Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS19975

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
4,548,286	+				+1.2
4,548,286	+				+0.9
4,548,308	+				+1.4
4,548,309	-				+1.2
4,548,351	+		DDA3937_RS19970	0.11	+0.1
4,548,352	-		DDA3937_RS19970	0.11	-1.3
4,548,352	-		DDA3937_RS19970	0.11	-0.8
4,548,639	-		DDA3937_RS19970	0.41	+0.1
4,548,688	+		DDA3937_RS19970	0.46	-0.5
4,548,689	-		DDA3937_RS19970	0.46	+0.5
4,548,813	-		DDA3937_RS19970	0.58	-1.0
4,548,909	+		DDA3937_RS19970	0.68	-0.5
4,548,909	+		DDA3937_RS19970	0.68	-0.1
4,548,909	+		DDA3937_RS19970	0.68	-2.4
4,548,909	+		DDA3937_RS19970	0.68	+0.7
4,548,910	-		DDA3937_RS19970	0.68	-1.2
4,548,910	-		DDA3937_RS19970	0.68	-0.1
4,548,910	-		DDA3937_RS19970	0.68	-0.0
4,548,910	-		DDA3937_RS19970	0.68	-0.1
4,548,910	-		DDA3937_RS19970	0.68	-0.3
4,548,911	+		DDA3937_RS19970	0.68	-0.5
4,548,911	+		DDA3937_RS19970	0.68	+0.9
4,548,911	+		DDA3937_RS19970	0.68	+1.1
4,548,911	+		DDA3937_RS19970	0.68	+0.1
4,548,911	+		DDA3937_RS19970	0.68	-1.7
4,548,911	+		DDA3937_RS19970	0.68	+0.5
4,548,911	+		DDA3937_RS19970	0.68	+2.2
4,548,911	+		DDA3937_RS19970	0.68	-1.8
4,548,912	-		DDA3937_RS19970	0.69	-1.1
4,548,912	-		DDA3937_RS19970	0.69	+0.2
4,548,912	-				+2.5
4,548,912	-		DDA3937_RS19970	0.69	+1.0
4,548,912	-		DDA3937_RS19970	0.69	-0.5
4,548,912	-		DDA3937_RS19970	0.69	+0.0
4,548,912	-		DDA3937_RS19970	0.69	-0.0
4,548,912	-		DDA3937_RS19970	0.69	+1.4
4,548,912	-		DDA3937_RS19970	0.69	+0.0
4,548,912	-		DDA3937_RS19970	0.69	+0.5
4,549,024	+		DDA3937_RS19970	0.80	-0.8
4,549,029	+		DDA3937_RS19970	0.80	-0.1
4,549,029	+		DDA3937_RS19970	0.80	+2.9
4,549,030	-		DDA3937_RS19970	0.81	-0.2
4,549,030	-		DDA3937_RS19970	0.81	+1.1
4,549,057	+		DDA3937_RS19970	0.83	+0.0
4,549,057	+		DDA3937_RS19970	0.83	+1.2
4,549,057	+		DDA3937_RS19970	0.83	-0.0
4,549,072	+		DDA3937_RS19970	0.85	+0.4
4,549,073	-		DDA3937_RS19970	0.85	-1.4
4,549,073	-		DDA3937_RS19970	0.85	-0.3
4,549,128	-				-0.7
4,549,208	+				-0.3
4,549,208	+				-1.7
4,549,208	+				+0.3
4,549,209	-				+0.4
4,549,242	+				-1.4
4,549,243	-				-0.6
4,549,243	-				-0.1
4,549,243	-				-0.1
4,549,243	-				-0.7
4,549,301	-				-0.7
4,549,301	-				-0.4
4,549,301	-				+1.2
4,549,301	-				-0.2
4,549,312	+				+0.9
4,549,351	-				-0.0
4,549,409	+		DDA3937_RS19975	0.13	-0.1
4,549,409	+		DDA3937_RS19975	0.13	+0.6
