Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS17710

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,038,189	-		DDA3937_RS17700	0.83	+1.3
4,038,323	-				+0.6
4,038,370	+				+1.4
4,038,371	+				-0.2
4,038,371	+				+2.0
4,038,372	-				-0.7
4,038,373	+				-0.5
4,038,373	+				-1.5
4,038,373	+				+1.4
4,038,373	+				+0.6
4,038,374	-				+0.5
4,038,374	-				-0.9
4,038,374	-				-1.6
4,038,374	-				+0.7
4,038,374	-				-2.4
4,038,379	+				-0.5
4,038,379	+				+1.1
4,038,380	-				-0.9
4,038,380	-				-1.4
4,038,380	-				-0.0
4,038,380	-				+0.1
4,038,383	+				+0.7
4,038,384	-				-0.1
4,038,412	+				+0.2
4,038,452	+		DDA3937_RS17705	0.11	-1.3
4,038,474	-		DDA3937_RS17705	0.15	-0.5
4,038,474	-		DDA3937_RS17705	0.15	-0.6
4,038,496	+		DDA3937_RS17705	0.18	+0.5
4,038,496	+		DDA3937_RS17705	0.18	-0.3
4,038,496	+		DDA3937_RS17705	0.18	-0.7
4,038,496	+		DDA3937_RS17705	0.18	-0.9
4,038,577	+		DDA3937_RS17705	0.30	+1.2
4,038,578	-		DDA3937_RS17705	0.30	-0.2
4,038,578	-		DDA3937_RS17705	0.30	+0.5
4,038,581	+		DDA3937_RS17705	0.30	+0.3
4,038,581	+		DDA3937_RS17705	0.30	-0.6
4,038,581	+		DDA3937_RS17705	0.30	+0.5
4,038,581	+		DDA3937_RS17705	0.30	+0.7
4,038,581	+		DDA3937_RS17705	0.30	+0.2
4,038,581	+		DDA3937_RS17705	0.30	+0.3
4,038,581	+		DDA3937_RS17705	0.30	-1.0
4,038,581	+		DDA3937_RS17705	0.30	-0.8
4,038,581	+		DDA3937_RS17705	0.30	+0.5
4,038,581	+		DDA3937_RS17705	0.30	+1.1
4,038,581	+		DDA3937_RS17705	0.30	+0.3
4,038,581	+		DDA3937_RS17705	0.30	-1.5
4,038,581	+		DDA3937_RS17705	0.30	+0.5
4,038,581	+		DDA3937_RS17705	0.30	+0.1
4,038,581	+		DDA3937_RS17705	0.30	-0.3
4,038,581	+		DDA3937_RS17705	0.30	-1.3
4,038,582	-		DDA3937_RS17705	0.31	-0.9
4,038,582	-		DDA3937_RS17705	0.31	-0.6
4,038,582	-		DDA3937_RS17705	0.31	+0.9
4,038,582	-		DDA3937_RS17705	0.31	+0.4
4,038,582	-		DDA3937_RS17705	0.31	-0.1
4,038,582	-		DDA3937_RS17705	0.31	-3.2
4,038,582	-		DDA3937_RS17705	0.31	-0.1
4,038,582	-		DDA3937_RS17705	0.31	+0.3
4,038,582	-		DDA3937_RS17705	0.31	+0.5
4,038,582	-		DDA3937_RS17705	0.31	+0.3
4,038,582	-		DDA3937_RS17705	0.31	-1.7
4,038,582	-		DDA3937_RS17705	0.31	-0.2
4,038,583	+		DDA3937_RS17705	0.31	-0.3
4,038,584	-		DDA3937_RS17705	0.31	+1.2
4,038,584	-		DDA3937_RS17705	0.31	-0.2
4,038,584	-		DDA3937_RS17705	0.31	+0.4
4,038,603	-		DDA3937_RS17705	0.34	+0.6
4,038,603	-		DDA3937_RS17705	0.34	-0.0
4,038,603	-		DDA3937_RS17705	0.34	-0.9
4,038,606	-		DDA3937_RS17705	0.34	+0.5
4,038,606	-		DDA3937_RS17705	0.34	-0.5
4,038,639	+		DDA3937_RS17705	0.39	+1.6
4,038,640	-		DDA3937_RS17705	0.39	-0.3
4,038,675	+		DDA3937_RS17705	0.44	-0.7
4,038,675	+		DDA3937_RS17705	0.44	-2.6
4,038,675	+		DDA3937_RS17705	0.44	-1.1
4,038,675	+		DDA3937_RS17705	0.44	+0.4
4,038,675	+		DDA3937_RS17705	0.44	+0.6
4,038,676	-		DDA3937_RS17705	0.44	-1.7
4,038,676	-		DDA3937_RS17705	0.44	+0.9
4,038,676	-		DDA3937_RS17705	0.44	-0.5
4,038,676	-		DDA3937_RS17705	0.44	-0.6
4,038,679	+		DDA3937_RS17705	0.45	-0.4
4,038,679	+		DDA3937_RS17705	0.45	+0.5
4,038,680	-		DDA3937_RS17705	0.45	-0.3
4,038,693	-		DDA3937_RS17705	0.47	-0.8
4,038,742	+		DDA3937_RS17705	0.54	+0.7
4,038,743	-		DDA3937_RS17705	0.54	-0.7
4,038,743	-		DDA3937_RS17705	0.54	+0.8
4,038,743	-		DDA3937_RS17705	0.54	-1.3
