Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS16705 and DZA65_RS16710 are separated by 97 nucleotides DZA65_RS16710 and DZA65_RS16715 are separated by 25 nucleotides DZA65_RS16715 and DZA65_RS16720 are separated by 24 nucleotides
DZA65_RS16705: DZA65_RS16705 - co-chaperone HscB, at 3,605,686 to 3,606,204
_RS16705
DZA65_RS16710: DZA65_RS16710 - iron-sulfur cluster assembly protein IscA, at 3,606,302 to 3,606,625
_RS16710
DZA65_RS16715: DZA65_RS16715 - Fe-S cluster assembly scaffold IscU, at 3,606,651 to 3,607,034
_RS16715
DZA65_RS16720: DZA65_RS16720 - cysteine desulfurase, at 3,607,059 to 3,608,273
_RS16720
Position (kb)
3606
3607
3608 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3605.688 kb on - strand at 3605.688 kb on - strand at 3605.688 kb on - strand at 3605.688 kb on - strand at 3605.759 kb on - strand, within DZA65_RS16705 at 3605.764 kb on - strand, within DZA65_RS16705 at 3605.989 kb on + strand, within DZA65_RS16705 at 3605.994 kb on + strand, within DZA65_RS16705 at 3605.994 kb on + strand, within DZA65_RS16705 at 3605.994 kb on + strand, within DZA65_RS16705 at 3605.995 kb on - strand, within DZA65_RS16705 at 3605.995 kb on - strand, within DZA65_RS16705 at 3605.995 kb on - strand, within DZA65_RS16705 at 3605.996 kb on + strand, within DZA65_RS16705 at 3605.996 kb on + strand, within DZA65_RS16705 at 3605.997 kb on - strand, within DZA65_RS16705 at 3606.061 kb on + strand, within DZA65_RS16705 at 3606.187 kb on + strand at 3606.193 kb on - strand at 3606.204 kb on + strand at 3606.205 kb on - strand at 3606.205 kb on - strand at 3606.347 kb on - strand, within DZA65_RS16710 at 3606.414 kb on + strand, within DZA65_RS16710 at 3606.415 kb on - strand, within DZA65_RS16710 at 3606.415 kb on - strand, within DZA65_RS16710 at 3606.436 kb on + strand, within DZA65_RS16710 at 3606.507 kb on + strand, within DZA65_RS16710 at 3606.636 kb on + strand at 3606.674 kb on - strand at 3606.939 kb on + strand, within DZA65_RS16715 at 3607.061 kb on - strand at 3607.061 kb on - strand at 3607.061 kb on - strand at 3607.061 kb on - strand at 3607.061 kb on - strand at 3607.061 kb on - strand at 3607.061 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,605,688 - -1.2 3,605,688 - +0.4 3,605,688 - -1.6 3,605,688 - +0.2 3,605,759 - DZA65_RS16705 0.14 +0.2 3,605,764 - DZA65_RS16705 0.15 -2.9 3,605,989 + DZA65_RS16705 0.58 -0.6 3,605,994 + DZA65_RS16705 0.59 -1.2 3,605,994 + DZA65_RS16705 0.59 -4.3 3,605,994 + DZA65_RS16705 0.59 -0.6 3,605,995 - DZA65_RS16705 0.60 -1.4 3,605,995 - DZA65_RS16705 0.60 -0.8 3,605,995 - DZA65_RS16705 0.60 -1.8 3,605,996 + DZA65_RS16705 0.60 -2.7 3,605,996 + DZA65_RS16705 0.60 -2.6 3,605,997 - DZA65_RS16705 0.60 -0.2 3,606,061 + DZA65_RS16705 0.72 -0.4 3,606,187 + -1.6 3,606,193 - -1.9 3,606,204 + +0.4 3,606,205 - -2.7 3,606,205 - +0.4 3,606,347 - DZA65_RS16710 0.14 -0.3 3,606,414 + DZA65_RS16710 0.35 -2.4 3,606,415 - DZA65_RS16710 0.35 -0.6 3,606,415 - DZA65_RS16710 0.35 -1.6 3,606,436 + DZA65_RS16710 0.41 -2.7 3,606,507 + DZA65_RS16710 0.63 -2.2 3,606,636 + -0.6 3,606,674 - +0.4 3,606,939 + DZA65_RS16715 0.75 -1.7 3,607,061 - +0.4 3,607,061 - +0.6 3,607,061 - -1.6 3,607,061 - +0.6 3,607,061 - -2.6 3,607,061 - -0.6 3,607,061 - -3.2
Or see this region's nucleotide sequence