4,549,410	-		DDA3937_RS19975	0.14	+0.0
4,549,478	+		DDA3937_RS19975	0.21	+0.6
4,549,478	+		DDA3937_RS19975	0.21	-1.9
4,549,478	+		DDA3937_RS19975	0.21	-0.6
4,549,478	+		DDA3937_RS19975	0.21	+0.8
4,549,479	-		DDA3937_RS19975	0.21	-0.7
4,549,479	-		DDA3937_RS19975	0.21	-0.4
4,549,479	-		DDA3937_RS19975	0.21	-0.0
4,549,479	-		DDA3937_RS19975	0.21	+0.8
4,549,479	-		DDA3937_RS19975	0.21	-1.4
4,549,479	-		DDA3937_RS19975	0.21	+0.6
4,549,479	-		DDA3937_RS19975	0.21	-1.5
4,549,542	+		DDA3937_RS19975	0.28	-1.6
4,549,543	-		DDA3937_RS19975	0.28	-1.8
4,549,545	+		DDA3937_RS19975	0.28	+0.1
4,549,546	-		DDA3937_RS19975	0.28	-0.2
4,549,588	-		DDA3937_RS19975	0.32	-0.4
4,549,710	+		DDA3937_RS19975	0.45	-0.4
4,549,710	+		DDA3937_RS19975	0.45	-0.6
4,549,711	-		DDA3937_RS19975	0.46	-0.9
4,549,720	-		DDA3937_RS19975	0.47	-0.9
4,549,766	-		DDA3937_RS19975	0.51	+0.2
4,549,766	-		DDA3937_RS19975	0.51	-1.1
4,549,799	+		DDA3937_RS19975	0.55	+2.5
4,549,799	+		DDA3937_RS19975	0.55	-2.0
4,549,800	-		DDA3937_RS19975	0.55	+0.4
4,549,800	-		DDA3937_RS19975	0.55	-0.7
4,549,800	-		DDA3937_RS19975	0.55	-1.3
4,549,800	-		DDA3937_RS19975	0.55	-0.0
4,549,800	-		DDA3937_RS19975	0.55	+0.2
4,549,800	-		DDA3937_RS19975	0.55	+0.5
4,549,800	-		DDA3937_RS19975	0.55	+0.3
4,549,868	+		DDA3937_RS19975	0.62	-0.2
4,549,868	+		DDA3937_RS19975	0.62	+1.5
4,549,868	+		DDA3937_RS19975	0.62	-0.1
4,549,868	+		DDA3937_RS19975	0.62	-1.8
4,549,868	+		DDA3937_RS19975	0.62	-0.5
4,549,868	+		DDA3937_RS19975	0.62	+0.1
4,549,868	+		DDA3937_RS19975	0.62	+0.0
4,549,869	-		DDA3937_RS19975	0.62	-1.9
4,549,869	-		DDA3937_RS19975	0.62	-0.9
4,549,869	-		DDA3937_RS19975	0.62	-0.6
4,549,869	-		DDA3937_RS19975	0.62	-1.3
4,549,869	-		DDA3937_RS19975	0.62	-1.1
4,549,869	-		DDA3937_RS19975	0.62	+0.9
4,549,869	-		DDA3937_RS19975	0.62	+0.9
4,549,870	+		DDA3937_RS19975	0.63	+0.4
4,549,871	-		DDA3937_RS19975	0.63	+0.9
4,549,871	-		DDA3937_RS19975	0.63	+0.2
4,549,871	-		DDA3937_RS19975	0.63	+0.8
4,549,873	+		DDA3937_RS19975	0.63	+0.3
4,549,873	+		DDA3937_RS19975	0.63	-0.8
4,549,873	+		DDA3937_RS19975	0.63	-0.6
4,549,873	+		DDA3937_RS19975	0.63	-0.1
4,549,873	+		DDA3937_RS19975	0.63	+0.2
4,549,873	+		DDA3937_RS19975	0.63	+0.0
4,549,873	+		DDA3937_RS19975	0.63	-0.4
4,549,873	+		DDA3937_RS19975	0.63	-1.2
4,549,873	+		DDA3937_RS19975	0.63	+0.6
4,549,873	+		DDA3937_RS19975	0.63	+0.3
