Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS13365

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
3,050,891	-		DDA3937_RS13355	0.58	-1.8
3,050,995	-		DDA3937_RS13355	0.87	-2.1
3,050,995	-		DDA3937_RS13355	0.87	-1.3
3,050,995	-				+0.2
3,050,995	-		DDA3937_RS13355	0.87	-0.8
3,051,014	+				-1.8
3,051,015	-				-0.3
3,051,059	+				-1.0
3,051,059	+				-1.6
3,051,060	-				-0.5
3,051,092	+				-1.3
3,051,125	+				+0.4
3,051,156	+				-0.8
3,051,157	-				-1.8
3,051,158	+				+0.1
3,051,168	+				+1.5
3,051,201	+				-1.3
3,051,201	+				-1.1
3,051,202	-				-0.3
3,051,202	-				-0.1
3,051,227	+				+2.5
3,051,235	+				+3.7
3,051,235	+				+3.5
3,051,235	+				+3.5
3,051,235	+				+3.6
3,051,236	-				-1.8
3,051,236	-				+4.9
3,051,268	+		DDA3937_RS13360	0.14	+2.6
3,051,268	+		DDA3937_RS13360	0.14	+2.4
3,051,268	+		DDA3937_RS13360	0.14	+0.1
3,051,269	-		DDA3937_RS13360	0.14	+1.2
3,051,272	-		DDA3937_RS13360	0.15	+2.9
3,051,512	+				+3.4
3,051,532	+				+2.4
3,051,533	-				+2.8
3,051,533	-				+1.9
3,051,533	-				+2.5
3,051,590	+				+2.4
3,051,590	+				+3.5
3,051,591	-				-0.1
3,051,596	+				+1.4
3,051,596	+				+3.4
3,051,597	-				-2.3
3,051,597	-				+0.2
3,051,600	+				+1.8
3,051,600	+				+2.4
3,051,600	+				+2.1
3,051,600	+				+1.4
3,051,601	-				+0.7
3,051,601	-				+0.6
3,051,601	-				+0.2
3,051,603	-				-1.1
3,051,603	-				-0.1
3,051,619	-				-0.4
3,051,637	-				-0.6
3,051,645	+				+3.4
3,051,645	+				+2.4
3,051,645	+				+2.2
3,051,645	+				+4.5
3,051,645	+				+2.3
3,051,645	+				+2.3
3,051,646	-				-0.8
3,051,646	-				+0.8
3,051,646	-				+0.1
3,051,646	-				+1.0
3,051,646	-				+0.1
3,051,667	-				+1.0
3,051,676	+				+2.1
3,051,683	-				+0.8
3,051,683	-				+1.2
3,051,687	+				+0.6
3,051,690	+				+1.5
3,051,691	-				+1.6
3,051,699	+				+0.8
3,051,700	-				+0.6
3,051,700	-				+0.9
3,051,700	-				+0.8
3,051,724	-				+2.7
3,051,755	+				-0.8
3,051,755	+				+0.5
3,051,755	+				-0.2
3,051,756	-				+6.2
3,051,756	-				+4.2
3,051,769	+				-1.9
3,051,770	-				+2.9
3,051,775	+				-2.8
3,051,775	+				-1.1
3,051,776	-				+2.5
3,051,776	-				+2.4
3,051,790	+				-0.2
3,051,822	+				+1.8
3,051,841	+				+2.9
3,051,865	+				+3.0
3,051,865	+				+5.4
3,051,866	-				+2.9
3,051,866	-				+2.5
3,051,866	-				+2.0
3,051,870	+				+1.6
3,051,870	+				+3.9
3,051,870	+				+2.7
3,051,870	+				+3.1
