Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS15270

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,502,833	+		DDA3937_RS15265	0.71	-1.5
3,502,833	+		DDA3937_RS15265	0.71	-1.3
3,502,833	+		DDA3937_RS15265	0.71	-1.5
3,502,869	+		DDA3937_RS15265	0.72	-2.8
3,502,869	+		DDA3937_RS15265	0.72	-0.6
3,502,870	-		DDA3937_RS15265	0.73	-1.8
3,502,870	-		DDA3937_RS15265	0.73	-1.6
3,502,870	-		DDA3937_RS15265	0.73	+0.1
3,503,074	+		DDA3937_RS15265	0.79	-0.8
3,503,074	+				+0.8
3,503,075	-		DDA3937_RS15265	0.79	-1.0
3,503,151	-		DDA3937_RS15265	0.81	-1.2
3,503,241	+		DDA3937_RS15265	0.84	-1.8
3,503,241	+		DDA3937_RS15265	0.84	-0.6
3,503,241	+		DDA3937_RS15265	0.84	-1.5
3,503,241	+		DDA3937_RS15265	0.84	+0.4
3,503,241	+		DDA3937_RS15265	0.84	-1.4
3,503,241	+		DDA3937_RS15265	0.84	+0.2
3,503,241	+		DDA3937_RS15265	0.84	-2.2
3,503,241	+		DDA3937_RS15265	0.84	+0.2
3,503,241	+		DDA3937_RS15265	0.84	-1.4
3,503,241	+		DDA3937_RS15265	0.84	-2.5
3,503,241	+		DDA3937_RS15265	0.84	-1.9
3,503,241	+		DDA3937_RS15265	0.84	-0.5
3,503,241	+				-0.8
3,503,242	-		DDA3937_RS15265	0.84	-1.8
3,503,242	-		DDA3937_RS15265	0.84	-1.8
3,503,242	-				-1.2
3,503,242	-		DDA3937_RS15265	0.84	-1.1
3,503,242	-		DDA3937_RS15265	0.84	-1.5
3,503,242	-		DDA3937_RS15265	0.84	+0.6
3,503,242	-		DDA3937_RS15265	0.84	+0.2
3,503,242	-		DDA3937_RS15265	0.84	-1.5
3,503,242	-		DDA3937_RS15265	0.84	-1.4
3,503,242	-		DDA3937_RS15265	0.84	-0.5
3,503,242	-		DDA3937_RS15265	0.84	-0.3
3,503,242	-		DDA3937_RS15265	0.84	-2.4
3,503,242	-		DDA3937_RS15265	0.84	-1.4
3,503,243	+		DDA3937_RS15265	0.84	-1.0
3,503,243	+		DDA3937_RS15265	0.84	-1.5
3,503,244	-		DDA3937_RS15265	0.84	+0.2
3,503,244	-		DDA3937_RS15265	0.84	-2.9
3,503,263	-		DDA3937_RS15265	0.85	-2.2
3,503,288	+		DDA3937_RS15265	0.86	+0.4
3,503,470	-				-1.2
3,503,481	+				-1.2
3,503,481	+				+0.1
3,503,481	+				+0.8
3,503,482	-				+1.8
3,503,584	+				-0.4
3,503,606	+				-1.2
3,503,606	+				-0.4
3,503,607	-				-0.2
3,503,635	+				-0.7
3,503,635	+				-3.1
3,503,636	-				-2.1
3,503,636	-				-0.5
3,503,664	+				-1.2
3,503,664	+				-1.2
3,503,665	-				-0.2
3,503,665	-				-0.8
3,503,665	-				-1.5
3,503,806	-				-1.4
3,503,853	-				-1.2
3,504,110	+		DDA3937_RS15270	0.12	-2.1
3,504,124	-		DDA3937_RS15270	0.13	-0.9
3,504,170	-		DDA3937_RS15270	0.14	-2.1
3,504,173	+		DDA3937_RS15270	0.14	-2.4
