Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS16925

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,844,459	+		DDA3937_RS16920	0.39	-0.5
3,844,578	+		DDA3937_RS16920	0.47	-0.4
3,844,578	+		DDA3937_RS16920	0.47	-1.3
3,844,578	+		DDA3937_RS16920	0.47	-0.4
3,844,578	+		DDA3937_RS16920	0.47	-0.5
3,844,579	-		DDA3937_RS16920	0.47	-0.1
3,844,579	-		DDA3937_RS16920	0.47	-0.9
3,844,579	-		DDA3937_RS16920	0.47	-1.5
3,844,579	-		DDA3937_RS16920	0.47	-1.4
3,844,665	+		DDA3937_RS16920	0.53	-0.1
3,844,666	-		DDA3937_RS16920	0.53	-0.1
3,844,666	-		DDA3937_RS16920	0.53	+0.9
3,844,666	-		DDA3937_RS16920	0.53	-2.1
3,844,732	+		DDA3937_RS16920	0.58	-2.4
3,844,732	+		DDA3937_RS16920	0.58	-0.5
3,844,733	-				-0.6
3,844,733	-		DDA3937_RS16920	0.58	-1.9
3,844,733	-		DDA3937_RS16920	0.58	-2.9
3,844,735	+		DDA3937_RS16920	0.58	-0.1
3,844,773	+		DDA3937_RS16920	0.61	-0.6
3,844,773	+		DDA3937_RS16920	0.61	-1.1
3,844,773	+		DDA3937_RS16920	0.61	-2.1
3,844,773	+		DDA3937_RS16920	0.61	-1.9
3,844,773	+		DDA3937_RS16920	0.61	-2.2
3,844,773	+		DDA3937_RS16920	0.61	+1.3
3,844,773	+		DDA3937_RS16920	0.61	-0.8
3,844,774	-		DDA3937_RS16920	0.61	-1.3
3,844,774	-		DDA3937_RS16920	0.61	-1.2
3,844,774	-		DDA3937_RS16920	0.61	-0.6
3,844,774	-		DDA3937_RS16920	0.61	-0.7
3,844,774	-		DDA3937_RS16920	0.61	-2.4
3,844,809	+		DDA3937_RS16920	0.63	-1.2
3,844,809	+		DDA3937_RS16920	0.63	-2.9
3,844,975	-		DDA3937_RS16920	0.75	-1.2
3,844,975	-		DDA3937_RS16920	0.75	+0.2
3,844,975	-		DDA3937_RS16920	0.75	-1.1
3,844,975	-		DDA3937_RS16920	0.75	-0.6
3,844,975	-		DDA3937_RS16920	0.75	-1.4
3,845,031	+		DDA3937_RS16920	0.79	-2.0
3,845,032	-		DDA3937_RS16920	0.79	-2.2
3,845,153	-		DDA3937_RS16920	0.87	-0.6
3,845,153	-		DDA3937_RS16920	0.87	-0.6
3,845,153	-		DDA3937_RS16920	0.87	-0.1
3,845,169	+		DDA3937_RS16920	0.89	-3.0
3,845,169	+		DDA3937_RS16920	0.89	-1.6
3,845,321	-				-0.1
3,845,321	-				-0.1
3,845,323	+				-1.0
3,845,323	+				-0.5
3,845,324	-				-0.8
3,845,324	-				-1.5
3,845,352	-				-1.8
3,845,512	-		DDA3937_RS16925	0.18	-1.9
3,845,539	+		DDA3937_RS16925	0.21	-2.1
3,845,539	+		DDA3937_RS16925	0.21	-0.9
3,845,540	-		DDA3937_RS16925	0.22	-0.6
3,845,627	+		DDA3937_RS16925	0.31	-0.5
3,845,627	+		DDA3937_RS16925	0.31	-0.1
3,845,627	+		DDA3937_RS16925	0.31	-1.2
3,845,628	-		DDA3937_RS16925	0.31	-2.6