4,549,873	+		DDA3937_RS19975	0.63	+0.4
4,549,873	+		DDA3937_RS19975	0.63	-1.5
4,549,873	+		DDA3937_RS19975	0.63	-0.1
4,549,873	+		DDA3937_RS19975	0.63	-0.8
4,549,873	+				+0.2
4,549,874	-		DDA3937_RS19975	0.63	-0.2
4,549,874	-		DDA3937_RS19975	0.63	-2.8
4,549,874	-		DDA3937_RS19975	0.63	-1.4
4,549,874	-		DDA3937_RS19975	0.63	+2.1
4,549,874	-		DDA3937_RS19975	0.63	+0.7
4,549,874	-		DDA3937_RS19975	0.63	+0.8
4,549,874	-		DDA3937_RS19975	0.63	-0.2
4,549,874	-		DDA3937_RS19975	0.63	+0.3
4,549,967	+		DDA3937_RS19975	0.73	+1.6
4,549,974	-		DDA3937_RS19975	0.74	-0.1
4,549,990	+		DDA3937_RS19975	0.75	-0.5
4,549,991	-		DDA3937_RS19975	0.75	-1.2
4,549,991	-				+3.7
4,549,991	-		DDA3937_RS19975	0.75	+2.0
4,549,991	-		DDA3937_RS19975	0.75	-0.8
4,549,991	-		DDA3937_RS19975	0.75	-0.3
4,549,991	-		DDA3937_RS19975	0.75	-0.4
4,549,991	-		DDA3937_RS19975	0.75	-1.7
4,550,024	+		DDA3937_RS19975	0.79	+0.2
4,550,024	+		DDA3937_RS19975	0.79	-0.2
4,550,024	+		DDA3937_RS19975	0.79	-0.5
4,550,024	+		DDA3937_RS19975	0.79	+0.5
4,550,024	+		DDA3937_RS19975	0.79	-0.4
4,550,024	+		DDA3937_RS19975	0.79	-1.6
4,550,025	-		DDA3937_RS19975	0.79	-1.1
4,550,025	-				-1.4
4,550,025	-				+1.5
4,550,025	-		DDA3937_RS19975	0.79	-0.4
4,550,025	-		DDA3937_RS19975	0.79	+1.3
4,550,025	-		DDA3937_RS19975	0.79	-1.5
4,550,027	+		DDA3937_RS19975	0.79	-0.4
4,550,027	+		DDA3937_RS19975	0.79	-0.3
4,550,027	+		DDA3937_RS19975	0.79	-0.8
4,550,027	+		DDA3937_RS19975	0.79	-0.0
4,550,027	+		DDA3937_RS19975	0.79	+1.9
4,550,027	+		DDA3937_RS19975	0.79	+0.9
4,550,027	+		DDA3937_RS19975	0.79	+0.3
4,550,028	-		DDA3937_RS19975	0.79	-1.6
4,550,028	-		DDA3937_RS19975	0.79	+1.0
4,550,028	-		DDA3937_RS19975	0.79	-1.0
4,550,028	-		DDA3937_RS19975	0.79	-0.6
4,550,028	-		DDA3937_RS19975	0.79	-0.2
4,550,111	+		DDA3937_RS19975	0.88	-0.9
4,550,111	+		DDA3937_RS19975	0.88	-0.1
4,550,111	+		DDA3937_RS19975	0.88	+0.5
4,550,111	+		DDA3937_RS19975	0.88	+0.9
4,550,111	+				+0.2
4,550,111	+		DDA3937_RS19975	0.88	+0.6
4,550,112	-		DDA3937_RS19975	0.88	+0.2
4,550,112	-		DDA3937_RS19975	0.88	+1.9
4,550,112	-		DDA3937_RS19975	0.88	-0.5
4,550,112	-		DDA3937_RS19975	0.88	-1.4
4,550,112	-		DDA3937_RS19975	0.88	-0.3
4,550,112	-		DDA3937_RS19975	0.88	-2.7
4,550,150	+				-0.3
4,550,150	+				+0.5
4,550,150	+				-0.2
4,550,151	-				+0.4
4,550,151	-				-1.8
4,550,151	-				-0.5
4,550,186	+				+1.4
