Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,212,979	+				-1.5
4,212,979	+				+0.3
4,212,998	+				+0.9
4,213,043	+				+0.6
4,213,044	-				-0.5
4,213,044	-				+0.0
4,213,048	+				+1.3
4,213,048	+				-0.5
4,213,048	+				+0.2
4,213,048	+				+0.3
4,213,048	+				-0.4
4,213,048	+				+0.8
4,213,049	-				-3.2
4,213,049	-				-0.5
4,213,049	-				-2.2
4,213,049	-				-1.2
4,213,049	-				-0.7
4,213,049	-				-0.6
4,213,074	+				-0.5
4,213,080	+				-0.8
4,213,080	+				+0.3
4,213,080	+				+2.5
4,213,081	-				-0.3
4,213,081	-				-0.4
4,213,117	+				+0.2
4,213,117	+				-0.1
4,213,117	+				+0.1
4,213,117	+				+0.1
4,213,117	+				+1.3
4,213,117	+				-0.3
4,213,117	+				-0.8
4,213,117	+				-0.1
4,213,117	+				+0.3
4,213,117	+				-0.0
4,213,118	-				+0.5
4,213,118	-				+0.5
4,213,118	-				+1.5
4,213,118	-				+1.3
4,213,168	+		DZA65_RS19470	0.11	+0.4
4,213,168	+		DZA65_RS19470	0.11	+0.5
4,213,168	+		DZA65_RS19470	0.11	-0.6
4,213,169	-		DZA65_RS19470	0.11	-0.6
4,213,342	+		DZA65_RS19470	0.33	+1.1
4,213,342	+		DZA65_RS19470	0.33	-0.1
4,213,342	+		DZA65_RS19470	0.33	-0.4
4,213,342	+		DZA65_RS19470	0.33	+0.1
4,213,343	-		DZA65_RS19470	0.34	+0.1
4,213,343	-		DZA65_RS19470	0.34	-0.1
4,213,343	-		DZA65_RS19470	0.34	-0.0
4,213,343	-		DZA65_RS19470	0.34	-0.3
4,213,343	-		DZA65_RS19470	0.34	-0.3
4,213,407	+		DZA65_RS19470	0.42	+0.7
4,213,407	+		DZA65_RS19470	0.42	-2.3
4,213,408	-		DZA65_RS19470	0.42	-0.2
4,213,408	-		DZA65_RS19470	0.42	+0.5
4,213,408	-		DZA65_RS19470	0.42	-0.4
4,213,423	+		DZA65_RS19470	0.44	-0.9
4,213,510	+		DZA65_RS19470	0.55	+1.0
4,213,510	+		DZA65_RS19470	0.55	+0.1
4,213,511	-		DZA65_RS19470	0.55	-0.5
4,213,511	-		DZA65_RS19470	0.55	-0.1
4,213,511	-		DZA65_RS19470	0.55	-0.8
4,213,511	-		DZA65_RS19470	0.55	+1.4
4,213,575	+		DZA65_RS19470	0.63	-0.5
4,213,575	+		DZA65_RS19470	0.63	+0.3
4,213,575	+		DZA65_RS19470	0.63	+1.0
4,213,575	+		DZA65_RS19470	0.63	-0.1
4,213,576	-		DZA65_RS19470	0.63	-0.0
4,213,603	+		DZA65_RS19470	0.67	-1.1
4,213,603	+		DZA65_RS19470	0.67	+0.3
4,213,604	-		DZA65_RS19470	0.67	-0.2
4,213,699	+		DZA65_RS19470	0.79	-2.2
4,213,699	+		DZA65_RS19470	0.79	+0.1
4,213,700	-		DZA65_RS19470	0.79	-1.2
4,213,700	-		DZA65_RS19470	0.79	-0.6
4,213,792	+				+0.1
4,213,792	+				-0.4
4,213,793	-				+0.5
4,213,793	-				-0.9
4,213,793	-				+0.5
4,213,795	+				+0.2
