Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,999,382	-				+1.1
2,999,393	+				-1.8
2,999,393	+				+0.2
2,999,393	+				+0.2
2,999,393	+				+0.6
2,999,393	+				+0.1
2,999,393	+				+0.9
2,999,393	+				+1.4
2,999,393	+				+0.2
2,999,393	+				+0.1
2,999,393	+				-0.1
2,999,393	+				-0.0
2,999,393	+				-0.3
2,999,393	+				-0.1
2,999,393	+				-2.1
2,999,394	-				+1.1
2,999,394	-				+0.2
2,999,394	-				-1.4
2,999,394	-				-1.9
2,999,394	-				-0.3
2,999,394	-				+0.2
2,999,394	-				-0.1
2,999,394	-				+0.9
2,999,394	-				+1.4
2,999,394	-				+1.3
2,999,395	+				-0.6
2,999,395	+				+0.2
2,999,395	+				+1.6
2,999,395	+				+0.6
2,999,395	+				-0.4
2,999,395	+				-0.4
2,999,395	+				+0.8
2,999,396	-				+1.2
2,999,396	-				-0.4
2,999,396	-				+0.6
2,999,396	-				+0.2
2,999,396	-				-2.4
2,999,396	-				-0.3
2,999,396	-				-0.0
2,999,396	-				+0.2
2,999,429	+				-0.9
2,999,430	-				+0.1
2,999,430	-				+1.1
2,999,432	+				+0.2
2,999,433	-				+0.4
2,999,433	-				+0.8
2,999,433	-				+0.2
2,999,457	+				+1.0
2,999,457	+				-0.3
2,999,457	+				-1.4
2,999,457	+				-1.3
2,999,458	-				-1.2
2,999,458	-				-0.3
2,999,458	-				-0.2
2,999,458	-				-0.5
2,999,458	-				-1.4
2,999,459	+				-0.6
2,999,460	-				-0.1
2,999,510	-				-0.5
2,999,543	+		DZA65_RS13970	0.12	-0.4
2,999,544	-		DZA65_RS13970	0.12	+0.7
2,999,657	+		DZA65_RS13970	0.24	+0.6
2,999,666	+		DZA65_RS13970	0.25	+0.6
2,999,667	-		DZA65_RS13970	0.25	+0.7
2,999,711	+		DZA65_RS13970	0.29	+0.5
2,999,711	+		DZA65_RS13970	0.29	+0.5
2,999,712	-		DZA65_RS13970	0.30	+1.0
2,999,712	-		DZA65_RS13970	0.30	+0.2
2,999,712	-		DZA65_RS13970	0.30	+1.1
2,999,722	-		DZA65_RS13970	0.31	+1.1
2,999,751	+		DZA65_RS13970	0.34	-0.0
2,999,751	+		DZA65_RS13970	0.34	-0.6
2,999,752	-		DZA65_RS13970	0.34	+1.0
2,999,764	-		DZA65_RS13970	0.35	-0.4
2,999,766	+		DZA65_RS13970	0.35	+0.7
2,999,766	+		DZA65_RS13970	0.35	+1.3
2,999,766	+		DZA65_RS13970	0.35	+0.7
2,999,767	-		DZA65_RS13970	0.35	+0.3
2,999,767	-		DZA65_RS13970	0.35	+1.7
2,999,767	-		DZA65_RS13970	0.35	+0.5
2,999,767	-		DZA65_RS13970	0.35	-1.1
2,999,767	-		DZA65_RS13970	0.35	+0.3
2,999,775	+		DZA65_RS13970	0.36	+0.5
2,999,775	+		DZA65_RS13970	0.36	+0.6
2,999,775	+		DZA65_RS13970	0.36	+0.0
2,999,775	+		DZA65_RS13970	0.36	+0.5
2,999,775	+		DZA65_RS13970	0.36	+1.1
2,999,776	-		DZA65_RS13970	0.36	+0.4
2,999,776	-		DZA65_RS13970	0.36	+1.1
2,999,776	-		DZA65_RS13970	0.36	-0.2
2,999,869	-		DZA65_RS13970	0.46	+0.7
2,999,869	-		DZA65_RS13970	0.46	+0.3
2,999,883	+		DZA65_RS13970	0.48	-0.2
2,999,916	+		DZA65_RS13970	0.51	+0.6
3,000,020	-		DZA65_RS13970	0.62	+1.0
3,000,158	+		DZA65_RS13970	0.76	+0.6
3,000,158	+		DZA65_RS13970	0.76	+1.7
3,000,158	+		DZA65_RS13970	0.76	-0.8
3,000,158	+		DZA65_RS13970	0.76	-0.3
3,000,158	+		DZA65_RS13970	0.76	+1.2
3,000,158	+		DZA65_RS13970	0.76	+1.2
3,000,158	+		DZA65_RS13970	0.76	+0.0
3,000,158	+		DZA65_RS13970	0.76	+0.1
