Experiment: M9+glycerol
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DDA3937_RS03145 and DDA3937_RS03150 are separated by 71 nucleotides DDA3937_RS03150 and DDA3937_RS03160 are separated by 628 nucleotides
DDA3937_RS03145: DDA3937_RS03145 - phosphopentomutase, at 693,265 to 694,488
_RS03145
DDA3937_RS03150: DDA3937_RS03150 - purine-nucleoside phosphorylase, at 694,560 to 695,285
_RS03150
DDA3937_RS03160: DDA3937_RS03160 - VOC family protein, at 695,914 to 696,468
_RS03160
Position (kb) 694
695
696 Strain fitness (log2 ratio) -2
-1
0
1
2 at 693.611 kb on - strand, within DDA3937_RS03145 at 693.835 kb on + strand, within DDA3937_RS03145 at 694.054 kb on + strand, within DDA3937_RS03145 at 694.089 kb on + strand at 694.153 kb on - strand, within DDA3937_RS03145 at 694.516 kb on - strand at 694.540 kb on - strand at 694.565 kb on + strand at 694.565 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.574 kb on + strand at 694.575 kb on - strand at 694.575 kb on - strand at 694.575 kb on - strand at 694.575 kb on - strand at 694.575 kb on - strand at 694.641 kb on + strand, within DDA3937_RS03150 at 694.641 kb on + strand, within DDA3937_RS03150 at 694.642 kb on - strand, within DDA3937_RS03150 at 694.642 kb on - strand, within DDA3937_RS03150 at 694.694 kb on + strand, within DDA3937_RS03150 at 694.716 kb on + strand, within DDA3937_RS03150 at 694.716 kb on + strand at 694.716 kb on + strand, within DDA3937_RS03150 at 694.717 kb on - strand, within DDA3937_RS03150 at 694.757 kb on + strand, within DDA3937_RS03150 at 694.776 kb on + strand, within DDA3937_RS03150 at 694.776 kb on + strand, within DDA3937_RS03150 at 694.923 kb on - strand, within DDA3937_RS03150 at 694.923 kb on - strand, within DDA3937_RS03150 at 695.040 kb on + strand, within DDA3937_RS03150 at 695.040 kb on + strand, within DDA3937_RS03150 at 695.040 kb on + strand, within DDA3937_RS03150 at 695.040 kb on + strand, within DDA3937_RS03150 at 695.041 kb on - strand, within DDA3937_RS03150 at 695.041 kb on - strand, within DDA3937_RS03150 at 695.118 kb on + strand, within DDA3937_RS03150 at 695.118 kb on + strand, within DDA3937_RS03150 at 695.125 kb on + strand, within DDA3937_RS03150 at 695.126 kb on - strand, within DDA3937_RS03150 at 695.270 kb on + strand at 695.296 kb on - strand at 695.296 kb on - strand at 695.298 kb on + strand at 695.298 kb on + strand at 695.298 kb on + strand at 695.298 kb on + strand at 695.298 kb on + strand at 695.298 kb on + strand at 695.299 kb on - strand at 695.299 kb on - strand at 695.299 kb on - strand at 695.306 kb on + strand at 695.353 kb on - strand at 695.353 kb on - strand at 695.353 kb on - strand at 695.353 kb on - strand at 695.353 kb on - strand at 695.357 kb on - strand at 695.663 kb on + strand at 695.663 kb on + strand at 695.663 kb on + strand at 695.663 kb on + strand at 695.718 kb on + strand at 695.718 kb on + strand at 695.719 kb on - strand at 695.719 kb on - strand at 695.788 kb on + strand at 695.788 kb on + strand at 695.798 kb on + strand at 695.875 kb on + strand at 695.876 kb on - strand at 696.051 kb on - strand, within DDA3937_RS03160 at 696.061 kb on + strand, within DDA3937_RS03160 at 696.061 kb on + strand, within DDA3937_RS03160 at 696.062 kb on - strand, within DDA3937_RS03160 at 696.062 kb on - strand, within DDA3937_RS03160 at 696.143 kb on + strand, within DDA3937_RS03160 at 696.143 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9+glycerol remove 693,611 - DDA3937_RS03145 0.28 +1.8 693,835 + DDA3937_RS03145 0.47 -1.3 694,054 + DDA3937_RS03145 0.64 +0.6 694,089 + -0.6 694,153 - DDA3937_RS03145 0.73 -1.0 694,516 - -1.3 694,540 - +1.0 694,565 + +2.0 694,565 + -0.8 694,574 + +0.6 694,574 + -0.6 694,574 + -0.3 694,574 + -2.3 694,574 + -0.3 694,574 + -1.0 694,574 + -1.8 694,575 - -0.5 694,575 - -2.4 694,575 - +1.3 694,575 - +0.3 694,575 - +0.2 694,641 + DDA3937_RS03150 0.11 +2.6 694,641 + DDA3937_RS03150 0.11 -0.4 694,642 - DDA3937_RS03150 0.11 -1.3 694,642 - DDA3937_RS03150 0.11 -0.6 694,694 + DDA3937_RS03150 0.18 -1.7 694,716 + DDA3937_RS03150 0.21 +0.7 694,716 + -1.3 694,716 + DDA3937_RS03150 0.21 +0.0 694,717 - DDA3937_RS03150 0.22 -1.0 694,757 + DDA3937_RS03150 0.27 -2.0 694,776 + DDA3937_RS03150 0.30 +0.4 694,776 + DDA3937_RS03150 0.30 +0.0 694,923 - DDA3937_RS03150 0.50 -0.7 694,923 - DDA3937_RS03150 0.50 +0.0 695,040 + DDA3937_RS03150 0.66 -0.2 695,040 + DDA3937_RS03150 0.66 +0.0 695,040 + DDA3937_RS03150 0.66 +0.3 695,040 + DDA3937_RS03150 0.66 -0.8 695,041 - DDA3937_RS03150 0.66 -0.6 695,041 - DDA3937_RS03150 0.66 -1.1 695,118 + DDA3937_RS03150 0.77 -0.8 695,118 + DDA3937_RS03150 0.77 +0.5 695,125 + DDA3937_RS03150 0.78 -0.2 695,126 - DDA3937_RS03150 0.78 -0.5 695,270 + -1.6 695,296 - -1.9 695,296 - +2.6 695,298 + +1.4 695,298 + -1.6 695,298 + +0.0 695,298 + +1.4 695,298 + -1.6 695,298 + -0.2 695,299 - -1.0 695,299 - -0.8 695,299 - -0.2 695,306 + -0.1 695,353 - -0.8 695,353 - -0.3 695,353 - +1.6 695,353 - -0.7 695,353 - -1.6 695,357 - +0.0 695,663 + +2.0 695,663 + -0.4 695,663 + -1.6 695,663 + -1.3 695,718 + +1.0 695,718 + -0.3 695,719 - -0.7 695,719 - -0.1 695,788 + -0.4 695,788 + +0.3 695,798 + +0.5 695,875 + -0.7 695,876 - -0.4 696,051 - DDA3937_RS03160 0.25 -1.4 696,061 + DDA3937_RS03160 0.26 -1.8 696,061 + DDA3937_RS03160 0.26 -1.3 696,062 - DDA3937_RS03160 0.27 -0.4 696,062 - DDA3937_RS03160 0.27 -1.4 696,143 + DDA3937_RS03160 0.41 -0.7 696,143 + +0.0
Or see this region's nucleotide sequence