4,550,186	+				+1.2
4,550,245	+				-1.4
4,550,245	+				-0.7
4,550,246	-				+0.2
4,550,296	+				-0.9
4,550,296	+				-0.3
4,550,297	-				+1.9
4,550,299	+				+1.0
4,550,299	+				-0.1
4,550,300	-				+0.3
4,550,523	+		DDA3937_RS19980	0.24	+0.1
4,550,551	+		DDA3937_RS19980	0.26	+2.0
4,550,575	+		DDA3937_RS19980	0.28	+0.5
4,550,575	+		DDA3937_RS19980	0.28	-1.1
4,550,683	+		DDA3937_RS19980	0.37	+0.1
4,550,683	+		DDA3937_RS19980	0.37	+0.6
4,550,683	+		DDA3937_RS19980	0.37	-1.1
4,550,683	+		DDA3937_RS19980	0.37	-1.7
4,550,692	+		DDA3937_RS19980	0.37	+0.8
4,550,693	-		DDA3937_RS19980	0.37	+1.1
4,550,770	-		DDA3937_RS19980	0.44	+0.0
4,550,776	-		DDA3937_RS19980	0.44	-1.3
4,550,904	+		DDA3937_RS19980	0.55	+0.4
4,550,904	+		DDA3937_RS19980	0.55	-0.5
4,550,904	+		DDA3937_RS19980	0.55	+0.4
4,550,905	-		DDA3937_RS19980	0.55	-1.0
4,550,905	-		DDA3937_RS19980	0.55	+3.9
4,550,905	-				+0.9
4,550,905	-		DDA3937_RS19980	0.55	-1.0
4,550,905	-		DDA3937_RS19980	0.55	-0.1
4,550,905	-		DDA3937_RS19980	0.55	-0.5
4,550,905	-		DDA3937_RS19980	0.55	+0.3
4,550,905	-		DDA3937_RS19980	0.55	+0.8
4,550,905	-		DDA3937_RS19980	0.55	-0.8
4,550,905	-		DDA3937_RS19980	0.55	-0.0
4,550,905	-		DDA3937_RS19980	0.55	-0.1
4,550,981	+		DDA3937_RS19980	0.61	-1.0
4,550,982	-		DDA3937_RS19980	0.61	-0.6
4,550,982	-				+2.1
4,550,982	-		DDA3937_RS19980	0.61	+0.3
4,550,982	-		DDA3937_RS19980	0.61	+1.2
4,551,093	-		DDA3937_RS19980	0.70	-1.4
4,551,095	+		DDA3937_RS19980	0.70	-0.3
4,551,095	+		DDA3937_RS19980	0.70	-0.8
4,551,095	+		DDA3937_RS19980	0.70	+0.5
4,551,096	-		DDA3937_RS19980	0.70	+0.2
4,551,096	-		DDA3937_RS19980	0.70	-1.4
4,551,096	-		DDA3937_RS19980	0.70	+0.2
4,551,096	-		DDA3937_RS19980	0.70	+0.6
4,551,096	-		DDA3937_RS19980	0.70	-0.5
4,551,100	+		DDA3937_RS19980	0.71	+1.6
4,551,101	-		DDA3937_RS19980	0.71	+0.6
4,551,101	-		DDA3937_RS19980	0.71	-0.4
4,551,127	+		DDA3937_RS19980	0.73	+0.3
4,551,153	+		DDA3937_RS19980	0.75	+1.0
4,551,163	+		DDA3937_RS19980	0.76	+0.3
4,551,163	+				-1.4
4,551,163	+		DDA3937_RS19980	0.76	+1.6
4,551,164	-		DDA3937_RS19980	0.76	-0.7
4,551,164	-		DDA3937_RS19980	0.76	-3.1
4,551,164	-		DDA3937_RS19980	0.76	+0.5
4,551,164	-		DDA3937_RS19980	0.76	+0.4
4,551,164	-		DDA3937_RS19980	0.76	+0.7
4,551,188	+		DDA3937_RS19980	0.78	+0.3
4,551,215	+		DDA3937_RS19980	0.80	+0.4
4,551,216	-		DDA3937_RS19980	0.80	+0.1