Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,067,502	-				+0.0
4,067,609	-				-1.9
4,067,625	+		DZA65_RS18835	0.73	-0.9
4,067,625	+		DZA65_RS18835	0.73	+1.5
4,067,625	+		DZA65_RS18835	0.73	+0.3
4,067,625	+		DZA65_RS18835	0.73	+0.6
4,067,625	+		DZA65_RS18835	0.73	+1.6
4,067,625	+		DZA65_RS18835	0.73	+1.5
4,067,625	+		DZA65_RS18835	0.73	+0.0
4,067,625	+		DZA65_RS18835	0.73	+0.3
4,067,625	+		DZA65_RS18835	0.73	-1.7
4,067,625	+		DZA65_RS18835	0.73	+0.9
4,067,625	+		DZA65_RS18835	0.73	-1.2
4,067,625	+		DZA65_RS18835	0.73	-0.5
4,067,625	+		DZA65_RS18835	0.73	-0.1
4,067,626	-		DZA65_RS18835	0.73	+0.8
4,067,626	-		DZA65_RS18835	0.73	-0.5
4,067,626	-		DZA65_RS18835	0.73	+1.0
4,067,626	-		DZA65_RS18835	0.73	+0.3
4,067,626	-		DZA65_RS18835	0.73	-0.1
4,067,626	-		DZA65_RS18835	0.73	-1.2
4,067,626	-		DZA65_RS18835	0.73	-1.0
4,067,626	-		DZA65_RS18835	0.73	+1.1
4,067,626	-		DZA65_RS18835	0.73	+0.1
4,067,626	-		DZA65_RS18835	0.73	-1.4
4,067,626	-		DZA65_RS18835	0.73	-1.1
4,067,626	-		DZA65_RS18835	0.73	-0.5
4,067,626	-		DZA65_RS18835	0.73	+0.9
4,067,627	+		DZA65_RS18835	0.73	-0.5
4,067,627	+		DZA65_RS18835	0.73	+0.9
4,067,627	+		DZA65_RS18835	0.73	-0.8
4,067,628	-		DZA65_RS18835	0.73	+0.2
4,067,628	-		DZA65_RS18835	0.73	-1.0
4,067,628	-		DZA65_RS18835	0.73	-0.1
4,067,628	-		DZA65_RS18835	0.73	+0.3
4,067,628	-		DZA65_RS18835	0.73	-0.5
4,067,628	-		DZA65_RS18835	0.73	+0.5
4,067,658	+		DZA65_RS18835	0.74	+0.4
4,067,658	+		DZA65_RS18835	0.74	-0.1
4,067,658	+		DZA65_RS18835	0.74	+0.7
4,067,659	-		DZA65_RS18835	0.74	+0.1
4,067,659	-		DZA65_RS18835	0.74	+0.6
4,067,659	-		DZA65_RS18835	0.74	+0.6
4,067,659	-		DZA65_RS18835	0.74	-0.1
4,067,659	-		DZA65_RS18835	0.74	-0.2
4,067,672	+		DZA65_RS18835	0.74	-0.1
4,067,732	-		DZA65_RS18835	0.77	-0.5
4,067,732	-		DZA65_RS18835	0.77	-0.1
4,067,785	+		DZA65_RS18835	0.79	+0.0
4,067,785	+		DZA65_RS18835	0.79	+1.1
4,067,785	+		DZA65_RS18835	0.79	-1.1
4,067,785	+		DZA65_RS18835	0.79	-0.1
4,067,785	+		DZA65_RS18835	0.79	+0.3
4,067,785	+		DZA65_RS18835	0.79	-0.5
4,067,785	+		DZA65_RS18835	0.79	+0.3
4,067,785	+		DZA65_RS18835	0.79	+0.7
4,067,786	-		DZA65_RS18835	0.79	-1.5
4,067,786	-		DZA65_RS18835	0.79	+0.3
4,067,786	-		DZA65_RS18835	0.79	+0.2
4,067,786	-		DZA65_RS18835	0.79	+0.9
4,067,786	-		DZA65_RS18835	0.79	-0.3
4,067,786	-		DZA65_RS18835	0.79	-0.2
4,067,786	-		DZA65_RS18835	0.79	+0.3
4,067,787	+		DZA65_RS18835	0.79	-1.9
4,067,814	-		DZA65_RS18835	0.80	-1.1
4,067,943	+		DZA65_RS18835	0.85	+1.6
4,067,943	+		DZA65_RS18835	0.85	+2.3
4,067,943	+		DZA65_RS18835	0.85	-0.8
4,067,943	+		DZA65_RS18835	0.85	+1.2
4,067,943	+		DZA65_RS18835	0.85	+0.2
4,067,943	+		DZA65_RS18835	0.85	+0.3
4,067,943	+		DZA65_RS18835	0.85	+0.7
4,067,944	-		DZA65_RS18835	0.85	-0.8
4,067,944	-		DZA65_RS18835	0.85	+1.0
4,067,944	-		DZA65_RS18835	0.85	-0.2
4,067,944	-		DZA65_RS18835	0.85	-0.1
4,067,983	+		DZA65_RS18835	0.87	+0.5
4,067,983	+		DZA65_RS18835	0.87	-0.2
4,067,983	+		DZA65_RS18835	0.87	-1.0
4,067,984	-		DZA65_RS18835	0.87	+0.2
4,068,217	+				-0.5
4,068,363	+				+1.5
4,068,363	+				-0.4
4,068,363	+				-0.4
4,068,364	-				+0.7
4,068,364	-				+0.2
4,068,364	-				+0.5
4,068,364	-				-2.9
4,068,368	+				+0.3
4,068,368	+				+0.1
4,068,368	+				+1.1
4,068,368	+				+0.1
