Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13460

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,068,723	+				+2.4
3,068,723	+				+1.9
3,068,724	-				+2.5
3,068,813	+				+4.4
3,068,813	+				-2.0
3,068,814	-				+1.3
3,068,821	+				+1.5
3,068,821	+				+1.4
3,068,821	+				+4.2
3,068,821	+				+4.6
3,068,822	-				-1.5
3,068,822	-				-1.5
3,068,885	+				+1.6
3,068,885	+				+1.1
3,068,885	+				+2.3
3,068,885	+				+2.0
3,068,885	+				+2.4
3,068,886	-				-0.2
3,068,889	+				+3.0
3,068,890	-				-0.4
3,068,890	-				-0.1
3,068,890	-				+0.2
3,069,051	+		DDA3937_RS13455	0.18	+1.3
3,069,121	-		DDA3937_RS13455	0.27	+1.9
3,069,166	+		DDA3937_RS13455	0.32	+1.3
3,069,166	+		DDA3937_RS13455	0.32	+3.1
3,069,166	+		DDA3937_RS13455	0.32	-0.2
3,069,167	-		DDA3937_RS13455	0.33	+4.4
3,069,167	-		DDA3937_RS13455	0.33	+1.5
3,069,167	-		DDA3937_RS13455	0.33	+2.1
3,069,167	-		DDA3937_RS13455	0.33	+2.4
3,069,175	+		DDA3937_RS13455	0.34	+2.2
3,069,218	+		DDA3937_RS13455	0.39	+2.4
3,069,218	+		DDA3937_RS13455	0.39	+1.9
3,069,219	-		DDA3937_RS13455	0.39	+3.4
3,069,354	+		DDA3937_RS13455	0.56	+2.6
3,069,354	+		DDA3937_RS13455	0.56	+1.9
3,069,355	-		DDA3937_RS13455	0.57	+2.1
3,069,355	-		DDA3937_RS13455	0.57	+2.6
3,069,355	-		DDA3937_RS13455	0.57	+2.1
3,069,355	-		DDA3937_RS13455	0.57	+3.9
3,069,355	-		DDA3937_RS13455	0.57	+4.5
3,069,451	+		DDA3937_RS13455	0.69	+2.2
3,069,558	+		DDA3937_RS13455	0.83	+4.9
3,069,558	+		DDA3937_RS13455	0.83	+1.0
3,069,558	+		DDA3937_RS13455	0.83	+2.2
3,069,558	+		DDA3937_RS13455	0.83	+1.5
3,069,558	+		DDA3937_RS13455	0.83	+0.9
3,069,558	+		DDA3937_RS13455	0.83	+1.7
3,069,559	-		DDA3937_RS13455	0.83	+0.9
3,069,559	-		DDA3937_RS13455	0.83	+2.7
3,069,575	+		DDA3937_RS13455	0.85	+1.7
3,069,575	+		DDA3937_RS13455	0.85	+1.5
3,069,576	-		DDA3937_RS13455	0.85	+2.7
3,069,629	+				+3.4
3,069,630	-				+1.6
3,069,630	-				+2.5
3,069,631	+				+1.9
3,069,631	+				+2.6
3,069,631	+				+1.9
3,069,631	+				+3.5
3,069,631	+				+2.9
3,069,631	+				+1.6
3,069,631	+				+2.4
3,069,631	+				+2.2
3,069,632	-				+2.5
3,069,632	-				+0.5
3,069,632	-				+2.1
3,069,632	-				+1.4
3,069,632	-				+2.1
3,069,640	+				+1.7
3,069,640	+				+2.1
3,069,640	+				+3.7
3,069,641	-				+1.9
3,069,641	-				+1.9
3,069,643	+				+1.8
3,069,643	+				+3.4
3,069,643	+				+1.7
3,069,643	+				+3.5
3,069,643	+				+1.7
3,069,644	-				+2.7
3,069,644	-				+1.5
3,069,644	-				+2.1
3,069,644	-				+2.2
3,069,644	-				+0.3
3,069,680	+				+3.5
3,069,681	-				+3.8
3,069,722	+				+3.7
3,069,722	+				+2.3
3,069,722	+				+0.6
3,069,722	+				+1.3
3,069,723	-				+1.4
3,069,723	-				+1.6
