Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10645

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,395,033	+		DDA3937_RS10635	0.79	+0.1
2,395,034	-		DDA3937_RS10635	0.79	-1.2
2,395,083	+				+1.0
2,395,095	+		DDA3937_RS10635	0.86	-1.5
2,395,120	+		DDA3937_RS10635	0.88	-1.4
2,395,145	+				-1.1
2,395,250	-				-0.5
2,395,250	-				-0.2
2,395,271	-				-0.7
2,395,300	+				+0.4
2,395,300	+				+0.3
2,395,311	+				-1.5
2,395,312	-				+0.5
2,395,315	-				-1.2
2,395,320	+				-1.2
2,395,433	+		DDA3937_RS10640	0.19	-2.4
2,395,465	+		DDA3937_RS10640	0.26	-0.9
2,395,493	+		DDA3937_RS10640	0.32	-2.4
2,395,501	-		DDA3937_RS10640	0.34	+0.1
2,395,610	-		DDA3937_RS10640	0.57	-0.5
2,395,615	+		DDA3937_RS10640	0.58	-0.4
2,395,616	-		DDA3937_RS10640	0.58	-0.4
2,395,616	-		DDA3937_RS10640	0.58	-0.4
2,395,638	+		DDA3937_RS10640	0.63	-1.1
2,395,638	+		DDA3937_RS10640	0.63	-0.4
2,395,638	+		DDA3937_RS10640	0.63	-0.6
2,395,638	+		DDA3937_RS10640	0.63	-2.6
2,395,638	+		DDA3937_RS10640	0.63	-1.6
2,395,638	+		DDA3937_RS10640	0.63	+1.6
2,395,638	+		DDA3937_RS10640	0.63	+1.0
2,395,639	-		DDA3937_RS10640	0.63	-0.3
2,395,639	-		DDA3937_RS10640	0.63	-2.6
2,395,662	+		DDA3937_RS10640	0.68	-0.2
2,395,662	+		DDA3937_RS10640	0.68	-1.0
2,395,663	-		DDA3937_RS10640	0.69	-1.6
2,395,663	-		DDA3937_RS10640	0.69	-2.3
2,395,663	-		DDA3937_RS10640	0.69	-0.8
2,395,663	-		DDA3937_RS10640	0.69	+1.2
2,395,685	+		DDA3937_RS10640	0.73	-0.8
2,395,718	+				-1.6
2,395,740	-		DDA3937_RS10640	0.85	+1.6
2,395,757	+		DDA3937_RS10640	0.89	-0.3
2,395,792	+				-0.3
2,395,792	+				-0.1
2,395,792	+				-0.7
2,395,793	-				-1.4
2,395,793	-				-1.1
2,395,828	+				+0.1
2,395,828	+				+1.6
2,395,828	+				+0.2
2,395,828	+				+1.3
2,395,828	+				+0.2
2,395,828	+				-0.2
2,395,835	+				-0.7
2,395,857	-				-0.6
2,395,868	+				-0.2
2,395,868	+				-0.6
2,395,965	-				+0.8
2,396,104	+				-2.4
2,396,158	-				-1.1
2,396,458	+		DDA3937_RS10645	0.29	-0.6
2,396,459	-		DDA3937_RS10645	0.29	-0.7
2,396,537	-		DDA3937_RS10645	0.34	-1.6
2,396,537	-		DDA3937_RS10645	0.34	+1.2
2,396,537	-		DDA3937_RS10645	0.34	-1.5
2,396,568	+		DDA3937_RS10645	0.36	-0.8
2,396,902	+		DDA3937_RS10645	0.58	-0.6
2,397,002	+		DDA3937_RS10645	0.64	-1.9
2,397,114	+		DDA3937_RS10645	0.71	-0.0
2,397,115	-		DDA3937_RS10645	0.71	-0.6
2,397,115	-		DDA3937_RS10645	0.71	-2.6
2,397,122	-		DDA3937_RS10645	0.72	-1.4
2,397,206	+		DDA3937_RS10645	0.77	-1.9
2,397,206	+		DDA3937_RS10645	0.77	-0.6
2,397,207	-		DDA3937_RS10645	0.77	-1.1
2,397,207	-				-0.2
2,397,207	-		DDA3937_RS10645	0.77	-1.2
2,397,381	+		DDA3937_RS10645	0.88	-1.2
2,397,473	+				-1.0
2,397,473	+				-0.3
2,397,473	+				+0.0
2,397,473	+				-1.4
2,397,565	+				-2.1
2,397,565	+				-0.8
2,397,565	+				-1.4
2,397,565	+				-2.6
2,397,565	+				-0.6
2,397,565	+				+1.4
2,397,566	-				-0.5
2,397,566	-				-0.6
2,397,566	-				-2.4
2,397,566	-				+0.4
