Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS07115

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
1,599,990	-				-1.1
1,600,022	+				+1.7
1,600,022	+				+4.5
1,600,023	-				+0.3
1,600,023	-				+0.4
1,600,092	+				+2.2
1,600,099	+				+2.2
1,600,100	-				+1.5
1,600,105	+				+3.4
1,600,105	+				+4.3
1,600,106	-				-0.5
1,600,138	+				+4.1
1,600,147	+				+5.6
1,600,271	-				+3.4
1,600,338	+				+2.8
1,600,375	-				+3.7
1,600,393	-				+2.8
1,600,430	+				+6.6
1,600,488	-				-2.1
1,600,488	-				+4.8
1,600,490	+				+3.7
1,600,570	-				+0.7
1,600,571	+				+6.4
1,600,571	+				+1.4
1,600,572	-				-0.2
1,600,606	+				+5.0
1,600,606	+				+5.7
1,600,606	+				+6.6
1,600,606	+				+7.8
1,600,607	-				-1.8
1,600,607	-				-1.3
1,600,607	-				+0.4
1,600,607	-				-1.9
1,600,607	-				-1.1
1,600,607	-				-0.8
1,600,607	-				-0.2
1,600,607	-				-0.0
1,600,607	-				+0.8
1,600,616	-				-1.5
1,600,633	+				+7.0
1,600,663	-				+0.5
1,600,663	-				+3.0
1,600,692	-				-0.9
1,600,712	-				+0.8
1,600,712	-				+3.6
1,600,718	+				+6.2
1,600,718	+				+4.9
1,600,719	-				-1.3
1,600,719	-				-1.0
1,600,719	-				-1.4
1,600,719	-				+0.5
1,600,719	-				-3.2
1,600,727	+				+7.1
1,600,727	+				+7.4
1,600,727	+				+5.2
1,600,727	+				+6.3
1,600,727	+				+6.0
1,600,728	-				-2.3
1,600,728	-				-1.7
1,600,728	-				-1.3
1,600,728	-				+0.0
1,600,728	-				-0.4
1,600,728	-				-1.8
1,600,728	-				-1.1
1,600,729	+				+5.9
1,600,729	+				+6.1
1,600,729	+				+5.3
1,600,729	+				+5.7
1,600,729	+				+6.2
1,600,731	+				+6.5
1,600,731	+				+7.5
1,600,731	+				+3.2
1,600,731	+				+7.3
1,600,731	+				+5.5
1,600,732	-				-1.5
1,600,732	-				-0.7
1,600,746	-				-0.9
1,600,821	+				-1.8
1,600,821	+				-1.0
1,600,821	+				-0.1
1,600,822	-				-2.3
1,600,822	-				-0.5
1,600,836	+				-2.7
1,600,836	+				-1.5
1,600,837	-				-1.9
1,600,888	-				-1.5
1,600,888	-				-3.1
1,600,910	-				+0.5
1,600,917	+		DDA3937_RS07115	0.10	-1.5
1,600,917	+		DDA3937_RS07115	0.10	-3.1
1,600,917	+		DDA3937_RS07115	0.10	-0.5
1,600,917	+		DDA3937_RS07115	0.10	-1.8
1,600,917	+		DDA3937_RS07115	0.10	-0.8
1,600,917	+		DDA3937_RS07115	0.10	-1.2
1,600,917	+				-0.1
1,600,917	+		DDA3937_RS07115	0.10	-0.4
1,600,917	+		DDA3937_RS07115	0.10	+0.5
1,600,917	+		DDA3937_RS07115	0.10	-0.7
1,600,918	-		DDA3937_RS07115	0.10	-0.1
1,600,918	-		DDA3937_RS07115	0.10	-1.8
1,600,918	-		DDA3937_RS07115	0.10	-0.5
1,600,948	-		DDA3937_RS07115	0.12	-2.8