3,051,871	-				+4.6
3,051,871	-				+2.3
3,051,871	-				+3.3
3,051,881	+				+2.7
3,051,882	-				-1.1
3,051,981	+				+2.3
3,051,981	+				+3.1
3,052,039	+				+2.1
3,052,039	+				+4.1
3,052,039	+				+1.4
3,052,040	-				+3.3
3,052,040	-				+2.2
3,052,072	-		DDA3937_RS13365	0.12	+3.2
3,052,156	+		DDA3937_RS13365	0.17	+2.2
3,052,156	+		DDA3937_RS13365	0.17	+2.4
3,052,270	+		DDA3937_RS13365	0.23	+2.8
3,052,270	+		DDA3937_RS13365	0.23	+2.7
3,052,270	+		DDA3937_RS13365	0.23	+3.8
3,052,271	-		DDA3937_RS13365	0.23	+2.8
3,052,271	-		DDA3937_RS13365	0.23	+2.8
3,052,271	-		DDA3937_RS13365	0.23	+1.5
3,052,340	+		DDA3937_RS13365	0.27	+2.6
3,052,341	-		DDA3937_RS13365	0.27	+2.1
3,052,341	-		DDA3937_RS13365	0.27	+3.7
3,052,450	-		DDA3937_RS13365	0.34	+7.0
3,052,450	-		DDA3937_RS13365	0.34	+3.1
3,052,458	+		DDA3937_RS13365	0.34	+2.4
3,052,458	+		DDA3937_RS13365	0.34	+4.4
3,052,458	+		DDA3937_RS13365	0.34	+3.2
3,052,459	-		DDA3937_RS13365	0.34	+2.7
3,052,459	-		DDA3937_RS13365	0.34	+4.0
3,052,459	-		DDA3937_RS13365	0.34	+3.1
3,052,463	-		DDA3937_RS13365	0.34	+2.6
3,052,463	-		DDA3937_RS13365	0.34	+1.9
3,052,463	-		DDA3937_RS13365	0.34	+1.6
3,052,463	-		DDA3937_RS13365	0.34	+1.7
3,052,463	-		DDA3937_RS13365	0.34	+2.0
3,052,481	+		DDA3937_RS13365	0.35	+1.8
3,052,586	-		DDA3937_RS13365	0.42	+3.1
3,052,586	-		DDA3937_RS13365	0.42	+2.7
3,052,586	-		DDA3937_RS13365	0.42	+3.3
3,052,606	-		DDA3937_RS13365	0.43	-1.0
3,052,609	+		DDA3937_RS13365	0.43	+3.1
3,052,609	+		DDA3937_RS13365	0.43	+3.4
3,052,610	-		DDA3937_RS13365	0.43	+2.1
3,052,720	+		DDA3937_RS13365	0.49	+2.7
3,052,720	+		DDA3937_RS13365	0.49	+2.9
3,052,720	+		DDA3937_RS13365	0.49	+3.3
3,052,720	+		DDA3937_RS13365	0.49	+2.8
3,052,721	-		DDA3937_RS13365	0.49	+2.9
3,052,721	-		DDA3937_RS13365	0.49	+1.9
3,052,729	-		DDA3937_RS13365	0.50	+1.1
3,052,729	-		DDA3937_RS13365	0.50	+1.9
3,052,754	+		DDA3937_RS13365	0.51	+2.8
3,052,755	-		DDA3937_RS13365	0.51	+3.3
3,052,755	-		DDA3937_RS13365	0.51	+0.8
3,052,755	-		DDA3937_RS13365	0.51	+3.6
3,052,802	+		DDA3937_RS13365	0.54	+2.0
3,052,802	+		DDA3937_RS13365	0.54	+4.2
3,052,802	+		DDA3937_RS13365	0.54	+4.1
3,052,802	+		DDA3937_RS13365	0.54	+3.3
3,052,802	+		DDA3937_RS13365	0.54	+3.5
3,052,802	+		DDA3937_RS13365	0.54	+2.6
3,052,803	-		DDA3937_RS13365	0.54	+2.7
3,052,803	-		DDA3937_RS13365	0.54	+2.5
