Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,535,586	-		DZA65_RS16305	0.21	+0.7
3,535,586	-		DZA65_RS16305	0.21	+0.1
3,535,679	+		DZA65_RS16305	0.28	-1.1
3,535,679	+		DZA65_RS16305	0.28	+0.4
3,535,679	+		DZA65_RS16305	0.28	+0.1
3,535,680	-		DZA65_RS16305	0.28	-0.6
3,535,680	-		DZA65_RS16305	0.28	-0.3
3,535,759	+		DZA65_RS16305	0.35	+0.5
3,535,759	+		DZA65_RS16305	0.35	-1.6
3,535,759	+		DZA65_RS16305	0.35	-1.1
3,535,759	+		DZA65_RS16305	0.35	-0.8
3,535,759	+		DZA65_RS16305	0.35	+0.3
3,535,759	+		DZA65_RS16305	0.35	+1.0
3,535,759	+		DZA65_RS16305	0.35	+2.0
3,535,759	+		DZA65_RS16305	0.35	+1.3
3,535,759	+		DZA65_RS16305	0.35	-1.6
3,535,759	+		DZA65_RS16305	0.35	-0.3
3,535,759	+		DZA65_RS16305	0.35	+0.4
3,535,759	+		DZA65_RS16305	0.35	+0.2
3,535,759	+		DZA65_RS16305	0.35	-0.2
3,535,759	+		DZA65_RS16305	0.35	-0.6
3,535,759	+		DZA65_RS16305	0.35	-0.4
3,535,759	+		DZA65_RS16305	0.35	+0.1
3,535,759	+		DZA65_RS16305	0.35	-0.7
3,535,760	-		DZA65_RS16305	0.35	-2.2
3,535,760	-		DZA65_RS16305	0.35	+1.4
3,535,760	-		DZA65_RS16305	0.35	-0.8
3,535,760	-		DZA65_RS16305	0.35	+0.2
3,535,760	-		DZA65_RS16305	0.35	+0.4
3,535,760	-		DZA65_RS16305	0.35	+0.7
3,535,760	-		DZA65_RS16305	0.35	-1.3
3,535,760	-		DZA65_RS16305	0.35	+0.1
3,535,760	-		DZA65_RS16305	0.35	-0.3
3,535,760	-		DZA65_RS16305	0.35	+0.5
3,535,760	-		DZA65_RS16305	0.35	-0.3
3,535,760	-		DZA65_RS16305	0.35	-0.1
3,535,760	-		DZA65_RS16305	0.35	-0.3
3,535,760	-		DZA65_RS16305	0.35	+0.2
3,535,760	-		DZA65_RS16305	0.35	-1.2
3,535,760	-		DZA65_RS16305	0.35	-0.2
3,535,760	-		DZA65_RS16305	0.35	+0.0
3,535,760	-		DZA65_RS16305	0.35	+0.2
3,535,760	-				+1.1
3,535,760	-		DZA65_RS16305	0.35	+0.8
3,535,760	-		DZA65_RS16305	0.35	-0.7
3,535,802	+		DZA65_RS16305	0.38	+1.6
3,535,803	-		DZA65_RS16305	0.38	+0.2
3,535,803	-		DZA65_RS16305	0.38	+1.1
3,535,803	-		DZA65_RS16305	0.38	-1.0
3,535,807	+		DZA65_RS16305	0.38	-0.0
3,535,807	+		DZA65_RS16305	0.38	+0.0
3,535,807	+		DZA65_RS16305	0.38	+0.5
3,535,808	-		DZA65_RS16305	0.38	+0.6
3,535,892	+		DZA65_RS16305	0.45	-0.8
3,535,892	+		DZA65_RS16305	0.45	-0.3
3,535,892	+		DZA65_RS16305	0.45	-1.2
3,535,893	-				+0.1
3,535,893	-		DZA65_RS16305	0.45	-0.0
3,535,909	-		DZA65_RS16305	0.46	-0.0
3,535,909	-		DZA65_RS16305	0.46	-0.6
3,535,909	-		DZA65_RS16305	0.46	+0.1
3,535,978	-		DZA65_RS16305	0.52	-0.7
3,535,978	-		DZA65_RS16305	0.52	-0.3
3,535,978	-		DZA65_RS16305	0.52	+0.1
3,536,049	-		DZA65_RS16305	0.58	+1.7
3,536,108	+		DZA65_RS16305	0.62	-0.6
3,536,108	+		DZA65_RS16305	0.62	-0.7
3,536,108	+		DZA65_RS16305	0.62	+0.6
3,536,108	+		DZA65_RS16305	0.62	+1.6
3,536,108	+		DZA65_RS16305	0.62	-0.8
3,536,108	+		DZA65_RS16305	0.62	+1.0
3,536,108	+		DZA65_RS16305	0.62	+0.2
