Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,010,021	-		DZA65_RS18615	0.34	-1.9
4,010,038	+		DZA65_RS18615	0.35	+0.9
4,010,038	+		DZA65_RS18615	0.35	+0.9
4,010,049	+		DZA65_RS18615	0.37	+0.2
4,010,049	+		DZA65_RS18615	0.37	-0.4
4,010,049	+		DZA65_RS18615	0.37	-1.4
4,010,049	+		DZA65_RS18615	0.37	-0.7
4,010,050	-		DZA65_RS18615	0.37	+0.6
4,010,050	-		DZA65_RS18615	0.37	-0.1
4,010,127	+		DZA65_RS18615	0.46	-1.6
4,010,134	+		DZA65_RS18615	0.46	-0.7
4,010,134	+		DZA65_RS18615	0.46	-0.0
4,010,134	+		DZA65_RS18615	0.46	-0.2
4,010,135	-		DZA65_RS18615	0.46	+1.2
4,010,135	-				-0.6
4,010,167	-		DZA65_RS18615	0.50	+2.4
4,010,309	+		DZA65_RS18615	0.66	-0.6
4,010,309	+		DZA65_RS18615	0.66	+0.4
4,010,334	-		DZA65_RS18615	0.69	-0.2
4,010,334	-		DZA65_RS18615	0.69	+0.1
4,010,408	+		DZA65_RS18615	0.77	+0.3
4,010,408	+		DZA65_RS18615	0.77	+0.4
4,010,408	+		DZA65_RS18615	0.77	-0.0
4,010,408	+		DZA65_RS18615	0.77	+0.2
4,010,408	+		DZA65_RS18615	0.77	-0.0
4,010,408	+		DZA65_RS18615	0.77	+0.5
4,010,408	+		DZA65_RS18615	0.77	-0.4
4,010,408	+		DZA65_RS18615	0.77	-0.3
4,010,408	+		DZA65_RS18615	0.77	-0.9
4,010,408	+		DZA65_RS18615	0.77	+0.4
4,010,408	+		DZA65_RS18615	0.77	-0.1
4,010,408	+		DZA65_RS18615	0.77	-2.7
4,010,408	+		DZA65_RS18615	0.77	+1.0
4,010,408	+		DZA65_RS18615	0.77	+0.7
4,010,408	+		DZA65_RS18615	0.77	-0.2
4,010,408	+		DZA65_RS18615	0.77	-0.1
4,010,408	+		DZA65_RS18615	0.77	+0.3
4,010,408	+		DZA65_RS18615	0.77	+1.6
4,010,408	+		DZA65_RS18615	0.77	+1.0
4,010,408	+		DZA65_RS18615	0.77	-0.1
4,010,408	+		DZA65_RS18615	0.77	-1.0
4,010,408	+		DZA65_RS18615	0.77	+0.0
4,010,408	+		DZA65_RS18615	0.77	-1.1
4,010,408	+		DZA65_RS18615	0.77	-0.7
4,010,408	+		DZA65_RS18615	0.77	+0.6
4,010,408	+		DZA65_RS18615	0.77	-1.4
4,010,408	+		DZA65_RS18615	0.77	-0.9
4,010,408	+		DZA65_RS18615	0.77	+0.4
4,010,408	+		DZA65_RS18615	0.77	+0.6
4,010,408	+		DZA65_RS18615	0.77	-2.1
4,010,409	-		DZA65_RS18615	0.77	+0.4
4,010,409	-				+2.4
4,010,409	-		DZA65_RS18615	0.77	-0.4
4,010,409	-		DZA65_RS18615	0.77	-0.7
4,010,409	-		DZA65_RS18615	0.77	-1.6
4,010,409	-		DZA65_RS18615	0.77	+0.2
4,010,409	-		DZA65_RS18615	0.77	+0.5
4,010,409	-		DZA65_RS18615	0.77	+0.4
4,010,409	-		DZA65_RS18615	0.77	+0.7
4,010,409	-		DZA65_RS18615	0.77	-0.7
4,010,409	-		DZA65_RS18615	0.77	+0.7
4,010,409	-		DZA65_RS18615	0.77	+0.3
4,010,409	-		DZA65_RS18615	0.77	+1.9
4,010,409	-		DZA65_RS18615	0.77	-0.6
4,010,409	-		DZA65_RS18615	0.77	-2.7
4,010,409	-		DZA65_RS18615	0.77	+0.9
4,010,409	-		DZA65_RS18615	0.77	-2.1
4,010,409	-		DZA65_RS18615	0.77	+0.4
4,010,409	-		DZA65_RS18615	0.77	+0.1
4,010,409	-		DZA65_RS18615	0.77	+2.1
4,010,409	-		DZA65_RS18615	0.77	-1.4
4,010,409	-		DZA65_RS18615	0.77	+1.7
4,010,409	-		DZA65_RS18615	0.77	+0.6