3,504,173	+		DDA3937_RS15270	0.14	-0.8
3,504,174	-		DDA3937_RS15270	0.14	+0.4
3,504,191	+		DDA3937_RS15270	0.15	-1.2
3,504,191	+		DDA3937_RS15270	0.15	-2.5
3,504,192	-		DDA3937_RS15270	0.15	-0.8
3,504,192	-		DDA3937_RS15270	0.15	-2.9
3,504,197	+		DDA3937_RS15270	0.15	-2.2
3,504,197	+		DDA3937_RS15270	0.15	-1.8
3,504,198	-		DDA3937_RS15270	0.15	+0.7
3,504,266	-		DDA3937_RS15270	0.17	+0.1
3,504,266	-		DDA3937_RS15270	0.17	-2.2
3,504,408	-				-1.2
3,504,470	+		DDA3937_RS15270	0.24	-1.6
3,504,470	+		DDA3937_RS15270	0.24	-1.3
3,504,471	-		DDA3937_RS15270	0.24	-2.9
3,504,471	-		DDA3937_RS15270	0.24	-2.0
3,504,471	-		DDA3937_RS15270	0.24	+0.3
3,504,471	-		DDA3937_RS15270	0.24	+0.2
3,504,648	+		DDA3937_RS15270	0.30	-2.4
3,504,648	+		DDA3937_RS15270	0.30	-0.5
3,504,648	+		DDA3937_RS15270	0.30	-0.8
3,504,649	-		DDA3937_RS15270	0.30	-1.3
3,504,649	-		DDA3937_RS15270	0.30	-1.4
3,504,655	+		DDA3937_RS15270	0.30	+0.2
3,504,656	-		DDA3937_RS15270	0.30	-0.6
3,504,656	-		DDA3937_RS15270	0.30	-1.6
3,504,860	+		DDA3937_RS15270	0.37	-0.8
3,504,860	+		DDA3937_RS15270	0.37	-0.2
3,504,860	+		DDA3937_RS15270	0.37	+0.8
3,504,860	+		DDA3937_RS15270	0.37	-2.4
3,504,860	+		DDA3937_RS15270	0.37	-2.8
3,504,860	+		DDA3937_RS15270	0.37	-1.1
3,504,861	-				+0.5
3,504,861	-		DDA3937_RS15270	0.37	-0.6
3,504,861	-		DDA3937_RS15270	0.37	-0.9
3,504,861	-		DDA3937_RS15270	0.37	-1.5
3,504,861	-		DDA3937_RS15270	0.37	-3.1
3,505,067	-		DDA3937_RS15270	0.43	-1.0
3,505,345	+		DDA3937_RS15270	0.52	-2.4
3,505,358	+		DDA3937_RS15270	0.53	+0.0
3,505,358	+		DDA3937_RS15270	0.53	-1.1
3,505,358	+		DDA3937_RS15270	0.53	+0.8
3,505,358	+				+0.8
3,505,358	+		DDA3937_RS15270	0.53	-1.2
3,505,359	-		DDA3937_RS15270	0.53	+0.8
3,505,359	-		DDA3937_RS15270	0.53	-0.6
3,505,359	-		DDA3937_RS15270	0.53	-0.5
3,505,359	-		DDA3937_RS15270	0.53	-1.2
3,505,359	-		DDA3937_RS15270	0.53	-0.5
3,505,360	+		DDA3937_RS15270	0.53	-0.6
3,505,360	+		DDA3937_RS15270	0.53	-0.9
3,505,361	-		DDA3937_RS15270	0.53	-1.5
3,505,655	+		DDA3937_RS15270	0.62	-1.0
3,505,655	+		DDA3937_RS15270	0.62	-1.5
3,505,656	-		DDA3937_RS15270	0.62	-1.2
3,505,656	-		DDA3937_RS15270	0.62	-1.7
3,505,848	+		DDA3937_RS15270	0.69	-1.3
3,505,848	+		DDA3937_RS15270	0.69	-1.0
3,505,849	-		DDA3937_RS15270	0.69	-1.5
3,505,849	-		DDA3937_RS15270	0.69	+2.8
3,505,849	-		DDA3937_RS15270	0.69	-1.5
3,505,850	+		DDA3937_RS15270	0.69	+1.8