4,038,743	-		DDA3937_RS17705	0.54	+0.2
4,038,743	-		DDA3937_RS17705	0.54	-1.3
4,038,751	+		DDA3937_RS17705	0.55	+0.1
4,038,751	+		DDA3937_RS17705	0.55	-0.2
4,038,752	-		DDA3937_RS17705	0.56	-0.5
4,038,752	-		DDA3937_RS17705	0.56	+2.5
4,038,752	-		DDA3937_RS17705	0.56	-2.1
4,038,752	-		DDA3937_RS17705	0.56	-0.3
4,038,781	-		DDA3937_RS17705	0.60	+0.6
4,038,798	+		DDA3937_RS17705	0.62	-0.8
4,038,799	-		DDA3937_RS17705	0.62	+0.3
4,038,799	-		DDA3937_RS17705	0.62	-0.1
4,038,814	-		DDA3937_RS17705	0.65	-2.3
4,038,814	-		DDA3937_RS17705	0.65	-0.8
4,038,814	-		DDA3937_RS17705	0.65	-0.1
4,038,875	-		DDA3937_RS17705	0.74	-0.5
4,038,877	+		DDA3937_RS17705	0.74	+1.3
4,038,877	+		DDA3937_RS17705	0.74	-0.6
4,038,877	+		DDA3937_RS17705	0.74	-1.9
4,038,877	+		DDA3937_RS17705	0.74	-1.9
4,038,878	-		DDA3937_RS17705	0.74	+0.2
4,038,878	-		DDA3937_RS17705	0.74	-1.1
4,038,890	-		DDA3937_RS17705	0.76	+0.3
4,038,890	-		DDA3937_RS17705	0.76	+0.3
4,039,008	+				+0.3
4,039,008	+				+0.5
4,039,008	+				+0.9
4,039,008	+				+0.7
4,039,009	-				+0.9
4,039,012	+				-0.5
4,039,012	+				+0.3
4,039,041	+				+1.5
4,039,077	+				-0.5
4,039,288	+		DDA3937_RS17710	0.20	-0.5
4,039,304	-		DDA3937_RS17710	0.21	+0.1
4,039,867	+		DDA3937_RS17710	0.73	-0.9
4,039,868	-		DDA3937_RS17710	0.74	-0.9
4,039,868	-		DDA3937_RS17710	0.74	-1.2
4,039,963	+		DDA3937_RS17710	0.82	-1.3
4,039,963	+		DDA3937_RS17710	0.82	-2.3
4,039,963	+		DDA3937_RS17710	0.82	-1.1
4,039,963	+		DDA3937_RS17710	0.82	-3.0
4,039,963	+		DDA3937_RS17710	0.82	-0.9
4,039,963	+		DDA3937_RS17710	0.82	+0.8
4,039,963	+		DDA3937_RS17710	0.82	-0.5
4,039,963	+		DDA3937_RS17710	0.82	-1.5
4,039,963	+		DDA3937_RS17710	0.82	-2.2
4,039,963	+		DDA3937_RS17710	0.82	-0.7
4,039,963	+		DDA3937_RS17710	0.82	-0.5
4,039,964	-		DDA3937_RS17710	0.82	-2.4
4,039,964	-		DDA3937_RS17710	0.82	-1.3
4,039,964	-		DDA3937_RS17710	0.82	-1.4
4,039,964	-		DDA3937_RS17710	0.82	-0.9
4,039,964	-		DDA3937_RS17710	0.82	+0.5
4,040,044	+		DDA3937_RS17710	0.90	-1.1
4,040,154	+				-1.4
4,040,190	+				-0.6
4,040,190	+				-1.7
4,040,190	+				+0.1
4,040,191	-				-0.7
4,040,191	-				+0.1
4,040,191	-				+0.3
4,040,191	-				+1.1
4,040,254	+				-2.9
4,040,254	+				-2.1
4,040,254	+				+0.7
4,040,255	-				-0.6
4,040,256	+				-1.7
4,040,256	+				-1.6
4,040,256	+				+0.5
4,040,257	-				+1.6
4,040,257	-				-0.8
4,040,257	-				+0.9
4,040,257	-				+0.6
4,040,372	-		DDA3937_RS17715	0.21	+0.4
4,040,433	+		DDA3937_RS17715	0.27	-2.2
4,040,502	+		DDA3937_RS17715	0.33	+1.7
4,040,503	-		DDA3937_RS17715	0.33	+1.3
4,040,503	-		DDA3937_RS17715	0.33	+0.1
4,040,503	-		DDA3937_RS17715	0.33	+0.1
4,040,503	-		DDA3937_RS17715	0.33	+1.5
4,040,648	+		DDA3937_RS17715	0.47	-1.0
4,040,683	-				+1.6
4,040,769	+		DDA3937_RS17715	0.59	-1.9
4,040,769	+		DDA3937_RS17715	0.59	-0.6
4,040,805	+		DDA3937_RS17715	0.62	-0.5
4,040,805	+				+1.1
4,040,805	+		DDA3937_RS17715	0.62	-0.4
4,040,805	+		DDA3937_RS17715	0.62	-1.0
4,040,806	-				-0.9
4,040,806	-		DDA3937_RS17715	0.62	-1.9
4,040,806	-		DDA3937_RS17715	0.62	+0.5
4,040,806	-		DDA3937_RS17715	0.62	-1.1
4,040,806	-		DDA3937_RS17715	0.62	+0.1
4,040,885	-		DDA3937_RS17715	0.70	+0.4
4,040,885	-		DDA3937_RS17715	0.70	+0.4