4,010,409	-		DZA65_RS18615	0.77	+0.1
4,010,409	-		DZA65_RS18615	0.77	-0.6
4,010,409	-		DZA65_RS18615	0.77	-0.4
4,010,410	+		DZA65_RS18615	0.78	+0.3
4,010,410	+		DZA65_RS18615	0.78	-0.2
4,010,411	-		DZA65_RS18615	0.78	+0.1
4,010,450	+		DZA65_RS18615	0.82	-1.0
4,010,450	+		DZA65_RS18615	0.82	-1.1
4,010,450	+		DZA65_RS18615	0.82	-0.9
4,010,450	+		DZA65_RS18615	0.82	+0.6
4,010,450	+		DZA65_RS18615	0.82	+1.1
4,010,451	-		DZA65_RS18615	0.82	+1.7
4,010,451	-		DZA65_RS18615	0.82	-3.3
4,010,451	-		DZA65_RS18615	0.82	-0.4
4,010,451	-		DZA65_RS18615	0.82	-0.4
4,010,451	-		DZA65_RS18615	0.82	-1.0
4,010,451	-		DZA65_RS18615	0.82	+0.3
4,010,451	-		DZA65_RS18615	0.82	+0.0
4,010,451	-		DZA65_RS18615	0.82	+0.3
4,010,508	+		DZA65_RS18615	0.89	-1.6
4,010,508	+		DZA65_RS18615	0.89	-0.6
4,010,508	+		DZA65_RS18615	0.89	+0.3
4,010,508	+		DZA65_RS18615	0.89	+0.6
4,010,508	+		DZA65_RS18615	0.89	-1.3
4,010,508	+		DZA65_RS18615	0.89	+1.6
4,010,509	-				+0.4
4,010,509	-		DZA65_RS18615	0.89	-2.1
4,010,509	-		DZA65_RS18615	0.89	-2.6
4,010,509	-		DZA65_RS18615	0.89	-1.3
4,010,509	-		DZA65_RS18615	0.89	+0.4
4,010,509	-		DZA65_RS18615	0.89	+0.3
4,010,516	+		DZA65_RS18615	0.89	-0.8
4,010,516	+		DZA65_RS18615	0.89	-0.5
4,010,516	+		DZA65_RS18615	0.89	-0.0
4,010,516	+		DZA65_RS18615	0.89	+0.4
4,010,516	+		DZA65_RS18615	0.89	+0.7
4,010,516	+		DZA65_RS18615	0.89	-0.5
4,010,516	+		DZA65_RS18615	0.89	-1.2
4,010,517	-		DZA65_RS18615	0.90	-0.6
4,010,517	-		DZA65_RS18615	0.90	-0.6
4,010,538	+				-1.1
4,010,538	+				-0.2
4,010,538	+				-0.6
4,010,538	+				+0.2
4,010,538	+				-1.1
4,010,539	-				+0.3
4,010,539	-				+0.4
4,010,546	+				+1.4
4,010,546	+				+1.4
4,010,546	+				-0.0
4,010,546	+				-0.6
4,010,547	-				-0.9
4,010,547	-				-0.9
4,010,547	-				-0.9
4,010,547	-				+0.4
4,010,547	-				-2.7
4,010,549	+				-0.6
4,010,549	+				-0.6
4,010,549	+				+0.7
4,010,550	-				-0.5
4,010,560	+				+0.1
4,010,560	+				+1.1
4,010,561	-				-0.0
4,010,701	+				-0.6
4,010,702	-				+0.1
4,010,703	+				-0.3
4,010,712	+				-1.8
4,010,712	+				-1.3
4,010,712	+				-1.6
4,010,713	-				-1.1
4,010,739	+				-0.9
4,010,740	-				+0.2
4,010,740	-				+0.7
4,010,760	+				-0.2
4,010,760	+				-0.3
4,010,760	+				-0.6
4,010,760	+				-0.1
4,010,760	+				-0.8
4,010,760	+				-0.9
4,010,760	+				-1.4
4,010,760	+				-0.0
4,010,760	+				-0.3
4,010,760	+				-0.0
4,010,760	+				+0.1
4,010,761	-				-0.8
4,010,761	-				-0.9
4,010,761	-				-0.7
4,010,761	-				-1.1
4,010,761	-				-0.7
4,010,761	-				-0.5
4,010,761	-				+0.4
4,010,761	-				+0.2
4,010,761	-				-0.1
4,010,761	-				-1.6
4,010,761	-				-2.4
4,010,769	-				-1.1
4,010,769	-				-2.1
4,010,769	-				+0.9
4,010,815	+				-1.0
4,010,824	+				+0.7
4,010,824	+				+0.8
4,010,825	+				-0.4
4,010,826	+				-0.1
4,010,826	+				-0.2