3,845,628	-		DDA3937_RS16925	0.31	-1.1
3,845,628	-		DDA3937_RS16925	0.31	-1.2
3,845,628	-		DDA3937_RS16925	0.31	-2.2
3,845,657	+		DDA3937_RS16925	0.34	-1.2
3,845,657	+		DDA3937_RS16925	0.34	-2.5
3,845,658	-		DDA3937_RS16925	0.35	-1.6
3,845,658	-		DDA3937_RS16925	0.35	-1.2
3,845,658	-		DDA3937_RS16925	0.35	+0.2
3,845,663	+		DDA3937_RS16925	0.35	-0.9
3,845,663	+		DDA3937_RS16925	0.35	-1.2
3,845,664	-		DDA3937_RS16925	0.35	-1.1
3,845,664	-		DDA3937_RS16925	0.35	-0.9
3,845,673	+		DDA3937_RS16925	0.36	-3.7
3,845,705	-		DDA3937_RS16925	0.40	-3.5
3,845,739	+		DDA3937_RS16925	0.43	-0.1
3,845,741	+		DDA3937_RS16925	0.44	-0.4
3,845,741	+		DDA3937_RS16925	0.44	-1.1
3,845,741	+		DDA3937_RS16925	0.44	-0.1
3,845,741	+		DDA3937_RS16925	0.44	-0.9
3,845,741	+		DDA3937_RS16925	0.44	-0.1
3,845,741	+		DDA3937_RS16925	0.44	-1.0
3,845,741	+		DDA3937_RS16925	0.44	-2.1
3,845,742	-		DDA3937_RS16925	0.44	-2.2
3,845,742	-		DDA3937_RS16925	0.44	-2.8
3,845,742	-		DDA3937_RS16925	0.44	-1.6
3,845,742	-		DDA3937_RS16925	0.44	-0.6
3,845,742	-		DDA3937_RS16925	0.44	-1.1
3,845,742	-		DDA3937_RS16925	0.44	-1.1
3,845,742	-		DDA3937_RS16925	0.44	-2.6
3,845,807	+		DDA3937_RS16925	0.51	-1.1
3,845,807	+		DDA3937_RS16925	0.51	-2.1
3,845,807	+		DDA3937_RS16925	0.51	+0.6
3,845,808	-		DDA3937_RS16925	0.51	-1.9
3,845,808	-		DDA3937_RS16925	0.51	-1.4
3,845,811	+		DDA3937_RS16925	0.51	-0.3
3,845,811	+		DDA3937_RS16925	0.51	-2.6
3,845,811	+		DDA3937_RS16925	0.51	+0.4
3,845,811	+		DDA3937_RS16925	0.51	-2.4
3,845,811	+		DDA3937_RS16925	0.51	-2.5
3,845,812	-		DDA3937_RS16925	0.51	-2.2
3,845,812	-		DDA3937_RS16925	0.51	-1.4
3,845,812	-		DDA3937_RS16925	0.51	-1.4
3,845,876	+		DDA3937_RS16925	0.59	-2.0
3,845,877	-		DDA3937_RS16925	0.59	+0.1
3,845,877	-		DDA3937_RS16925	0.59	+0.4
3,845,877	-		DDA3937_RS16925	0.59	-1.8
3,845,923	-		DDA3937_RS16925	0.64	-4.0
3,845,923	-		DDA3937_RS16925	0.64	-1.8
3,846,006	-		DDA3937_RS16925	0.73	-3.3
3,846,006	-		DDA3937_RS16925	0.73	-0.8
3,846,018	+		DDA3937_RS16925	0.74	-2.6
3,846,019	-		DDA3937_RS16925	0.74	+0.4
3,846,019	-		DDA3937_RS16925	0.74	-0.8
3,846,036	-		DDA3937_RS16925	0.76	-0.8
3,846,108	+		DDA3937_RS16925	0.84	-0.8
3,846,152	+		DDA3937_RS16925	0.89	-1.4
3,846,152	+		DDA3937_RS16925	0.89	-0.6
3,846,153	-		DDA3937_RS16925	0.89	-2.1
3,846,153	-		DDA3937_RS16925	0.89	-2.4
3,846,153	-		DDA3937_RS16925	0.89	+0.8