3,069,723	-				+0.9
3,069,723	-				-0.5
3,069,736	+				+2.7
3,069,736	+				+1.8
3,069,756	+				+1.9
3,069,757	-				+2.9
3,069,840	+		DDA3937_RS13460	0.16	+1.4
3,069,840	+		DDA3937_RS13460	0.16	+1.9
3,069,840	+		DDA3937_RS13460	0.16	+6.0
3,069,841	-		DDA3937_RS13460	0.16	+2.5
3,069,841	-		DDA3937_RS13460	0.16	+1.5
3,069,862	+		DDA3937_RS13460	0.19	+3.4
3,069,898	+		DDA3937_RS13460	0.23	+0.7
3,069,898	+		DDA3937_RS13460	0.23	+1.9
3,070,069	-		DDA3937_RS13460	0.46	+3.0
3,070,071	+		DDA3937_RS13460	0.46	+1.7
3,070,071	+		DDA3937_RS13460	0.46	+2.2
3,070,071	+		DDA3937_RS13460	0.46	+3.9
3,070,072	-		DDA3937_RS13460	0.46	-0.1
3,070,072	-		DDA3937_RS13460	0.46	+4.0
3,070,072	-		DDA3937_RS13460	0.46	+0.6
3,070,072	-		DDA3937_RS13460	0.46	-1.0
3,070,072	-		DDA3937_RS13460	0.46	+1.6
3,070,156	-		DDA3937_RS13460	0.58	+2.8
3,070,167	+		DDA3937_RS13460	0.59	+2.6
3,070,168	-		DDA3937_RS13460	0.59	+2.3
3,070,179	+		DDA3937_RS13460	0.61	+2.4
3,070,180	-		DDA3937_RS13460	0.61	+2.6
3,070,180	-		DDA3937_RS13460	0.61	+2.4
3,070,181	+		DDA3937_RS13460	0.61	+1.4
3,070,181	+		DDA3937_RS13460	0.61	+4.8
3,070,181	+		DDA3937_RS13460	0.61	+2.3
3,070,182	-		DDA3937_RS13460	0.61	+2.6
3,070,182	-		DDA3937_RS13460	0.61	+1.0
3,070,182	-		DDA3937_RS13460	0.61	+3.3
3,070,182	-		DDA3937_RS13460	0.61	+2.7
3,070,182	-		DDA3937_RS13460	0.61	+2.6
3,070,182	-		DDA3937_RS13460	0.61	+1.9
3,070,182	-		DDA3937_RS13460	0.61	+4.6
3,070,260	-		DDA3937_RS13460	0.71	+2.9
3,070,260	-		DDA3937_RS13460	0.71	+2.6
3,070,260	-		DDA3937_RS13460	0.71	+2.3
3,070,303	+		DDA3937_RS13460	0.77	+0.1
3,070,304	-		DDA3937_RS13460	0.77	+3.3
3,070,304	-		DDA3937_RS13460	0.77	+2.8
3,070,304	-		DDA3937_RS13460	0.77	+4.7
3,070,304	-		DDA3937_RS13460	0.77	+5.2
3,070,304	-		DDA3937_RS13460	0.77	+3.0
3,070,315	-		DDA3937_RS13460	0.79	+3.0
3,070,315	-		DDA3937_RS13460	0.79	+2.7
3,070,315	-		DDA3937_RS13460	0.79	+3.7
3,070,405	-				+1.9
3,070,405	-				+2.7
3,070,405	-				+1.8
3,070,405	-				+4.7
3,070,460	+				+2.3
3,070,460	+				+2.1
3,070,460	+				+2.4
3,070,460	+				+4.1
3,070,460	+				+2.2
3,070,461	-				+5.4
3,070,461	-				+1.7
3,070,461	-				+1.9
3,070,461	-				+1.9
3,070,461	-				+1.4
3,070,461	-				+2.4
3,070,464	+				+2.2
3,070,495	+				+1.5
3,070,495	+				+0.9
3,070,496	-				+0.5
3,070,566	-				+2.7
3,070,566	-				-1.0
3,070,566	-				+3.3
3,070,570	-				+0.3
3,070,602	+				+3.9
3,070,609	-				+1.7
3,070,617	+				+2.1
3,070,711	+		DDA3937_RS13465	0.18	+1.7
3,070,711	+		DDA3937_RS13465	0.18	+1.8
3,070,711	+		DDA3937_RS13465	0.18	+0.0
3,070,711	+				+3.0
3,070,711	+		DDA3937_RS13465	0.18	+3.0
