	-1.5
1,737,571	+		DDA3937_RS07705	0.74	+0.2
1,737,571	+		DDA3937_RS07705	0.74	+0.2
1,737,571	+		DDA3937_RS07705	0.74	-1.4
1,737,571	+		DDA3937_RS07705	0.74	+1.0
1,737,571	+		DDA3937_RS07705	0.74	+0.1
1,737,571	+		DDA3937_RS07705	0.74	-1.5
1,737,571	+		DDA3937_RS07705	0.74	+1.5
1,737,571	+		DDA3937_RS07705	0.74	-0.2
1,737,572	-		DDA3937_RS07705	0.75	-0.4
1,737,572	-		DDA3937_RS07705	0.75	-0.0
1,737,572	-		DDA3937_RS07705	0.75	+0.9
1,737,572	-		DDA3937_RS07705	0.75	-1.0
1,737,572	-		DDA3937_RS07705	0.75	-1.0
1,737,572	-		DDA3937_RS07705	0.75	-0.9
1,737,572	-		DDA3937_RS07705	0.75	+0.0
1,737,572	-		DDA3937_RS07705	0.75	+0.7
1,737,573	+		DDA3937_RS07705	0.75	+1.1
1,737,573	+		DDA3937_RS07705	0.75	+0.3
1,737,573	+		DDA3937_RS07705	0.75	-2.1
1,737,573	+		DDA3937_RS07705	0.75	-1.0
1,737,573	+		DDA3937_RS07705	0.75	-0.4
1,737,573	+		DDA3937_RS07705	0.75	-0.7
1,737,573	+		DDA3937_RS07705	0.75	+0.5
1,737,573	+		DDA3937_RS07705	0.75	+0.1
1,737,573	+		DDA3937_RS07705	0.75	+0.5
1,737,573	+		DDA3937_RS07705	0.75	-1.4
1,737,573	+		DDA3937_RS07705	0.75	-0.6
1,737,573	+		DDA3937_RS07705	0.75	-0.3
1,737,573	+		DDA3937_RS07705	0.75	+0.5
1,737,573	+		DDA3937_RS07705	0.75	-0.1
1,737,574	-		DDA3937_RS07705	0.75	-2.3
1,737,688	+		DDA3937_RS07705	0.80	+0.6
1,737,723	+		DDA3937_RS07705	0.81	+1.0
1,737,723	+		DDA3937_RS07705	0.81	+2.5
1,737,724	-		DDA3937_RS07705	0.81	-0.1
1,737,751	+		DDA3937_RS07705	0.82	-0.7
1,737,751	+		DDA3937_RS07705	0.82	+0.0
1,737,753	+		DDA3937_RS07705	0.83	+2.8
1,737,753	+		DDA3937_RS07705	0.83	+0.5
1,737,753	+		DDA3937_RS07705	0.83	+2.8
1,737,753	+		DDA3937_RS07705	0.83	-1.8
1,737,753	+		DDA3937_RS07705	0.83	+0.3
1,737,753	+		DDA3937_RS07705	0.83	-0.1
1,737,753	+		DDA3937_RS07705	0.83	+1.3
1,737,753	+		DDA3937_RS07705	0.83	+0.5
1,737,754	-		DDA3937_RS07705	0.83	+1.3
1,737,754	-		DDA3937_RS07705	0.83	+0.5
1,737,754	-		DDA3937_RS07705	0.83	-0.5
1,737,755	+		DDA3937_RS07705	0.83	+1.2
1,737,755	+		DDA3937_RS07705	0.83	-0.5
1,737,755	+		DDA3937_RS07705	0.83	+1.9
1,737,755	+		DDA3937_RS07705	0.83	+0.3
1,737,755	+		DDA3937_RS07705	0.83	+0.8
1,737,755	+		DDA3937_RS07705	0.83	-0.4
1,737,755	+		DDA3937_RS07705	0.83	+0.4
1,737,756	-		DDA3937_RS07705	0.83	+0.9
1,737,756	-		DDA3937_RS07705	0.83	+1.9
1,737,756	-		DDA3937_RS07705	0.83	-0.3
1,737,808	+		DDA3937_RS07705	0.85	-1.3
1,737,808	+		DDA3937_RS07705	0.85	+0.3
1,737,808	+		DDA3937_RS07705	0.85	+1.1
1,737,809	-				-0.5
1,737,814	-		DDA3937_RS07705	0.85	-0.7
1,737,814	-		DDA3937_RS07705	0.85	+0.0
1,737,824	-		DDA3937_RS07705	0.86	-1.1
1,737,824	-		DDA3937_RS07705	0.86	-1.7
1,737,858	+		DDA3937_RS07705	0.87	-0.1
1,737,859	-		DDA3937_RS07705	0.87	-0.2
1,737,884	+		DDA3937_RS07705	0.88	+0.9
1,737,927	+				+1.0
1,737,927	+				+2.8
1,737,927	+				+0.3
1,737,927	+				-1.4
1,737,928	-				+0.2
1,737,948	+				-0.8
1,737,948	+				+1.3
1,737,949	-				+0.1
1,737,949	-				+0.0
1,737,949	-				-1.4
1,737,949	-				-1.8
1,737,949	-				+1.7
1,737,949	-				+0.9
1,737,969	+				+0.1
1,737,969	+				+0.6
1,737,970	-				-0.6
1,737,973	+				-1.8
1,737,974	-				-0.3
1,738,077	+				+0.2
1,738,078	-				+1.1
1,738,158	+				+0.8
1,738,159	-				-0.1
1,738,159	-				+0.8
1,738,172	+				-1.4
1,738,173	-				+0.9
1,738,173	-				-0.1
1,738,192	+				+1.5
1,738,281	+				+0.7
1,738,340	-				+2.0
1,738,417	-				-2.5
1,738,496	+				-0.8
1,738,496	+				+2.4
1,738,496	+				+2.3
1,738,520	-				+0.2
1,738,528	+				+1.8
1,738,528	+				+1.7
1,738,559	-				+1.0
1,738,559	-				+0.3
1,738,571	+				+1.9
1,738,571	+				-0.1
1,738,571	+				+1.1
1,738,571	+				+0.4
1,738,571	+				+1.5
1,738,572	-				+0.5
1,738,572	-				+2.3
1,738,576	-				+0.8
1,738,605	-				+1.5
1,738,697	+				+1.7
1,738,731	+				-0.5
1,738,731	+				+1.0
1,738,732	-				-0.5
1,738,732	-				-1.8
1,738,732	-				-0.5
1,738,735	+				+1.5
1,738,735	+				+2.1
1,738,735	+				+3.3
1,738,735	+				+1.9
1,738,736	-				-0.3
1,738,736	-				-0.8
1,738,739	+				+0.4
1,738,739	+				-0.2
1,738,916	-		DDA3937_RS07710	0.20	+0.5
1,739,046	+		DDA3937_RS07710	0.29	+1.6
1,739,047	-		DDA3937_RS07710	0.29	-0.8
1,739,063	+		DDA3937_RS07710	0.30	+4.6
1,739,143	+		DDA3937_RS07710	0.36	+1.2
1,739,143	+		DDA3937_RS07710	0.36	+2.5