Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS16630 and DZA65_RS16635 are separated by 140 nucleotides DZA65_RS16635 and DZA65_RS16640 are separated by 10 nucleotides DZA65_RS16640 and DZA65_RS16645 are separated by 13 nucleotides
DZA65_RS16630: DZA65_RS16630 - ribosome biogenesis GTPase Der, at 3,589,633 to 3,591,120
_RS16630
DZA65_RS16635: DZA65_RS16635 - outer membrane protein assembly factor BamB, at 3,591,261 to 3,592,442
_RS16635
DZA65_RS16640: DZA65_RS16640 - YfgM family protein, at 3,592,453 to 3,593,073
_RS16640
DZA65_RS16645: DZA65_RS16645 - histidine--tRNA ligase, at 3,593,087 to 3,594,361
_RS16645
Position (kb)
3591
3592
3593 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3591.204 kb on - strand at 3591.204 kb on - strand at 3591.278 kb on - strand at 3591.443 kb on - strand, within DZA65_RS16635 at 3591.443 kb on - strand, within DZA65_RS16635 at 3591.529 kb on - strand at 3591.651 kb on - strand, within DZA65_RS16635 at 3591.651 kb on - strand, within DZA65_RS16635 at 3591.653 kb on - strand, within DZA65_RS16635 at 3591.665 kb on - strand, within DZA65_RS16635 at 3591.747 kb on - strand, within DZA65_RS16635 at 3592.073 kb on - strand, within DZA65_RS16635 at 3592.533 kb on - strand, within DZA65_RS16640 at 3592.533 kb on - strand, within DZA65_RS16640 at 3592.533 kb on - strand, within DZA65_RS16640 at 3592.533 kb on - strand, within DZA65_RS16640 at 3592.818 kb on - strand, within DZA65_RS16640 at 3592.905 kb on - strand, within DZA65_RS16640 at 3592.930 kb on - strand, within DZA65_RS16640 at 3593.062 kb on - strand at 3593.064 kb on - strand at 3593.064 kb on - strand at 3593.064 kb on - strand at 3593.064 kb on - strand at 3593.064 kb on - strand at 3593.089 kb on - strand at 3593.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,591,204 - -1.2 3,591,204 - +0.9 3,591,278 - -2.3 3,591,443 - DZA65_RS16635 0.15 -0.6 3,591,443 - DZA65_RS16635 0.15 +0.0 3,591,529 - +0.9 3,591,651 - DZA65_RS16635 0.33 -1.3 3,591,651 - DZA65_RS16635 0.33 -1.2 3,591,653 - DZA65_RS16635 0.33 -2.9 3,591,665 - DZA65_RS16635 0.34 -0.3 3,591,747 - DZA65_RS16635 0.41 -0.9 3,592,073 - DZA65_RS16635 0.69 -1.6 3,592,533 - DZA65_RS16640 0.13 +0.1 3,592,533 - DZA65_RS16640 0.13 -1.3 3,592,533 - DZA65_RS16640 0.13 +1.3 3,592,533 - DZA65_RS16640 0.13 +0.2 3,592,818 - DZA65_RS16640 0.59 -0.4 3,592,905 - DZA65_RS16640 0.73 -0.8 3,592,930 - DZA65_RS16640 0.77 +0.2 3,593,062 - +1.4 3,593,064 - -0.2 3,593,064 - +0.5 3,593,064 - -0.2 3,593,064 - +0.1 3,593,064 - +0.4 3,593,089 - +1.0 3,593,097 - -0.4
Or see this region's nucleotide sequence