3,846,198	+				-3.2
3,846,198	+				+0.5
3,846,198	+				-0.5
3,846,199	-				-0.8
3,846,199	-				-1.1
3,846,199	-				-1.4
3,846,199	-				-1.6
3,846,204	+				+0.9
3,846,204	+				+0.6
3,846,204	+				-2.1
3,846,204	+				-2.0
3,846,204	+				-1.6
3,846,205	-				-2.1
3,846,205	-				-1.1
3,846,205	-				-1.6
3,846,205	-				-1.5
3,846,205	-				-0.6
3,846,205	-				-0.3
3,846,205	-				-2.5
3,846,226	+				-2.0
3,846,252	+				-1.9
3,846,258	+				-0.1
3,846,264	+				-0.5
3,846,265	-				-2.1
3,846,265	-				-1.1
3,846,371	+				-1.4
3,846,371	+				-1.6
3,846,484	+		DDA3937_RS16930	0.15	-0.1
3,846,542	-		DDA3937_RS16930	0.19	-0.3
3,846,547	+		DDA3937_RS16930	0.20	-0.9
3,846,547	+		DDA3937_RS16930	0.20	-0.9
3,846,547	+		DDA3937_RS16930	0.20	-1.4
3,846,548	-		DDA3937_RS16930	0.20	-1.6
3,846,548	-		DDA3937_RS16930	0.20	-1.6
3,846,549	+		DDA3937_RS16930	0.20	-1.4
3,846,549	+		DDA3937_RS16930	0.20	-0.6
3,846,549	+		DDA3937_RS16930	0.20	-2.5
3,846,549	+		DDA3937_RS16930	0.20	-1.8
3,846,549	+		DDA3937_RS16930	0.20	-0.6
3,846,549	+		DDA3937_RS16930	0.20	-0.5
3,846,549	+		DDA3937_RS16930	0.20	-0.1
3,846,549	+		DDA3937_RS16930	0.20	-1.0
3,846,549	+		DDA3937_RS16930	0.20	-1.9
3,846,549	+		DDA3937_RS16930	0.20	-1.6
3,846,549	+		DDA3937_RS16930	0.20	-1.8
3,846,549	+		DDA3937_RS16930	0.20	-1.8
3,846,549	+		DDA3937_RS16930	0.20	-0.9
3,846,550	-		DDA3937_RS16930	0.20	-3.2
3,846,550	-		DDA3937_RS16930	0.20	-1.4
3,846,550	-		DDA3937_RS16930	0.20	-1.8
3,846,550	-		DDA3937_RS16930	0.20	-1.2
3,846,550	-		DDA3937_RS16930	0.20	-0.1
3,846,550	-		DDA3937_RS16930	0.20	-1.1
3,846,550	-		DDA3937_RS16930	0.20	-1.9
3,846,550	-		DDA3937_RS16930	0.20	-1.6
3,846,550	-		DDA3937_RS16930	0.20	-1.2
3,846,550	-		DDA3937_RS16930	0.20	-1.1
3,846,550	-		DDA3937_RS16930	0.20	-0.6
3,846,550	-		DDA3937_RS16930	0.20	+0.9
3,846,550	-		DDA3937_RS16930	0.20	-1.2
3,846,550	-		DDA3937_RS16930	0.20	-1.6
3,846,553	+		DDA3937_RS16930	0.20	-0.5
3,846,554	-		DDA3937_RS16930	0.20	-0.6
3,846,633	-		DDA3937_RS16930	0.26	+0.4
3,846,678	+		DDA3937_RS16930	0.29	-0.6
3,846,954	+		DDA3937_RS16930	0.48	+0.6
3,846,955	-		DDA3937_RS16930	0.48	+0.9
3,847,054	+		DDA3937_RS16930	0.55	-1.1
3,847,055	-		DDA3937_RS16930	0.55	-1.9
3,847,147	+		DDA3937_RS16930	0.62	-1.2
3,847,147	+		DDA3937_RS16930	0.62	-0.6
3,847,148	-		DDA3937_RS16930	0.62	-1.4