3,536,109	-		DZA65_RS16305	0.62	+0.1
3,536,109	-		DZA65_RS16305	0.62	-0.0
3,536,116	+		DZA65_RS16305	0.63	+0.8
3,536,116	+		DZA65_RS16305	0.63	+0.2
3,536,117	-		DZA65_RS16305	0.63	+0.2
3,536,133	+		DZA65_RS16305	0.64	-0.6
3,536,133	+		DZA65_RS16305	0.64	-1.2
3,536,134	-		DZA65_RS16305	0.64	-0.2
3,536,134	-		DZA65_RS16305	0.64	-1.3
3,536,135	+		DZA65_RS16305	0.65	+0.6
3,536,215	+		DZA65_RS16305	0.71	-0.6
3,536,215	+		DZA65_RS16305	0.71	-0.1
3,536,215	+		DZA65_RS16305	0.71	-1.3
3,536,215	+		DZA65_RS16305	0.71	+1.4
3,536,215	+		DZA65_RS16305	0.71	+0.2
3,536,215	+		DZA65_RS16305	0.71	-0.2
3,536,215	+		DZA65_RS16305	0.71	-1.0
3,536,216	-		DZA65_RS16305	0.71	-0.4
3,536,216	-		DZA65_RS16305	0.71	-0.8
3,536,216	-		DZA65_RS16305	0.71	-0.6
3,536,216	-		DZA65_RS16305	0.71	+1.2
3,536,216	-		DZA65_RS16305	0.71	-0.2
3,536,216	-		DZA65_RS16305	0.71	-0.0
3,536,216	-		DZA65_RS16305	0.71	+0.3
3,536,216	-		DZA65_RS16305	0.71	-0.0
3,536,216	-		DZA65_RS16305	0.71	-0.3
3,536,248	-		DZA65_RS16305	0.74	-1.5
3,536,248	-		DZA65_RS16305	0.74	-2.4
3,536,371	-		DZA65_RS16305	0.83	-2.2
3,536,371	-		DZA65_RS16305	0.83	-1.9
3,536,371	-		DZA65_RS16305	0.83	-0.0
3,536,371	-		DZA65_RS16305	0.83	-1.2
3,536,371	-		DZA65_RS16305	0.83	-0.6
3,536,493	-				+0.2
3,536,563	+				-0.1
3,536,563	+				+0.4
3,536,563	+				-1.6
3,536,591	+				+0.2
3,536,591	+				+1.2
3,536,591	+				+0.6
3,536,592	-				+0.4
3,536,592	-				+0.9
3,536,592	-				+0.6
3,536,703	+		DZA65_RS16310	0.27	-0.1
3,536,703	+		DZA65_RS16310	0.27	-0.0
3,536,704	-		DZA65_RS16310	0.28	-1.4
3,536,704	-		DZA65_RS16310	0.28	-0.1
3,536,704	-		DZA65_RS16310	0.28	-0.6
3,536,704	-		DZA65_RS16310	0.28	+0.7
3,536,704	-		DZA65_RS16310	0.28	-0.0
3,536,936	+		DZA65_RS16310	0.78	-0.5
3,536,936	+		DZA65_RS16310	0.78	-0.4
3,536,936	+		DZA65_RS16310	0.78	-0.2
3,536,936	+		DZA65_RS16310	0.78	+0.1
3,536,936	+		DZA65_RS16310	0.78	-0.5
3,536,937	-		DZA65_RS16310	0.78	-2.4
3,536,937	-		DZA65_RS16310	0.78	-0.2
3,536,937	-		DZA65_RS16310	0.78	-0.7
3,537,012	+				-0.7
3,537,012	+				-0.9
3,537,012	+				+0.3
3,537,012	+				+0.2
3,537,012	+				-1.4
3,537,013	-				-1.9
3,537,013	-				+1.1
3,537,013	-				+0.1
3,537,036	-				-0.2
3,537,045	+				-0.2
3,537,045	+				+0.1
3,537,045	+				-0.2
3,537,045	+				-0.0
3,537,046	-				+0.4
3,537,046	-				+0.4
3,537,046	-				-0.1
3,537,060	+				-0.7
3,537,060	+				-1.9
3,537,061	-				-3.1
3,537,097	-				-0.2
3,537,108	-				+0.6
3,537,108	-				-3.2
3,537,108	-				+0.6
3,537,131	-				-2.4
3,537,134	+				-0.8
3,537,134	+				+0.1
3,537,134	+				+0.8
3,537,134	+				+0.4
3,537,134	+				+0.7
3,537,138	+				+1.0
3,537,138	+				-0.1
3,537,138	+				-2.4
3,537,139	-				+0.6
3,537,139	-				+0.8
3,537,139	-				+0.3
