Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,312,967	+				-0.5
3,312,980	+				+0.4
3,313,054	+		DZA65_RS15270	0.15	-0.3
3,313,054	+		DZA65_RS15270	0.15	+1.6
3,313,055	-		DZA65_RS15270	0.16	-0.7
3,313,055	-		DZA65_RS15270	0.16	-2.5
3,313,106	+				+1.9
3,313,131	+		DZA65_RS15270	0.32	+0.3
3,313,131	+		DZA65_RS15270	0.32	-0.5
3,313,132	-		DZA65_RS15270	0.32	+0.7
3,313,132	-		DZA65_RS15270	0.32	+0.3
3,313,132	-		DZA65_RS15270	0.32	+0.4
3,313,132	-		DZA65_RS15270	0.32	-0.4
3,313,132	-		DZA65_RS15270	0.32	+0.7
3,313,134	+		DZA65_RS15270	0.33	-0.1
3,313,135	-		DZA65_RS15270	0.33	+0.6
3,313,272	+		DZA65_RS15270	0.63	-1.6
3,313,272	+		DZA65_RS15270	0.63	-0.5
3,313,272	+		DZA65_RS15270	0.63	-0.6
3,313,273	-		DZA65_RS15270	0.63	+0.1
3,313,273	-		DZA65_RS15270	0.63	-0.2
3,313,273	-		DZA65_RS15270	0.63	-1.1
3,313,338	+		DZA65_RS15270	0.78	+0.4
3,313,339	-		DZA65_RS15270	0.78	-0.7
3,313,376	+		DZA65_RS15270	0.86	-0.5
3,313,376	+		DZA65_RS15270	0.86	-1.3
3,313,377	-		DZA65_RS15270	0.86	+0.6
3,313,377	-		DZA65_RS15270	0.86	+0.4
3,313,377	-		DZA65_RS15270	0.86	-0.5
3,313,378	+		DZA65_RS15270	0.86	-1.5
3,313,378	+		DZA65_RS15270	0.86	+1.9
3,313,378	+		DZA65_RS15270	0.86	-1.1
3,313,378	+		DZA65_RS15270	0.86	+0.7
3,313,378	+		DZA65_RS15270	0.86	-0.4
3,313,378	+		DZA65_RS15270	0.86	-1.5
3,313,378	+		DZA65_RS15270	0.86	+0.4
3,313,378	+		DZA65_RS15270	0.86	+0.7
3,313,378	+		DZA65_RS15270	0.86	+0.4
3,313,378	+		DZA65_RS15270	0.86	-0.1
3,313,378	+		DZA65_RS15270	0.86	+0.8
3,313,379	-		DZA65_RS15270	0.87	-1.2
3,313,379	-		DZA65_RS15270	0.87	-0.1
3,313,379	-		DZA65_RS15270	0.87	+0.1
3,313,379	-		DZA65_RS15270	0.87	-0.2
3,313,379	-		DZA65_RS15270	0.87	-0.6
3,313,379	-		DZA65_RS15270	0.87	+0.2
3,313,379	-		DZA65_RS15270	0.87	+0.0
3,313,379	-		DZA65_RS15270	0.87	-0.9
3,313,379	-		DZA65_RS15270	0.87	+0.5
3,313,379	-		DZA65_RS15270	0.87	-1.6
3,313,379	-		DZA65_RS15270	0.87	+0.7
3,313,404	+				+0.0
3,313,404	+				-0.3
3,313,405	-				-0.8
3,313,405	-				-0.2
3,313,405	-				-0.4
3,313,526	+				+1.4
3,313,547	+				-0.5
3,313,547	+				+0.4
3,313,605	+		DZA65_RS15275	0.24	+0.8
3,313,746	+		DZA65_RS15275	0.82	-0.1
3,313,746	+		DZA65_RS15275	0.82	+1.2
3,313,746	+		DZA65_RS15275	0.82	-0.1
3,313,746	+		DZA65_RS15275	0.82	+0.5
3,313,746	+		DZA65_RS15275	0.82	-0.6