1,600,983	+		DDA3937_RS07115	0.14	-2.8
1,600,984	-		DDA3937_RS07115	0.14	-1.2
1,601,170	+		DDA3937_RS07115	0.26	-2.3
1,601,172	+		DDA3937_RS07115	0.26	-2.3
1,601,177	-		DDA3937_RS07115	0.27	-1.8
1,601,177	-		DDA3937_RS07115	0.27	-3.1
1,601,224	-		DDA3937_RS07115	0.30	-1.8
1,601,224	-		DDA3937_RS07115	0.30	-2.3
1,601,277	+		DDA3937_RS07115	0.33	-2.3
1,601,277	+		DDA3937_RS07115	0.33	-2.5
1,601,277	+		DDA3937_RS07115	0.33	-2.5
1,601,278	-		DDA3937_RS07115	0.33	-0.5
1,601,352	+		DDA3937_RS07115	0.38	-3.7
1,601,357	-		DDA3937_RS07115	0.38	-2.8
1,601,438	-		DDA3937_RS07115	0.44	-1.5
1,601,461	+		DDA3937_RS07115	0.45	-1.5
1,601,461	+		DDA3937_RS07115	0.45	-0.2
1,601,462	-		DDA3937_RS07115	0.45	-0.7
1,601,463	+		DDA3937_RS07115	0.45	-1.8
1,601,464	-		DDA3937_RS07115	0.45	-0.8
1,601,464	-		DDA3937_RS07115	0.45	-1.6
1,601,466	+		DDA3937_RS07115	0.45	-1.2
1,601,466	+		DDA3937_RS07115	0.45	-1.3
1,601,466	+		DDA3937_RS07115	0.45	-1.7
1,601,467	-		DDA3937_RS07115	0.45	-1.3
1,601,467	-		DDA3937_RS07115	0.45	-1.0
1,601,470	-		DDA3937_RS07115	0.46	+0.0
1,601,532	+		DDA3937_RS07115	0.50	-0.9
1,601,532	+		DDA3937_RS07115	0.50	-2.0
1,601,533	-		DDA3937_RS07115	0.50	-1.1
1,601,565	+		DDA3937_RS07115	0.52	-0.1
1,601,565	+		DDA3937_RS07115	0.52	-2.5
1,601,565	+		DDA3937_RS07115	0.52	-1.6
1,601,565	+		DDA3937_RS07115	0.52	-3.7
1,601,566	-		DDA3937_RS07115	0.52	-1.1
1,601,751	+		DDA3937_RS07115	0.64	-1.2
1,601,867	-		DDA3937_RS07115	0.71	-0.5
1,601,867	-		DDA3937_RS07115	0.71	-0.9
1,601,950	+				+0.5
1,601,951	-		DDA3937_RS07115	0.76	-0.5
1,601,951	-		DDA3937_RS07115	0.76	-1.3
1,601,958	+		DDA3937_RS07115	0.77	-0.6
1,601,958	+		DDA3937_RS07115	0.77	+0.0
1,601,959	-		DDA3937_RS07115	0.77	-1.5
1,601,962	+		DDA3937_RS07115	0.77	-2.4
1,601,963	-		DDA3937_RS07115	0.77	-1.5
1,602,076	-		DDA3937_RS07115	0.84	-1.5
1,602,112	+		DDA3937_RS07115	0.87	-0.8
1,602,113	-		DDA3937_RS07115	0.87	+0.1
1,602,138	-		DDA3937_RS07115	0.88	-2.1
1,602,208	+				-0.3
1,602,208	+				-3.2
1,602,208	+				+0.5
1,602,209	-				-1.9
1,602,209	-				-0.5
1,602,274	+				-1.3
1,602,275	-				-0.7
1,602,275	-				-1.4
1,602,275	-				-0.3
1,602,275	-				-1.5
1,602,275	-				-1.8
1,602,316	+				+0.7
1,602,316	+				-0.6
1,602,317	-				-1.1
1,602,356	+				-0.2
1,602,356	+				-1.8
1,602,356	+				+0.1
1,602,356	+				+0.2
1,602,356	+				-1.3
1,602,357	-				-1.0
1,602,357	-				-0.8
1,602,357	-				+1.1
1,602,357	-				-0.8
1,602,372	+				+0.3
1,602,372	+				-0.1