4,010,826	+				-1.0
4,010,826	+				+0.1
4,010,826	+				+0.8
4,010,826	+				+0.4
4,010,826	+				+0.3
4,010,826	+				-0.3
4,010,826	+				-1.3
4,010,826	+				-0.6
4,010,826	+				-0.9
4,010,826	+				-0.2
4,010,826	+				-0.6
4,010,826	+				+0.4
4,010,828	+				-0.7
4,010,828	+				-0.4
4,010,828	+				-1.6
4,010,828	+				-0.0
4,010,828	+				-2.6
4,010,828	+				-1.0
4,010,828	+				-1.7
4,010,828	+				-0.3
4,010,828	+				+1.2
4,010,828	+				-0.2
4,010,828	+				-0.8
4,010,828	+				+0.4
4,010,828	+				+0.1
4,010,828	+				+0.8
4,010,828	+				-0.1
4,010,828	+				+0.0
4,010,828	+				-0.5
4,010,828	+				+0.3
4,010,828	+				+0.4
4,010,828	+				-2.1
4,010,828	+				+0.1
4,010,845	+				+0.1
4,010,845	+				+0.4
4,010,845	+				-1.1
4,010,845	+				+0.6
4,010,845	+				-0.6
4,010,845	+				+0.0
4,010,845	+				+0.2
4,010,846	-				-1.3
4,010,846	-				-0.1
4,010,846	-				-0.6
4,010,846	-				-1.1
4,010,846	-				-0.0
4,010,847	+				-1.1
4,010,847	+				+0.3
4,010,847	+				-0.1
4,010,848	-				+0.1
4,010,848	-				-0.4
4,010,866	+				+0.8
4,010,876	+				+1.4
4,010,876	+				+0.4
4,010,877	-				-2.6
4,010,877	-				-0.9
4,010,918	+				+0.2
4,010,918	+				+0.8
4,010,966	+				+0.8
4,010,966	+				+0.9
4,010,967	-				-1.1
4,010,967	-				-0.3
4,011,047	+				+1.9
4,011,048	-				+1.3
4,011,048	-				-0.7
4,011,145	-		DZA65_RS18620	0.14	-1.9
4,011,157	+		DZA65_RS18620	0.16	-0.9
4,011,157	+		DZA65_RS18620	0.16	-0.4
4,011,157	+		DZA65_RS18620	0.16	-0.9
4,011,158	-		DZA65_RS18620	0.16	-0.3
4,011,158	-		DZA65_RS18620	0.16	+0.3
4,011,205	+		DZA65_RS18620	0.20	-0.6
4,011,206	-		DZA65_RS18620	0.20	-1.2
4,011,214	+		DZA65_RS18620	0.21	+0.1
4,011,215	-		DZA65_RS18620	0.21	-1.6
4,011,215	-		DZA65_RS18620	0.21	-0.6
4,011,324	+		DZA65_RS18620	0.32	+0.1
4,011,325	-		DZA65_RS18620	0.32	+0.0
4,011,325	-		DZA65_RS18620	0.32	+0.4
4,011,474	+		DZA65_RS18620	0.46	-1.0
4,011,480	+		DZA65_RS18620	0.47	-2.1
4,011,480	+		DZA65_RS18620	0.47	-0.5
4,011,480	+		DZA65_RS18620	0.47	+0.1
4,011,480	+		DZA65_RS18620	0.47	-0.2
4,011,480	+		DZA65_RS18620	0.47	+0.3
4,011,480	+		DZA65_RS18620	0.47	+0.4
4,011,480	+		DZA65_RS18620	0.47	-1.1
4,011,480	+		DZA65_RS18620	0.47	-2.9
4,011,480	+		DZA65_RS18620	0.47	+0.6
4,011,480	+		DZA65_RS18620	0.47	-2.4
4,011,480	+		DZA65_RS18620	0.47	-1.0
4,011,481	-		DZA65_RS18620	0.47	-0.6
4,011,481	-		DZA65_RS18620	0.47	+0.4
4,011,481	-		DZA65_RS18620	0.47	-0.1
4,011,481	-		DZA65_RS18620	0.47	+0.2
4,011,484	+		DZA65_RS18620	0.47	-0.3
4,011,485	-		DZA65_RS18620	0.47	-0.9
4,011,537	+		DZA65_RS18620	0.52	-0.4
4,011,548	+		DZA65_RS18620	0.53	-1.0
4,011,549	-		DZA65_RS18620	0.54	-0.8
4,011,549	-		DZA65_RS18620	0.54	+1.1
4,011,847	+		DZA65_RS18620	0.82	-2.1
4,011,847	+		DZA65_RS18620	0.82	-0.1
4,011,847	+		DZA65_RS18620	0.82	+0.8