3,052,803	-		DDA3937_RS13365	0.54	+4.8
3,052,803	-		DDA3937_RS13365	0.54	+3.0
3,052,857	+		DDA3937_RS13365	0.57	+2.9
3,052,884	+		DDA3937_RS13365	0.59	+0.3
3,052,884	+		DDA3937_RS13365	0.59	+4.7
3,052,905	+		DDA3937_RS13365	0.60	+2.9
3,052,944	+		DDA3937_RS13365	0.62	+4.4
3,052,944	+		DDA3937_RS13365	0.62	+3.0
3,052,944	+		DDA3937_RS13365	0.62	+2.3
3,052,945	-		DDA3937_RS13365	0.62	+2.8
3,052,945	-		DDA3937_RS13365	0.62	+3.4
3,052,981	+		DDA3937_RS13365	0.64	-1.6
3,052,981	+		DDA3937_RS13365	0.64	+4.0
3,052,981	+		DDA3937_RS13365	0.64	+4.5
3,052,981	+		DDA3937_RS13365	0.64	+2.2
3,052,981	+		DDA3937_RS13365	0.64	+3.0
3,052,982	-		DDA3937_RS13365	0.65	+2.7
3,053,011	+		DDA3937_RS13365	0.66	+4.2
3,053,011	+		DDA3937_RS13365	0.66	+0.7
3,053,012	-		DDA3937_RS13365	0.66	+2.3
3,053,012	-		DDA3937_RS13365	0.66	+4.3
3,053,012	-		DDA3937_RS13365	0.66	+2.6
3,053,089	-		DDA3937_RS13365	0.71	+2.0
3,053,092	+		DDA3937_RS13365	0.71	+4.1
3,053,092	+		DDA3937_RS13365	0.71	+4.4
3,053,093	-		DDA3937_RS13365	0.71	+3.1
3,053,093	-		DDA3937_RS13365	0.71	+0.2
3,053,093	-		DDA3937_RS13365	0.71	+2.4
3,053,093	-		DDA3937_RS13365	0.71	+1.2
3,053,093	-		DDA3937_RS13365	0.71	+3.9
3,053,214	+		DDA3937_RS13365	0.78	+2.7
3,053,217	+		DDA3937_RS13365	0.78	+3.5
3,053,217	+		DDA3937_RS13365	0.78	+3.5
3,053,217	+		DDA3937_RS13365	0.78	+2.9
3,053,217	+		DDA3937_RS13365	0.78	+2.8
3,053,217	+		DDA3937_RS13365	0.78	+6.1
3,053,217	+		DDA3937_RS13365	0.78	+2.8
3,053,217	+		DDA3937_RS13365	0.78	+5.2
3,053,218	-		DDA3937_RS13365	0.78	+3.6
3,053,218	-		DDA3937_RS13365	0.78	+5.1
3,053,218	-		DDA3937_RS13365	0.78	+5.9
3,053,218	-		DDA3937_RS13365	0.78	+1.0
3,053,218	-		DDA3937_RS13365	0.78	+2.9
3,053,218	-		DDA3937_RS13365	0.78	+0.9
3,053,218	-		DDA3937_RS13365	0.78	+2.4
3,053,218	-		DDA3937_RS13365	0.78	-0.5
3,053,300	+		DDA3937_RS13365	0.83	+2.7
3,053,300	+		DDA3937_RS13365	0.83	+3.9
3,053,346	+				+4.3
3,053,346	+		DDA3937_RS13365	0.86	+3.6
3,053,346	+		DDA3937_RS13365	0.86	+2.6
3,053,451	+				+2.9
3,053,451	+				+1.9
3,053,451	+				+2.8
3,053,562	-				+2.4
3,053,588	+				+4.2
3,053,588	+				+2.6
3,053,588	+				+2.6
3,053,588	+				+2.1
3,053,589	-				+0.5
3,053,589	-				+1.6
3,053,589	-				+4.0
3,053,589	-				+0.2
3,053,589	-				+2.7
3,053,589	-				+3.4
3,053,604	-				+2.3
3,053,623	+				+2.9
