Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS10650

Experiment: M9+glycerol

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9+glycerol
2,396,902	+		DDA3937_RS10645	0.58	-0.5
2,397,002	+		DDA3937_RS10645	0.64	+0.8
2,397,114	+		DDA3937_RS10645	0.71	-1.9
2,397,115	-		DDA3937_RS10645	0.71	-0.9
2,397,115	-		DDA3937_RS10645	0.71	-0.9
2,397,122	-		DDA3937_RS10645	0.72	+1.1
2,397,206	+		DDA3937_RS10645	0.77	-0.4
2,397,206	+		DDA3937_RS10645	0.77	-1.0
2,397,207	-		DDA3937_RS10645	0.77	-2.7
2,397,207	-				+0.9
2,397,207	-		DDA3937_RS10645	0.77	-0.2
2,397,381	+		DDA3937_RS10645	0.88	-0.4
2,397,473	+				-1.3
2,397,473	+				+1.3
2,397,473	+				-2.0
2,397,473	+				-2.1
2,397,565	+				-1.4
2,397,565	+				+0.1
2,397,565	+				-1.1
2,397,565	+				-1.3
2,397,565	+				-0.9
2,397,565	+				+0.1
2,397,566	-				-1.6
2,397,566	-				+0.1
2,397,566	-				-0.3
2,397,566	-				-0.9
2,397,567	+				-1.1
2,397,567	+				-2.4
2,397,567	+				-0.6
2,397,568	-				-2.4
2,397,568	-				-1.7
2,397,569	+				-1.7
2,397,569	+				-1.4
2,397,569	+				+0.7
2,397,570	-				+1.4
2,397,570	-				-0.7
2,397,570	-				-2.2
2,397,570	-				-1.1
2,397,570	-				-1.0
2,397,612	+				-0.5
2,397,612	+				-2.2
2,397,613	-				-1.7
2,397,613	-				+0.3
2,397,613	-				-0.9
2,397,613	-				-0.8
2,397,616	+				-0.1
2,397,616	+				-1.7
2,397,616	+				+1.1
2,397,616	+				-1.9
2,397,616	+				-0.4
2,397,616	+				-1.2
2,397,616	+				-1.4
2,397,616	+				-1.3
2,397,617	-				+2.4
2,397,617	-				-0.1
2,397,617	-				-0.9
2,397,617	-				-1.8
2,397,622	+				-2.0
2,397,622	+				+0.1
2,397,622	+				-0.0
2,397,622	+				-0.3
2,397,622	+				-1.2
2,397,622	+				+1.4
2,397,622	+				-2.9
2,397,622	+				-1.9
2,397,622	+				-1.4
2,397,622	+				-1.2
2,397,622	+				+0.1
2,397,622	+				-0.3
2,397,622	+				+0.1
2,397,622	+				-1.3
2,397,623	-				+0.7
2,397,623	-				-1.1
2,397,623	-				-0.9
2,397,623	-				-1.2
2,397,623	-				+0.5
2,397,623	-				-2.2
2,397,623	-				-0.4
2,397,624	+				+0.0
2,397,624	+				-2.7
2,397,624	+				-0.4
2,397,625	-				+0.5
2,397,625	-				+0.5
2,397,625	-				-0.7
2,397,625	-				-1.2
2,397,625	-				+0.1
2,397,631	-				+0.1
2,397,643	+				+0.6
2,397,644	-				+0.6
2,397,780	-		DDA3937_RS10650	0.13	+1.9
2,397,821	+		DDA3937_RS10650	0.17	+0.8
2,397,826	+		DDA3937_RS10650	0.17	-0.3
2,397,826	+		DDA3937_RS10650	0.17	+0.7
2,397,827	-		DDA3937_RS10650	0.17	+0.3
2,397,827	-		DDA3937_RS10650	0.17	-0.9
2,397,962	+		DDA3937_RS10650	0.29	-0.1
2,397,962	+		DDA3937_RS10650	0.29	+0.8
2,397,962	+		DDA3937_RS10650	0.29	-2.4
2,397,962	+		DDA3937_RS10650	0.29	+0.4
2,397,962	+		DDA3937_RS10650	0.29	-0.3