3,505,851	-				-0.2
3,505,851	-		DDA3937_RS15270	0.69	-2.0
3,505,939	+		DDA3937_RS15270	0.72	+0.8
3,505,939	+		DDA3937_RS15270	0.72	+0.5
3,505,940	-		DDA3937_RS15270	0.72	-1.1
3,505,940	-		DDA3937_RS15270	0.72	-1.4
3,505,946	+		DDA3937_RS15270	0.72	-2.0
3,505,946	+		DDA3937_RS15270	0.72	-0.2
3,505,947	-		DDA3937_RS15270	0.72	-0.5
3,505,947	-		DDA3937_RS15270	0.72	+1.4
3,505,964	+		DDA3937_RS15270	0.72	+0.5
3,505,965	-		DDA3937_RS15270	0.72	+0.2
3,505,965	-		DDA3937_RS15270	0.72	-1.3
3,505,965	-		DDA3937_RS15270	0.72	-0.2
3,506,318	+		DDA3937_RS15270	0.84	-2.4
3,506,319	-		DDA3937_RS15270	0.84	-0.9
3,506,319	-		DDA3937_RS15270	0.84	+0.8
3,506,319	-		DDA3937_RS15270	0.84	-2.9
3,506,319	-				+1.1
3,506,319	-		DDA3937_RS15270	0.84	-0.5
3,506,339	+		DDA3937_RS15270	0.84	+0.2
3,506,339	+				+1.8
3,506,340	-		DDA3937_RS15270	0.84	-1.2
3,506,340	-		DDA3937_RS15270	0.84	+0.2
3,506,340	-		DDA3937_RS15270	0.84	-0.2
3,506,340	-		DDA3937_RS15270	0.84	-1.3
3,506,723	+				-0.8
3,506,723	+				-0.5
3,506,723	+				-0.4
3,506,723	+				-0.2
3,506,724	-				-2.2
3,506,724	-				-0.8
3,506,724	-				-2.2
3,506,724	-				-1.9
3,506,741	+				-0.8
3,506,741	+				-0.5
3,506,741	+				-1.4
3,506,742	-				-0.2
3,506,742	-				-0.2
3,506,742	-				-3.5
3,506,742	-				+0.8
3,506,800	+				+0.5
3,506,834	-				+0.3
3,506,839	+				+1.5
3,506,842	+				+0.3
3,506,842	+				+0.4
3,506,843	-				+0.8
3,506,896	-				-0.4
3,507,065	+		DDA3937_RS15275	0.11	+1.1
3,507,065	+		DDA3937_RS15275	0.11	-0.2
3,507,065	+		DDA3937_RS15275	0.11	+0.5
3,507,065	+		DDA3937_RS15275	0.11	+1.2
3,507,065	+		DDA3937_RS15275	0.11	+0.2
3,507,065	+		DDA3937_RS15275	0.11	-0.2
3,507,065	+		DDA3937_RS15275	0.11	-0.1
3,507,069	+		DDA3937_RS15275	0.12	-1.8
3,507,069	+		DDA3937_RS15275	0.12	-0.8
3,507,069	+		DDA3937_RS15275	0.12	-0.4
3,507,070	-		DDA3937_RS15275	0.12	-1.0
3,507,070	-		DDA3937_RS15275	0.12	-1.2
3,507,070	-		DDA3937_RS15275	0.12	-2.4
3,507,070	-		DDA3937_RS15275	0.12	-1.3
3,507,070	-		DDA3937_RS15275	0.12	-0.8
3,507,257	-		DDA3937_RS15275	0.25	+0.2
3,507,300	-		DDA3937_RS15275	0.28	+1.1
3,507,339	+		DDA3937_RS15275	0.31	-1.0
3,507,340	-		DDA3937_RS15275	0.31	-1.5
3,507,383	+		DDA3937_RS15275	0.34	-1.5
3,507,694	+		DDA3937_RS15275	0.56	+1.2
3,507,694	+		DDA3937_RS15275	0.56	+1.6
3,507,739	+		DDA3937_RS15275	0.59	-2.4
3,507,786	-		DDA3937_RS15275	0.63	+0.9