3,053,623	+				-1.3
3,053,664	-				+4.0
3,053,699	+		DDA3937_RS13370	0.11	+3.1
3,053,700	-		DDA3937_RS13370	0.11	+1.4
3,053,781	+		DDA3937_RS13370	0.19	+3.3
3,053,781	+		DDA3937_RS13370	0.19	+4.0
3,053,782	-		DDA3937_RS13370	0.19	+2.8
3,053,782	-		DDA3937_RS13370	0.19	+6.7
3,053,782	-		DDA3937_RS13370	0.19	+1.9
3,053,811	+		DDA3937_RS13370	0.22	+1.4
3,053,811	+		DDA3937_RS13370	0.22	+4.9
3,053,811	+		DDA3937_RS13370	0.22	+2.7
3,053,812	-		DDA3937_RS13370	0.22	+1.8
3,053,812	-		DDA3937_RS13370	0.22	-0.8
3,053,812	-		DDA3937_RS13370	0.22	+4.3
3,053,812	-		DDA3937_RS13370	0.22	+2.8
3,053,821	-		DDA3937_RS13370	0.23	+0.9
3,053,874	-		DDA3937_RS13370	0.29	+3.4
3,054,047	+		DDA3937_RS13370	0.46	+2.9
3,054,047	+		DDA3937_RS13370	0.46	+0.7
3,054,048	-		DDA3937_RS13370	0.46	+2.0
3,054,048	-		DDA3937_RS13370	0.46	+2.9
3,054,056	+		DDA3937_RS13370	0.47	+4.1
3,054,057	-		DDA3937_RS13370	0.47	+2.0
3,054,057	-		DDA3937_RS13370	0.47	+1.6
3,054,176	+		DDA3937_RS13370	0.59	+1.3
3,054,192	-		DDA3937_RS13370	0.61	+1.2
3,054,273	-		DDA3937_RS13370	0.69	+3.2
3,054,273	-		DDA3937_RS13370	0.69	+3.9
3,054,473	-		DDA3937_RS13370	0.89	+2.6
3,054,476	+		DDA3937_RS13370	0.89	+3.9
3,054,476	+		DDA3937_RS13370	0.89	+2.6
3,054,476	+		DDA3937_RS13370	0.89	+2.7
3,054,476	+		DDA3937_RS13370	0.89	+1.3
3,054,476	+		DDA3937_RS13370	0.89	+4.3
3,054,476	+		DDA3937_RS13370	0.89	-1.6
3,054,476	+		DDA3937_RS13370	0.89	+2.7
3,054,476	+		DDA3937_RS13370	0.89	+3.7
3,054,476	+		DDA3937_RS13370	0.89	-1.3
3,054,476	+		DDA3937_RS13370	0.89	+1.8
3,054,476	+		DDA3937_RS13370	0.89	+5.7
3,054,476	+		DDA3937_RS13370	0.89	+2.4
3,054,476	+		DDA3937_RS13370	0.89	+4.5
3,054,477	-		DDA3937_RS13370	0.89	+2.3
3,054,477	-		DDA3937_RS13370	0.89	+3.2
3,054,477	-		DDA3937_RS13370	0.89	+2.5
3,054,477	-		DDA3937_RS13370	0.89	+2.6
3,054,477	-		DDA3937_RS13370	0.89	+3.5
3,054,477	-		DDA3937_RS13370	0.89	+2.4
3,054,477	-		DDA3937_RS13370	0.89	+1.3
3,054,477	-		DDA3937_RS13370	0.89	+1.7
3,054,477	-		DDA3937_RS13370	0.89	+2.4
3,054,477	-		DDA3937_RS13370	0.89	+1.2
3,054,477	-		DDA3937_RS13370	0.89	+2.9
3,054,477	-		DDA3937_RS13370	0.89	+3.2
3,054,477	-		DDA3937_RS13370	0.89	+0.1
3,054,520	+				+3.2
3,054,520	+				+3.1
3,054,520	+				+4.6
3,054,520	+				+4.3
3,054,520	+				+3.6
3,054,521	-				+1.8
3,054,579	+				+2.3
3,054,580	-				+4.1