Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,906,039	-				+0.1
3,906,078	+				-0.3
3,906,079	-				-0.0
3,906,115	+				+0.5
3,906,182	-				-2.0
3,906,313	+		DZA65_RS18140	0.13	+1.2
3,906,314	-		DZA65_RS18140	0.13	+1.4
3,906,314	-		DZA65_RS18140	0.13	+1.0
3,906,314	-		DZA65_RS18140	0.13	-0.6
3,906,494	+		DZA65_RS18140	0.35	+0.1
3,906,494	+		DZA65_RS18140	0.35	+0.2
3,906,494	+		DZA65_RS18140	0.35	+0.6
3,906,494	+		DZA65_RS18140	0.35	-0.2
3,906,494	+		DZA65_RS18140	0.35	-0.3
3,906,495	-		DZA65_RS18140	0.36	-0.1
3,906,495	-		DZA65_RS18140	0.36	+0.2
3,906,495	-				-0.6
3,906,495	-		DZA65_RS18140	0.36	+0.8
3,906,495	-		DZA65_RS18140	0.36	+0.2
3,906,495	-		DZA65_RS18140	0.36	-0.4
3,906,495	-		DZA65_RS18140	0.36	+0.2
3,906,564	+		DZA65_RS18140	0.44	-0.2
3,906,600	+		DZA65_RS18140	0.49	+0.8
3,906,600	+		DZA65_RS18140	0.49	+0.6
3,906,664	-		DZA65_RS18140	0.57	+0.4
3,906,709	-		DZA65_RS18140	0.62	-0.9
3,906,709	-		DZA65_RS18140	0.62	-0.2
3,906,790	-		DZA65_RS18140	0.73	+0.3
3,906,797	+		DZA65_RS18140	0.73	-0.6
3,906,797	+		DZA65_RS18140	0.73	+0.4
3,906,798	-		DZA65_RS18140	0.74	-0.6
3,906,798	-		DZA65_RS18140	0.74	+1.2
3,906,881	+		DZA65_RS18140	0.84	+0.0
3,906,881	+		DZA65_RS18140	0.84	+0.4
3,906,881	+		DZA65_RS18140	0.84	+0.3
3,906,881	+		DZA65_RS18140	0.84	+0.2
3,906,881	+		DZA65_RS18140	0.84	-0.2
3,906,882	-		DZA65_RS18140	0.84	-2.7
3,906,882	-		DZA65_RS18140	0.84	-0.3
3,906,882	-		DZA65_RS18140	0.84	-0.6
3,906,900	-		DZA65_RS18140	0.86	+0.6
3,906,900	-		DZA65_RS18140	0.86	-1.9
3,906,983	-				+0.8
3,906,983	-				+0.4
3,906,983	-				+0.1
3,906,983	-				+0.4
3,907,008	+				+0.4
3,907,008	+				-1.7
3,907,008	+				-1.6
3,907,009	-				+0.0
3,907,012	-				+0.4
3,907,012	-				-1.0
3,907,012	-				+0.4
3,907,012	-				-2.2
3,907,031	+				-0.4
3,907,032	-				-0.6
3,907,032	-				+0.2
3,907,053	+				-0.9
3,907,058	+				-1.2
3,907,061	+				-0.4
3,907,061	+				+2.2
3,907,061	+				-0.6
3,907,061	+				+1.0
3,907,061	+				+0.3
3,907,061	+				+0.6
3,907,062	-				-0.4
3,907,062	-				+0.4
3,907,062	-				-0.1
3,907,071	-				+1.1
3,907,157	+				-0.3
3,907,157	+				+0.3
3,907,157	+				-0.3
3,907,157	+				+0.0
3,907,157	+				+0.4
3,907,157	+				-0.4
3,907,157	+				-1.9
3,907,158	-				-0.6
3,907,158	-				-2.0
3,907,158	-				+0.6
3,907,300	+		DZA65_RS18145	0.10	-1.4
3,907,300	+		DZA65_RS18145	0.10	+0.0
3,907,301	-		DZA65_RS18145	0.10	+1.7
3,907,301	-		DZA65_RS18145	0.10	-0.3
3,907,303	+		DZA65_RS18145	0.10	-1.2
3,907,303	+		DZA65_RS18145	0.10	+1.7
3,907,303	+		DZA65_RS18145	0.10	-0.8
3,907,304	-		DZA65_RS18145	0.10	-3.0
3,907,304	-		DZA65_RS18145	0.10	-0.6
3,907,304	-		DZA65_RS18145	0.10	+0.1
3,907,304	-		DZA65_RS18145	0.10	-0.2
3,907,304	-		DZA65_RS18145	0.10	-0.7
3,907,304	-		DZA65_RS18145	0.10	-0.1
3,907,444	-		DZA65_RS18145	0.17	-0.9
3,907,446	+		DZA65_RS18145	0.17	-0.8
3,907,446	+		DZA65_RS18145	0.17	+0.0
3,907,447	-		DZA65_RS18145	0.17	-1.4
3,907,447	-		DZA65_RS18145	0.17	-0.2
3,907,447	-		DZA65_RS18145	0.17	+0.7
3,907,642	-		DZA65_RS18145	0.25	+1.3
3,907,654	-		DZA65_RS18145	0.26	+0.2
3,907,712	+		DZA65_RS18145	0.29	-0.4
3,907,713	-		DZA65_RS18145	0.29	-0.1
3,907,713	-		DZA65_RS18145	0.29	-1.6
3,907,801	-		DZA65_RS18145	0.33	-0.6
3,907,868	+		DZA65_RS18145	0.36	+0.1
3,907,869	-		DZA65_RS18145	0.36	+0.6
3,907,869	-		DZA65_RS18145	0.36	-0.1
3,907,869	-		DZA65_RS18145	0.36	-0.2
3,907,869	-		DZA65_RS18145	0.36	-0.6
3,907,930	+		DZA65_RS18145	0.38	-1.2
3,907,930	+		DZA65_RS18145	0.38	+1.1
3,907,931	-		DZA65_RS18145	0.38	-0.2
3,907,931	-		DZA65_RS18145	0.38	+0.4
3,907,931	-				+1.4
3,907,931	-		DZA65_RS18145	0.38	+1.4
3,907,956	-		DZA65_RS18145	0.39	-0.5
3,907,956	-		DZA65_RS18145	0.39	+1.8