1,602,372	+				+0.1
1,602,373	-				-1.2
1,602,373	-				-1.2
1,602,388	+				-0.2
1,602,388	+				-0.6
1,602,389	-				-1.8
1,602,389	-				-0.9
1,602,389	-				-1.1
1,602,389	-				-1.8
1,602,470	-				+0.5
1,602,502	+				-0.6
1,602,502	+				+1.3
1,602,503	-				+0.3
1,602,503	-				-1.3
1,602,515	+				-1.8
1,602,599	-				-0.7
1,602,712	+				+0.9
1,602,712	+				-0.9
1,602,723	+				+0.7
1,602,782	+		DDA3937_RS07120	0.17	-0.3
1,602,782	+		DDA3937_RS07120	0.17	-0.8
1,602,782	+		DDA3937_RS07120	0.17	+0.1
1,602,782	+		DDA3937_RS07120	0.17	+1.2
1,602,782	+		DDA3937_RS07120	0.17	-0.8
1,602,782	+		DDA3937_RS07120	0.17	-2.3
1,602,783	-		DDA3937_RS07120	0.17	-0.8
1,602,783	-		DDA3937_RS07120	0.17	-1.8
1,602,783	-		DDA3937_RS07120	0.17	+1.5
1,602,783	-		DDA3937_RS07120	0.17	+0.6
1,602,783	-		DDA3937_RS07120	0.17	-0.4
1,602,783	-		DDA3937_RS07120	0.17	-0.3
1,602,783	-		DDA3937_RS07120	0.17	-0.3
1,602,783	-		DDA3937_RS07120	0.17	-1.4
1,602,783	-		DDA3937_RS07120	0.17	-2.1
1,602,783	-		DDA3937_RS07120	0.17	+1.7
1,602,783	-		DDA3937_RS07120	0.17	-0.7
1,602,891	+		DDA3937_RS07120	0.30	-1.5
1,602,892	+		DDA3937_RS07120	0.30	-0.3
1,602,892	+		DDA3937_RS07120	0.30	+0.4
1,602,892	+		DDA3937_RS07120	0.30	-0.5
1,602,892	+		DDA3937_RS07120	0.30	-0.4
1,602,892	+		DDA3937_RS07120	0.30	+0.6
1,602,892	+		DDA3937_RS07120	0.30	-0.1
1,602,892	+		DDA3937_RS07120	0.30	-1.3
1,602,892	+		DDA3937_RS07120	0.30	+1.2
1,602,892	+		DDA3937_RS07120	0.30	-0.7
1,602,892	+		DDA3937_RS07120	0.30	+0.5
1,602,892	+		DDA3937_RS07120	0.30	-0.3
1,602,892	+		DDA3937_RS07120	0.30	+2.3
1,602,892	+		DDA3937_RS07120	0.30	-2.7
1,602,892	+		DDA3937_RS07120	0.30	-1.5
1,602,892	+		DDA3937_RS07120	0.30	-1.8
1,602,892	+		DDA3937_RS07120	0.30	-0.2
1,602,893	-		DDA3937_RS07120	0.30	-1.5
1,602,893	-		DDA3937_RS07120	0.30	+0.9
1,602,893	-		DDA3937_RS07120	0.30	+0.3
1,602,893	-		DDA3937_RS07120	0.30	-0.0
1,602,893	-		DDA3937_RS07120	0.30	+2.5
1,602,893	-		DDA3937_RS07120	0.30	-1.4
1,602,893	-		DDA3937_RS07120	0.30	-2.5
1,602,893	-		DDA3937_RS07120	0.30	+0.5
1,602,893	-		DDA3937_RS07120	0.30	+0.3
1,602,893	-		DDA3937_RS07120	0.30	-0.3
1,602,893	-		DDA3937_RS07120	0.30	-0.1
1,602,893	-		DDA3937_RS07120	0.30	-3.4
1,602,893	-		DDA3937_RS07120	0.30	-3.7
1,602,893	-		DDA3937_RS07120	0.30	-1.8
1,602,894	+		DDA3937_RS07120	0.30	-1.8
1,602,895	-		DDA3937_RS07120	0.30	-0.5
1,603,145	-		DDA3937_RS07120	0.60	-0.4
1,603,145	-		DDA3937_RS07120	0.60	+0.1