3,070,712	-		DDA3937_RS13465	0.18	+2.8
3,070,712	-		DDA3937_RS13465	0.18	+0.1
3,070,756	-		DDA3937_RS13465	0.21	+2.7
3,070,788	+		DDA3937_RS13465	0.24	+1.9
3,070,789	-		DDA3937_RS13465	0.24	+4.2
3,070,789	-		DDA3937_RS13465	0.24	+1.9
3,070,799	+		DDA3937_RS13465	0.25	+2.4
3,070,800	-		DDA3937_RS13465	0.25	+0.4
3,070,800	-		DDA3937_RS13465	0.25	+3.1
3,070,835	+		DDA3937_RS13465	0.28	+3.3
3,070,859	+		DDA3937_RS13465	0.30	+4.0
3,070,860	-		DDA3937_RS13465	0.30	+1.9
3,070,900	-				-1.3
3,070,914	+		DDA3937_RS13465	0.35	+3.6
3,070,971	+		DDA3937_RS13465	0.39	+2.3
3,070,977	+		DDA3937_RS13465	0.40	+3.1
3,070,978	-		DDA3937_RS13465	0.40	+2.8
3,071,072	+		DDA3937_RS13465	0.48	+2.6
3,071,072	+		DDA3937_RS13465	0.48	+2.3
3,071,072	+		DDA3937_RS13465	0.48	+0.3
3,071,072	+		DDA3937_RS13465	0.48	+4.2
3,071,072	+		DDA3937_RS13465	0.48	+1.6
3,071,073	-		DDA3937_RS13465	0.48	+1.9
3,071,073	-		DDA3937_RS13465	0.48	+1.3
3,071,073	-		DDA3937_RS13465	0.48	+2.9
3,071,088	+		DDA3937_RS13465	0.49	+5.1
3,071,108	+		DDA3937_RS13465	0.51	+4.3
3,071,108	+		DDA3937_RS13465	0.51	+2.9
3,071,109	-		DDA3937_RS13465	0.51	+2.0
3,071,109	-		DDA3937_RS13465	0.51	+2.6
3,071,121	+		DDA3937_RS13465	0.52	+2.9
3,071,121	+		DDA3937_RS13465	0.52	+2.5
3,071,121	+		DDA3937_RS13465	0.52	+2.6
3,071,122	-		DDA3937_RS13465	0.52	+2.2
3,071,122	-		DDA3937_RS13465	0.52	+1.9
3,071,122	-		DDA3937_RS13465	0.52	+3.2
3,071,139	+		DDA3937_RS13465	0.53	+2.1
3,071,139	+		DDA3937_RS13465	0.53	+1.0
3,071,140	-		DDA3937_RS13465	0.54	+1.9
3,071,144	+		DDA3937_RS13465	0.54	+3.5
3,071,144	+		DDA3937_RS13465	0.54	+2.2
3,071,145	-		DDA3937_RS13465	0.54	+2.4
3,071,145	-		DDA3937_RS13465	0.54	+2.7
3,071,145	-		DDA3937_RS13465	0.54	+2.5
3,071,145	-		DDA3937_RS13465	0.54	+0.7
3,071,145	-		DDA3937_RS13465	0.54	+2.7
3,071,145	-		DDA3937_RS13465	0.54	+2.1
3,071,151	+		DDA3937_RS13465	0.54	+1.7
3,071,152	-		DDA3937_RS13465	0.55	+3.1
3,071,152	-		DDA3937_RS13465	0.55	+2.8
3,071,154	+		DDA3937_RS13465	0.55	+2.2
3,071,154	+		DDA3937_RS13465	0.55	+3.8
3,071,154	+		DDA3937_RS13465	0.55	+1.8
3,071,154	+		DDA3937_RS13465	0.55	+3.3
3,071,155	-		DDA3937_RS13465	0.55	+1.3
3,071,155	-		DDA3937_RS13465	0.55	+2.2
3,071,155	-		DDA3937_RS13465	0.55	+2.2
3,071,155	-		DDA3937_RS13465	0.55	+3.0
3,071,163	+		DDA3937_RS13465	0.55	+3.7
3,071,163	+		DDA3937_RS13465	0.55	+1.9
3,071,163	+		DDA3937_RS13465	0.55	+1.1
3,071,164	-		DDA3937_RS13465	0.56	+3.9
3,071,164	-		DDA3937_RS13465	0.56	+2.1
3,071,165	+		DDA3937_RS13465	0.56	+4.9
3,071,165	+		DDA3937_RS13465	0.56	+2.3
3,071,165	+		DDA3937_RS13465	0.56	+4.1
3,071,165	+		DDA3937_RS13465	0.56	+2.1