4,213,795	+				+1.0
4,213,795	+				-0.7
4,213,795	+				+0.8
4,213,795	+				+0.3
4,213,795	+				+0.3
4,213,795	+				-1.1
4,213,796	-				-2.1
4,213,796	-				-0.1
4,213,796	-				+0.1
4,213,796	-				+0.4
4,213,924	+				-1.3
4,213,925	-				+0.0
4,213,927	+				+0.0
4,213,927	+				+0.9
4,213,927	+				-0.3
4,213,927	+				+0.5
4,213,928	-				-0.2
4,213,928	-				-1.5
4,213,928	-				+0.7
4,213,928	-				+0.8
4,213,928	-				-0.0
4,213,928	-				+0.4
4,213,928	-				+1.4
4,213,928	-				+0.5
4,213,929	+				-0.6
4,213,929	+				-1.1
4,213,929	+				-0.9
4,213,929	+				+0.2
4,213,929	+				-0.1
4,213,930	-				-0.5
4,213,930	-				-1.1
4,213,930	-				+0.1
4,213,930	-				+0.2
4,213,944	-				+1.1
4,213,944	-				+0.3
4,213,944	-				-0.7
4,213,956	+				-1.3
4,213,956	+				-0.5
4,213,957	-				-0.7
4,214,010	+				-0.5
4,214,010	+				+1.7
4,214,011	-				-0.1
4,214,011	-				-1.1
4,214,071	+				-1.5
4,214,531	-		DZA65_RS19475	0.45	+0.4
4,214,568	+		DZA65_RS19475	0.48	-2.5
4,214,572	-		DZA65_RS19475	0.48	-0.7
4,214,605	+		DZA65_RS19475	0.50	-0.3
4,214,732	-		DZA65_RS19475	0.60	+0.8
4,214,732	-		DZA65_RS19475	0.60	-0.8
4,214,732	-		DZA65_RS19475	0.60	-0.5
4,214,865	-		DZA65_RS19475	0.71	-1.1
4,215,017	-		DZA65_RS19475	0.82	-0.4
4,215,027	+		DZA65_RS19475	0.83	-0.7
4,215,027	+		DZA65_RS19475	0.83	-1.2
4,215,027	+		DZA65_RS19475	0.83	+0.3
4,215,027	+		DZA65_RS19475	0.83	-0.6
4,215,027	+		DZA65_RS19475	0.83	-0.6
4,215,028	-		DZA65_RS19475	0.83	+0.5
4,215,028	-		DZA65_RS19475	0.83	-0.9
4,215,028	-		DZA65_RS19475	0.83	-0.1
4,215,028	-		DZA65_RS19475	0.83	-0.3
4,215,028	-		DZA65_RS19475	0.83	-0.2
4,215,028	-		DZA65_RS19475	0.83	+0.4
4,215,028	-		DZA65_RS19475	0.83	-0.0
4,215,234	+				-0.3
4,215,234	+				+0.7
4,215,234	+				-0.0
4,215,235	-				-1.1
4,215,235	-				+0.7
4,215,235	-				-2.3
4,215,289	+				-1.0
4,215,289	+				-1.6
4,215,289	+				-0.9
4,215,290	-				+0.3
4,215,290	-				+0.3
4,215,290	-				-0.7
4,215,318	+				+0.2
4,215,319	-				+0.6
4,215,595	-		DZA65_RS19480	0.37	-0.5
4,215,759	+		DZA65_RS19480	0.55	+0.2
4,215,759	+		DZA65_RS19480	0.55	+0.7
4,215,760	-		DZA65_RS19480	0.55	-1.4
4,216,164	+				-1.2
4,216,164	+				-0.1
4,216,164	+				-2.5
4,216,164	+				-2.0
4,216,164	+				-0.7
4,216,165	-				-0.0
4,216,207	-				+0.1
4,216,240	+				-0.7
4,216,240	+				-1.3
4,216,241	-				-2.4