2,397,567	+				+0.8
2,397,567	+				-2.2
2,397,567	+				+0.2
2,397,568	-				-1.2
2,397,568	-				-0.2
2,397,569	+				-0.3
2,397,569	+				-0.2
2,397,569	+				+0.1
2,397,570	-				+3.2
2,397,570	-				-1.4
2,397,570	-				-0.6
2,397,570	-				-0.6
2,397,570	-				-1.1
2,397,612	+				-1.4
2,397,612	+				-0.3
2,397,613	-				-1.4
2,397,613	-				-1.6
2,397,613	-				+0.6
2,397,613	-				+0.7
2,397,616	+				-2.3
2,397,616	+				-2.4
2,397,616	+				+1.7
2,397,616	+				-0.6
2,397,616	+				+1.2
2,397,616	+				-1.9
2,397,616	+				+0.8
2,397,616	+				-2.6
2,397,617	-				+1.0
2,397,617	-				+1.2
2,397,617	-				-0.6
2,397,617	-				+1.0
2,397,622	+				-1.5
2,397,622	+				-1.9
2,397,622	+				-1.9
2,397,622	+				-0.6
2,397,622	+				+0.1
2,397,622	+				+0.8
2,397,622	+				-2.6
2,397,622	+				+1.0
2,397,622	+				+0.9
2,397,622	+				-1.7
2,397,622	+				+1.2
2,397,622	+				-0.8
2,397,622	+				-0.6
2,397,622	+				+0.3
2,397,623	-				-0.6
2,397,623	-				+0.6
2,397,623	-				+0.2
2,397,623	-				-0.9
2,397,623	-				-1.6
2,397,623	-				-0.3
2,397,623	-				+0.4
2,397,624	+				-0.2
2,397,624	+				-2.4
2,397,624	+				+0.7
2,397,625	-				+1.6
2,397,625	-				+0.3
2,397,625	-				-1.4
2,397,625	-				-0.3
2,397,625	-				-0.1
2,397,631	-				-2.4
2,397,643	+				+1.0
2,397,644	-				+0.5
2,397,780	-		DDA3937_RS10650	0.13	+1.6
2,397,821	+		DDA3937_RS10650	0.17	+1.3
2,397,826	+		DDA3937_RS10650	0.17	-0.0
2,397,826	+		DDA3937_RS10650	0.17	-0.6
2,397,827	-		DDA3937_RS10650	0.17	+1.1
2,397,827	-		DDA3937_RS10650	0.17	-1.0
2,397,962	+		DDA3937_RS10650	0.29	-0.8
2,397,962	+		DDA3937_RS10650	0.29	+1.1
2,397,962	+		DDA3937_RS10650	0.29	-0.6
2,397,962	+		DDA3937_RS10650	0.29	-0.3
2,397,962	+		DDA3937_RS10650	0.29	+0.8
2,397,962	+		DDA3937_RS10650	0.29	+2.3
2,397,963	-		DDA3937_RS10650	0.29	+2.8
2,397,963	-		DDA3937_RS10650	0.29	+0.2
2,397,963	-		DDA3937_RS10650	0.29	+0.6
2,397,963	-		DDA3937_RS10650	0.29	+0.2
2,397,963	-		DDA3937_RS10650	0.29	+0.3
2,397,963	-		DDA3937_RS10650	0.29	+1.0
2,397,964	+		DDA3937_RS10650	0.29	+1.6
2,397,964	+		DDA3937_RS10650	0.29	+0.4
2,397,964	+		DDA3937_RS10650	0.29	+0.8
2,397,964	+		DDA3937_RS10650	0.29	-0.3
2,397,964	+		DDA3937_RS10650	0.29	+0.9
2,397,964	+		DDA3937_RS10650	0.29	+1.1
2,397,964	+		DDA3937_RS10650	0.29	-0.0
2,397,964	+		DDA3937_RS10650	0.29	+1.8
2,397,965	-		DDA3937_RS10650	0.29	+2.0
2,397,965	-		DDA3937_RS10650	0.29	+0.1
2,397,965	-		DDA3937_RS10650	0.29	+0.4
2,397,965	-		DDA3937_RS10650	0.29	+0.5
2,397,965	-		DDA3937_RS10650	0.29	+1.0
2,397,965	-		DDA3937_RS10650	0.29	-0.6
2,398,037	-		DDA3937_RS10650	0.35	+0.7
2,398,057	+		DDA3937_RS10650	0.37	-2.4
2,398,136	-		DDA3937_RS10650	0.43	+0.8
2,398,148	+		DDA3937_RS10650	0.44	-0.3
2,398,381	+		DDA3937_RS10650	0.64	+0.5
2,398,429	+		DDA3937_RS10650	0.68	+0.9
2,398,430	-		DDA3937_RS10650	0.68	+1.7
2,398,430	-		DDA3937_RS10650	0.68	-3.4
2,398,430	-				-0.0