3,071,165	+		DDA3937_RS13465	0.56	-1.4
3,071,165	+		DDA3937_RS13465	0.56	+4.3
3,071,166	-		DDA3937_RS13465	0.56	+2.2
3,071,166	-		DDA3937_RS13465	0.56	+3.3
3,071,166	-		DDA3937_RS13465	0.56	+3.1
3,071,166	-		DDA3937_RS13465	0.56	+2.6
3,071,175	+		DDA3937_RS13465	0.56	+5.3
3,071,175	+		DDA3937_RS13465	0.56	+0.9
3,071,175	+		DDA3937_RS13465	0.56	+0.9
3,071,175	+		DDA3937_RS13465	0.56	+3.3
3,071,175	+		DDA3937_RS13465	0.56	+1.9
3,071,175	+		DDA3937_RS13465	0.56	+2.2
3,071,175	+		DDA3937_RS13465	0.56	+2.2
3,071,176	-		DDA3937_RS13465	0.56	+1.9
3,071,176	-		DDA3937_RS13465	0.56	+2.2
3,071,176	-		DDA3937_RS13465	0.56	+1.5
3,071,176	-		DDA3937_RS13465	0.56	+1.8
3,071,176	-		DDA3937_RS13465	0.56	+1.9
3,071,176	-		DDA3937_RS13465	0.56	+2.4
3,071,176	-		DDA3937_RS13465	0.56	+3.7
3,071,176	-		DDA3937_RS13465	0.56	+0.8
3,071,178	+		DDA3937_RS13465	0.57	+3.7
3,071,179	-		DDA3937_RS13465	0.57	+3.3
3,071,179	-		DDA3937_RS13465	0.57	+0.7
3,071,179	-		DDA3937_RS13465	0.57	+1.8
3,071,379	+		DDA3937_RS13465	0.73	+3.4
3,071,388	+		DDA3937_RS13465	0.74	+1.4
3,071,388	+		DDA3937_RS13465	0.74	-0.7
3,071,409	+		DDA3937_RS13465	0.76	+2.3
3,071,416	-		DDA3937_RS13465	0.77	+2.9
3,071,416	-		DDA3937_RS13465	0.77	+4.9
3,071,416	-		DDA3937_RS13465	0.77	+1.9
3,071,417	+		DDA3937_RS13465	0.77	+3.2
3,071,417	+		DDA3937_RS13465	0.77	+3.1
3,071,417	+		DDA3937_RS13465	0.77	+2.9
3,071,417	+		DDA3937_RS13465	0.77	+2.0
3,071,417	+		DDA3937_RS13465	0.77	+3.8
3,071,417	+		DDA3937_RS13465	0.77	+0.4
3,071,417	+		DDA3937_RS13465	0.77	+2.6
3,071,418	-		DDA3937_RS13465	0.77	+1.7
3,071,418	-		DDA3937_RS13465	0.77	+2.5
3,071,418	-		DDA3937_RS13465	0.77	+2.0
3,071,418	-		DDA3937_RS13465	0.77	+3.4
3,071,418	-		DDA3937_RS13465	0.77	+2.5
3,071,418	-		DDA3937_RS13465	0.77	+1.6
3,071,418	-		DDA3937_RS13465	0.77	+5.5
3,071,419	+		DDA3937_RS13465	0.77	+2.9
3,071,419	+		DDA3937_RS13465	0.77	+3.4
3,071,419	+		DDA3937_RS13465	0.77	+2.5
3,071,419	+		DDA3937_RS13465	0.77	+1.0
3,071,419	+		DDA3937_RS13465	0.77	+2.8
3,071,419	+		DDA3937_RS13465	0.77	+5.5
3,071,419	+		DDA3937_RS13465	0.77	+2.5
3,071,419	+		DDA3937_RS13465	0.77	+1.7
3,071,420	-		DDA3937_RS13465	0.77	+1.9
3,071,420	-		DDA3937_RS13465	0.77	+4.2
3,071,420	-		DDA3937_RS13465	0.77	+2.5
3,071,420	-		DDA3937_RS13465	0.77	+3.1
3,071,420	-		DDA3937_RS13465	0.77	+2.1
3,071,420	-		DDA3937_RS13465	0.77	+3.0
3,071,420	-		DDA3937_RS13465	0.77	+2.5
3,071,420	-		DDA3937_RS13465	0.77	+5.5
3,071,420	-		DDA3937_RS13465	0.77	+2.3
3,071,420	-		DDA3937_RS13465	0.77	+0.6
3,071,420	-		DDA3937_RS13465	0.77	+2.1
3,071,460	+		DDA3937_RS13465	0.80	+2.5