4,068,368	+				+0.5
4,068,369	-				+0.3
4,068,369	-				+0.5
4,068,369	-				-1.7
4,068,369	-				-0.9
4,068,370	+				+0.8
4,068,370	+				-0.9
4,068,370	+				-0.2
4,068,370	+				+0.3
4,068,370	+				-0.8
4,068,370	+				-2.0
4,068,370	+				+0.2
4,068,370	+				-0.2
4,068,371	-				-1.0
4,068,371	-				+0.5
4,068,371	-				+0.3
4,068,371	-				-1.7
4,068,371	-				-0.1
4,068,371	-				+0.2
4,068,373	+				-0.1
4,068,373	+				-2.3
4,068,373	+				+0.2
4,068,373	+				-2.0
4,068,373	+				+0.0
4,068,374	-				-0.7
4,068,374	-				+0.3
4,068,393	-				-2.3
4,068,426	+				+2.0
4,068,426	+				+0.5
4,068,426	+				-1.1
4,068,427	-				-1.1
4,068,427	-				+0.9
4,068,427	-				-0.1
4,068,427	-				+1.6
4,068,427	-				-0.3
4,068,427	-				+0.2
4,068,427	-				-0.8
4,068,444	-				-0.1
4,068,452	+				-0.8
4,068,453	-				-0.5
4,068,453	-				-1.5
4,068,456	+				-0.9
4,068,456	+				+0.5
4,068,457	-				-0.4
4,068,465	-				+0.8
4,068,467	+				+2.8
4,068,468	-				-0.8
4,068,468	-				-0.4
4,068,481	-				-0.8
4,068,502	+				+0.5
4,068,502	+				-0.1
4,068,523	+		DZA65_RS18840	0.10	-1.7
4,068,524	-		DZA65_RS18840	0.11	-0.1
4,068,662	+		DZA65_RS18840	0.36	-0.3
4,068,663	-		DZA65_RS18840	0.36	-1.2
4,068,663	-		DZA65_RS18840	0.36	+0.1
4,068,663	-		DZA65_RS18840	0.36	+0.5
4,068,663	-		DZA65_RS18840	0.36	+0.0
4,068,666	+		DZA65_RS18840	0.36	-0.2
4,068,667	-		DZA65_RS18840	0.37	-1.0
4,068,678	+		DZA65_RS18840	0.39	-0.7
4,068,679	-		DZA65_RS18840	0.39	-0.5
4,068,679	-		DZA65_RS18840	0.39	+0.0
4,068,682	+		DZA65_RS18840	0.39	-1.8
4,068,704	+		DZA65_RS18840	0.43	-0.3
4,068,835	+		DZA65_RS18840	0.67	-0.9
4,068,836	-		DZA65_RS18840	0.67	-3.1
4,068,841	+		DZA65_RS18840	0.68	-0.9
4,068,842	-		DZA65_RS18840	0.68	-1.5
4,068,902	-		DZA65_RS18840	0.79	-2.0
4,068,937	-		DZA65_RS18840	0.86	+0.0
4,069,037	+				-0.0
4,069,051	+				+1.1
4,069,051	+				+0.0
4,069,053	+				+0.7
4,069,054	-				+0.9
4,069,054	-				+0.1
4,069,063	+				-2.3
4,069,100	-				-0.5
4,069,207	+		DZA65_RS18845	0.20	-0.5
4,069,208	-				+0.5
4,069,211	+		DZA65_RS18845	0.20	+1.5
4,069,211	+		DZA65_RS18845	0.20	-0.2
4,069,212	-		DZA65_RS18845	0.20	-0.1
4,069,212	-		DZA65_RS18845	0.20	+0.7
4,069,212	-		DZA65_RS18845	0.20	-0.9
4,069,212	-		DZA65_RS18845	0.20	+1.1
4,069,263	-		DZA65_RS18845	0.25	+1.0
4,069,281	+		DZA65_RS18845	0.27	-0.1
4,069,293	-		DZA65_RS18845	0.28	-0.1
4,069,293	-		DZA65_RS18845	0.28	-0.1
4,069,325	+		DZA65_RS18845	0.31	-0.5
4,069,328	+		DZA65_RS18845	0.32	-0.1
4,069,379	+		DZA65_RS18845	0.37	-1.0
4,069,421	+		DZA65_RS18845	0.41	+1.1
4,069,432	-		DZA65_RS18845	0.42	-0.4
4,069,557	-		DZA65_RS18845	0.55	+1.2
4,069,561	+		DZA65_RS18845	0.55	-1.2
4,069,589	-		DZA65_RS18845	0.58	-0.4
4,069,668	-		DZA65_RS18845	0.66	-1.0
4,069,724	+		DZA65_RS18845	0.71	-0.2
4,069,753	-		DZA65_RS18845	0.74	+0.3
4,069,846	-		DZA65_RS18845	0.84	+0.5
4,069,882	+		DZA65_RS18845	0.87	-1.4
4,069,884	+		DZA65_RS18845	0.87	-1.9
4,069,884	+		DZA65_RS18845	0.87	-0.7
4,069,884	+		DZA65_RS18845	0.87	+0.3
4,069,885	-		DZA65_RS18845	0.87	-2.0
4,069,885	-		DZA65_RS18845	0.87	-0.0
4,070,010	-				-0.4
4,070,012	+				+1.7
4,070,012	+				+0.6
4,070,013	-				+0.0
4,070,014	+				-0.0
4,070,014	+				+1.5
4,070,014	+				-0.7
4,070,014	+				+2.8
4,070,014	+				+0.0
4,070,014	+				-1.3