3,537,162	-		DZA65_RS16315	0.11	-0.8
3,537,220	-		DZA65_RS16315	0.17	+0.1
3,537,259	+		DZA65_RS16315	0.21	-2.0
3,537,259	+		DZA65_RS16315	0.21	-0.0
3,537,260	-		DZA65_RS16315	0.21	+0.4
3,537,273	-		DZA65_RS16315	0.22	+0.6
3,537,273	-		DZA65_RS16315	0.22	+0.1
3,537,309	+		DZA65_RS16315	0.26	+0.5
3,537,316	-		DZA65_RS16315	0.27	+0.4
3,537,318	+		DZA65_RS16315	0.27	-0.3
3,537,319	-		DZA65_RS16315	0.27	-0.2
3,537,348	+		DZA65_RS16315	0.30	-2.6
3,537,349	-		DZA65_RS16315	0.31	-1.6
3,537,352	+		DZA65_RS16315	0.31	+0.1
3,537,352	+		DZA65_RS16315	0.31	-0.8
3,537,352	+		DZA65_RS16315	0.31	-0.4
3,537,352	+		DZA65_RS16315	0.31	+0.0
3,537,352	+		DZA65_RS16315	0.31	+0.5
3,537,352	+		DZA65_RS16315	0.31	-0.7
3,537,352	+		DZA65_RS16315	0.31	+0.4
3,537,352	+		DZA65_RS16315	0.31	+0.6
3,537,353	-		DZA65_RS16315	0.31	-1.0
3,537,353	-		DZA65_RS16315	0.31	+0.4
3,537,353	-		DZA65_RS16315	0.31	+0.7
3,537,353	-		DZA65_RS16315	0.31	-1.3
3,537,357	+		DZA65_RS16315	0.31	-0.2
3,537,357	+		DZA65_RS16315	0.31	-1.0
3,537,357	+		DZA65_RS16315	0.31	+0.3
3,537,358	-		DZA65_RS16315	0.32	-3.1
3,537,363	-		DZA65_RS16315	0.32	-0.3
3,537,363	-		DZA65_RS16315	0.32	+0.6
3,537,375	+		DZA65_RS16315	0.33	-0.6
3,537,383	+		DZA65_RS16315	0.34	+0.1
3,537,406	-		DZA65_RS16315	0.37	+0.3
3,537,413	-		DZA65_RS16315	0.37	+1.7
3,537,413	-		DZA65_RS16315	0.37	+0.4
3,537,414	+		DZA65_RS16315	0.38	+0.3
3,537,418	-		DZA65_RS16315	0.38	+0.3
3,537,418	-		DZA65_RS16315	0.38	-1.0
3,537,418	-		DZA65_RS16315	0.38	+0.5
3,537,466	-		DZA65_RS16315	0.43	-0.4
3,537,539	-		DZA65_RS16315	0.51	+0.6
3,537,600	+		DZA65_RS16315	0.57	-0.8
3,537,600	+		DZA65_RS16315	0.57	-0.5
3,537,600	+		DZA65_RS16315	0.57	+0.4
3,537,600	+		DZA65_RS16315	0.57	+0.6
3,537,600	+		DZA65_RS16315	0.57	-0.6
3,537,601	-		DZA65_RS16315	0.58	-0.4
3,537,601	-		DZA65_RS16315	0.58	+0.2
3,537,606	+		DZA65_RS16315	0.58	+0.5
3,537,607	-		DZA65_RS16315	0.58	-0.9
3,537,610	+		DZA65_RS16315	0.59	-1.2
3,537,610	+		DZA65_RS16315	0.59	-1.6
3,537,610	+		DZA65_RS16315	0.59	+0.1
3,537,678	+		DZA65_RS16315	0.66	-1.1
3,537,679	-		DZA65_RS16315	0.66	+1.8
3,537,708	+		DZA65_RS16315	0.69	-0.1
3,537,748	+		DZA65_RS16315	0.73	-0.4
3,537,763	+		DZA65_RS16315	0.75	-0.1
3,537,802	-		DZA65_RS16315	0.79	+0.1
3,537,821	+		DZA65_RS16315	0.81	-1.1
3,537,821	+		DZA65_RS16315	0.81	+0.4
3,537,837	-		DZA65_RS16315	0.83	+0.2
3,537,843	+		DZA65_RS16315	0.83	+0.5
3,537,867	-		DZA65_RS16315	0.86	+1.4
3,537,867	-		DZA65_RS16315	0.86	+0.0
3,537,867	-		DZA65_RS16315	0.86	+0.4
3,537,869	-		DZA65_RS16315	0.86	-1.4
3,537,901	-		DZA65_RS16315	0.90	-1.5
3,537,923	-				-1.0
3,537,935	-				+0.4
3,538,004	+				-1.9
3,538,004	+				+0.2
3,538,013	+				+0.9
3,538,016	+				+1.2
3,538,017	-				+0.2