2,397,962	+		DDA3937_RS10650	0.29	-0.4
2,397,963	-		DDA3937_RS10650	0.29	+0.1
2,397,963	-		DDA3937_RS10650	0.29	-0.3
2,397,963	-		DDA3937_RS10650	0.29	-2.4
2,397,963	-		DDA3937_RS10650	0.29	+0.1
2,397,963	-		DDA3937_RS10650	0.29	+0.3
2,397,963	-		DDA3937_RS10650	0.29	+0.1
2,397,964	+		DDA3937_RS10650	0.29	+2.0
2,397,964	+		DDA3937_RS10650	0.29	+0.5
2,397,964	+		DDA3937_RS10650	0.29	+0.4
2,397,964	+		DDA3937_RS10650	0.29	+0.4
2,397,964	+		DDA3937_RS10650	0.29	+0.8
2,397,964	+		DDA3937_RS10650	0.29	+0.2
2,397,964	+		DDA3937_RS10650	0.29	-0.9
2,397,964	+		DDA3937_RS10650	0.29	+1.4
2,397,965	-		DDA3937_RS10650	0.29	+0.9
2,397,965	-		DDA3937_RS10650	0.29	+0.6
2,397,965	-		DDA3937_RS10650	0.29	-0.3
2,397,965	-		DDA3937_RS10650	0.29	+0.1
2,397,965	-		DDA3937_RS10650	0.29	-1.3
2,397,965	-		DDA3937_RS10650	0.29	-1.9
2,398,037	-		DDA3937_RS10650	0.35	-0.9
2,398,057	+		DDA3937_RS10650	0.37	-0.1
2,398,136	-		DDA3937_RS10650	0.43	-0.4
2,398,148	+		DDA3937_RS10650	0.44	+1.1
2,398,381	+		DDA3937_RS10650	0.64	-0.2
2,398,429	+		DDA3937_RS10650	0.68	-0.4
2,398,430	-		DDA3937_RS10650	0.68	+0.1
2,398,430	-		DDA3937_RS10650	0.68	+0.2
2,398,430	-				-0.9
2,398,616	+		DDA3937_RS10650	0.84	+1.1
2,398,616	+		DDA3937_RS10650	0.84	+0.9
2,398,738	+				-0.9
2,398,738	+				+0.9
2,398,761	-				+0.7
2,398,774	+				+0.6
2,398,806	-				-0.5
2,398,808	+				+0.6
2,398,822	+				+0.9
2,398,834	+				+1.0
2,398,835	-				-0.4
2,398,888	+				+0.0
2,398,888	+				+0.1
2,398,889	-				-0.2
2,398,889	-				+0.1
2,398,903	+				-1.0
2,398,911	+				-0.1
2,398,911	+				-1.0
2,398,911	+				+0.7
2,398,912	-				-0.2
2,398,912	-				-0.2
2,398,912	-				-1.2
2,398,912	-				-0.1
2,398,912	-				-1.3
2,398,912	-				-0.9
2,398,912	-				-0.1
2,398,912	-				-2.2
2,398,912	-				-1.0
2,398,913	+				+1.7
2,398,913	+				-0.3
2,398,913	+				+0.7
2,398,914	-				+1.9
2,398,914	-				-0.5
2,398,914	-				-0.7
2,398,914	-				+0.0
2,398,914	-				+0.9
2,398,914	-				+1.3
2,398,914	-				-1.1
2,398,914	-				-1.1
2,398,914	-				-0.9
2,398,914	-				-0.0
2,398,952	+				-0.5
2,398,969	-				+0.9
2,399,160	-		DDA3937_RS10655	0.13	-0.3
2,399,292	-		DDA3937_RS10655	0.22	-0.1
2,399,292	-		DDA3937_RS10655	0.22	+0.1
2,399,297	+		DDA3937_RS10655	0.22	-0.4
2,399,297	+		DDA3937_RS10655	0.22	-0.6
2,399,298	-		DDA3937_RS10655	0.23	-1.4
2,399,298	-		DDA3937_RS10655	0.23	-0.5
2,399,298	-		DDA3937_RS10655	0.23	-1.9
2,399,402	+		DDA3937_RS10655	0.30	+0.1
2,399,403	-		DDA3937_RS10655	0.30	+0.3
2,399,534	-		DDA3937_RS10655	0.39	-2.7
2,399,534	-		DDA3937_RS10655	0.39	-3.3
2,399,534	-		DDA3937_RS10655	0.39	-0.4
2,399,707	-				+1.1