3,313,746	+		DZA65_RS15275	0.82	+0.9
3,313,747	-		DZA65_RS15275	0.83	-1.6
3,313,747	-		DZA65_RS15275	0.83	-1.0
3,313,747	-		DZA65_RS15275	0.83	-1.5
3,313,747	-		DZA65_RS15275	0.83	+0.5
3,313,747	-		DZA65_RS15275	0.83	-2.5
3,313,818	-				-1.2
3,313,823	+				-0.0
3,313,823	+				-0.6
3,313,823	+				+0.3
3,313,823	+				+1.4
3,313,823	+				-0.6
3,313,824	-				-2.3
3,313,824	-				-0.4
3,313,824	-				+1.1
3,313,824	-				-0.4
3,313,859	+				-0.5
3,313,880	+				-0.5
3,313,880	+				+0.0
3,313,882	+				+1.9
3,313,883	-				+0.5
3,313,889	+				-0.6
3,313,889	+				-0.9
3,313,890	-				+0.4
3,313,908	+				+0.7
3,313,908	+				-0.2
3,313,909	-				-0.6
3,313,913	+				-2.2
3,313,913	+				-0.1
3,313,913	+				+0.7
3,313,913	+				+1.1
3,313,913	+				-0.8
3,313,917	-				-0.8
3,313,926	+				+1.2
3,313,926	+				+0.2
3,313,926	+				-0.7
3,313,927	-				-0.4
3,313,927	-				-1.2
3,313,985	-				+1.8
3,314,011	-				-0.2
3,314,172	+		DZA65_RS15280	0.23	+0.4
3,314,177	+		DZA65_RS15280	0.23	-1.0
3,314,177	+		DZA65_RS15280	0.23	-0.6
3,314,178	-		DZA65_RS15280	0.23	-1.8
3,314,178	-		DZA65_RS15280	0.23	+0.6
3,314,367	+		DZA65_RS15280	0.39	-1.2
3,314,368	-		DZA65_RS15280	0.39	-1.1
3,314,384	-		DZA65_RS15280	0.40	-0.6
3,314,384	-		DZA65_RS15280	0.40	-0.9
3,314,408	+		DZA65_RS15280	0.42	-0.3
3,314,408	+		DZA65_RS15280	0.42	+1.0
3,314,408	+		DZA65_RS15280	0.42	-1.2
3,314,409	-		DZA65_RS15280	0.42	-1.1
3,314,679	+		DZA65_RS15280	0.65	-2.8
3,314,679	+		DZA65_RS15280	0.65	-0.4
3,314,679	+		DZA65_RS15280	0.65	-0.6
3,314,688	-		DZA65_RS15280	0.66	+0.4
3,314,695	-		DZA65_RS15280	0.66	-1.2
3,314,766	-		DZA65_RS15280	0.72	-0.6
3,314,837	-		DZA65_RS15280	0.78	-0.4
3,314,849	-		DZA65_RS15280	0.79	-0.6
3,315,103	+				-0.6
3,315,103	+				+0.4
3,315,103	+				-0.1
3,315,104	-				-3.2
3,315,104	-				+1.4
3,315,145	+				-0.3
3,315,145	+				+0.2
3,315,145	+				+0.4
3,315,145	+				-0.9
3,315,202	+				+1.6
3,315,410	+		DZA65_RS15285	0.10	+0.4
3,315,410	+		DZA65_RS15285	0.10	+0.8
3,315,410	+		DZA65_RS15285	0.10	+0.0
3,315,410	+		DZA65_RS15285	0.10	-1.2
3,315,411	-		DZA65_RS15285	0.10	+0.5
3,315,411	-		DZA65_RS15285	0.10	-1.8
3,315,411	-		DZA65_RS15285	0.10	+0.4
3,315,411	-		DZA65_RS15285	0.10	-0.3
3,315,560	+		DZA65_RS15285	0.17	-1.2
3,315,561	-		DZA65_RS15285	0.17	+0.6
3,315,700	+		DZA65_RS15285	0.24	-0.6