4,011,847	+		DZA65_RS18620	0.82	+1.3
4,011,847	+		DZA65_RS18620	0.82	-1.1
4,011,848	-		DZA65_RS18620	0.82	-0.8
4,011,848	-		DZA65_RS18620	0.82	-2.6
4,011,848	-		DZA65_RS18620	0.82	-1.1
4,011,848	-		DZA65_RS18620	0.82	-0.6
4,011,848	-		DZA65_RS18620	0.82	+0.4
4,011,848	-		DZA65_RS18620	0.82	-0.6
4,011,848	-		DZA65_RS18620	0.82	-0.2
4,011,848	-		DZA65_RS18620	0.82	+0.1
4,011,848	-		DZA65_RS18620	0.82	-2.1
4,011,848	-		DZA65_RS18620	0.82	-0.8
4,011,848	-		DZA65_RS18620	0.82	+0.1
4,011,848	-		DZA65_RS18620	0.82	+2.0
4,011,881	+		DZA65_RS18620	0.86	+1.3
4,011,881	+		DZA65_RS18620	0.86	+0.2
4,011,882	-		DZA65_RS18620	0.86	+1.0
4,011,901	-		DZA65_RS18620	0.88	-0.6
4,011,901	-		DZA65_RS18620	0.88	+0.2
4,011,996	-				+1.3
4,011,996	-				+0.4
4,011,996	-				-1.1
4,012,117	-				+0.0
4,012,135	+				+1.2
4,012,135	+				-0.1
4,012,135	+				-0.5
4,012,136	-				+0.6
4,012,136	-				-0.8
4,012,136	-				-0.1
4,012,136	-				-0.9
4,012,136	-				+1.1
4,012,136	-				+0.4
4,012,136	-				-0.6
4,012,138	+				+0.9
4,012,176	+				-1.1
4,012,176	+				-0.6
4,012,176	+				-0.6
4,012,177	-				+0.3
4,012,177	-				-0.7
4,012,253	+		DZA65_RS18625	0.12	+0.2
4,012,253	+		DZA65_RS18625	0.12	-2.4
4,012,254	-		DZA65_RS18625	0.12	-0.3
4,012,444	-		DZA65_RS18625	0.81	-0.2
4,012,449	+		DZA65_RS18625	0.83	-0.6
4,012,449	+		DZA65_RS18625	0.83	+0.3
4,012,449	+		DZA65_RS18625	0.83	+0.9
4,012,449	+		DZA65_RS18625	0.83	-1.9
4,012,449	+		DZA65_RS18625	0.83	+0.3
4,012,449	+		DZA65_RS18625	0.83	-0.1
4,012,449	+		DZA65_RS18625	0.83	+0.8
4,012,450	-		DZA65_RS18625	0.83	-0.7
4,012,461	+		DZA65_RS18625	0.87	-1.2
4,012,462	-		DZA65_RS18625	0.87	+1.4
4,012,464	-		DZA65_RS18625	0.88	-0.4
4,012,464	-		DZA65_RS18625	0.88	-0.9
4,012,464	-		DZA65_RS18625	0.88	+1.9
4,012,494	+				-0.6
4,012,494	+				+0.1
4,012,494	+				+0.4
4,012,528	-				-0.6
4,012,535	+				+0.7
4,012,535	+				+0.3
4,012,536	-				-0.3
4,012,536	-				+0.2
4,012,602	+				-1.6
4,012,602	+				+0.9
4,012,603	-				-2.6
4,012,603	-				+0.1
4,012,650	+				-0.1
4,012,650	+				+0.4
4,012,650	+				-0.6
4,012,650	+				-0.6
4,012,651	-				-0.0
4,012,651	-				-0.8
4,012,651	-				+0.4
4,012,654	+				+0.2
4,012,654	+				-1.0
4,012,654	+				-0.7
4,012,654	+				+0.5
4,012,654	+				+0.9
4,012,654	+				+0.0
4,012,655	-				+0.3
4,012,655	-				+0.9
4,012,655	-				-0.6
4,012,655	-				+0.4
4,012,655	-				+0.3
4,012,655	-				+0.6
4,012,655	-				+0.1
4,012,655	-				+0.9
4,012,655	-				-0.0
4,012,656	+				-0.6
4,012,657	-				+0.4
4,012,657	-				+0.1
4,012,657	-				-0.1
4,012,712	+				-0.0
4,012,712	+				-0.1
4,012,712	+				+0.4
4,012,712	+				-0.0
4,012,712	+				+1.3
4,012,712	+				+0.3
4,012,712	+				-0.6
4,012,712	+				+1.2
4,012,712	+				+0.2
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