3,000,158	+		DZA65_RS13970	0.76	+1.6
3,000,158	+		DZA65_RS13970	0.76	+0.1
3,000,158	+		DZA65_RS13970	0.76	+0.6
3,000,159	-		DZA65_RS13970	0.77	+1.1
3,000,159	-		DZA65_RS13970	0.77	+1.4
3,000,159	-		DZA65_RS13970	0.77	-0.5
3,000,159	-		DZA65_RS13970	0.77	+0.1
3,000,198	+		DZA65_RS13970	0.81	+0.1
3,000,225	+		DZA65_RS13970	0.83	+0.2
3,000,225	+		DZA65_RS13970	0.83	+1.5
3,000,226	-		DZA65_RS13970	0.84	-0.8
3,000,226	-		DZA65_RS13970	0.84	+1.3
3,000,226	-		DZA65_RS13970	0.84	+0.5
3,000,226	-		DZA65_RS13970	0.84	-0.1
3,000,226	-		DZA65_RS13970	0.84	+0.9
3,000,268	-		DZA65_RS13970	0.88	+0.6
3,000,310	+				-0.4
3,000,310	+				+2.1
3,000,310	+				+0.7
3,000,310	+				-0.0
3,000,310	+				+0.1
3,000,310	+				-0.3
3,000,310	+				-1.9
3,000,311	-				+0.2
3,000,311	-				-1.7
3,000,311	-				+0.4
3,000,311	-				-1.5
3,000,311	-				+1.1
3,000,311	-				-0.1
3,000,311	-				-0.2
3,000,311	-				+0.2
3,000,311	-				-0.6
3,000,311	-				-0.4
3,000,311	-				-2.1
3,000,311	-				+0.5
3,000,311	-				+0.6
3,000,330	+				+0.2
3,000,331	-				+0.7
3,000,331	-				+0.2
3,000,347	+				-1.8
3,000,347	+				+0.0
3,000,372	+				+1.2
3,000,373	-				+0.5
3,000,386	+				-0.4
3,000,386	+				+1.8
3,000,494	+				-0.1
3,000,494	+		DZA65_RS13975	0.10	+0.3
3,000,495	-		DZA65_RS13975	0.10	+1.5
3,000,500	+		DZA65_RS13975	0.11	+0.1
3,000,570	+		DZA65_RS13975	0.17	-1.6
3,000,644	+		DZA65_RS13975	0.24	+0.2
3,000,713	+		DZA65_RS13975	0.30	+0.5
3,000,713	+		DZA65_RS13975	0.30	+0.5
3,000,713	+		DZA65_RS13975	0.30	+0.5
3,000,713	+		DZA65_RS13975	0.30	+0.6
3,000,713	+		DZA65_RS13975	0.30	+0.7
3,000,714	-				+0.2
3,000,755	+		DZA65_RS13975	0.34	+0.9
3,000,755	+		DZA65_RS13975	0.34	+0.5
3,000,755	+		DZA65_RS13975	0.34	-0.1
3,000,755	+		DZA65_RS13975	0.34	-0.9
3,000,755	+		DZA65_RS13975	0.34	+0.1
3,000,755	+		DZA65_RS13975	0.34	+1.1
3,000,756	-		DZA65_RS13975	0.34	+0.2
3,000,756	-		DZA65_RS13975	0.34	+0.6
3,000,832	-		DZA65_RS13975	0.41	-0.3
3,000,832	-		DZA65_RS13975	0.41	+0.4
3,000,894	-		DZA65_RS13975	0.46	-0.3
3,000,912	+		DZA65_RS13975	0.48	+0.4
3,000,912	+		DZA65_RS13975	0.48	+1.2
3,000,913	-		DZA65_RS13975	0.48	+0.4
3,000,929	+		DZA65_RS13975	0.49	+1.6
3,000,929	+		DZA65_RS13975	0.49	+0.4
3,000,930	-		DZA65_RS13975	0.49	+0.0
3,000,930	-		DZA65_RS13975	0.49	+1.0
3,000,984	-		DZA65_RS13975	0.54	-0.4
3,000,986	+		DZA65_RS13975	0.55	+1.6
3,001,009	-		DZA65_RS13975	0.57	+0.9
3,001,056	+		DZA65_RS13975	0.61	+0.2
3,001,056	+		DZA65_RS13975	0.61	+0.5
3,001,056	+		DZA65_RS13975	0.61	-0.3
3,001,057	-		DZA65_RS13975	0.61	+0.4
3,001,057	-		DZA65_RS13975	0.61	+2.7
3,001,057	-		DZA65_RS13975	0.61	+0.4
3,001,057	-		DZA65_RS13975	0.61	+0.9
3,001,057	-		DZA65_RS13975	0.61	+0.6
3,001,057	-		DZA65_RS13975	0.61	-0.2
3,001,078	+		DZA65_RS13975	0.63	+0.6
3,001,078	+		DZA65_RS13975	0.63	+0.2
3,001,078	+		DZA65_RS13975	0.63	-0.1
3,001,078	+		DZA65_RS13975	0.63	-0.7
3,001,078	+		DZA65_RS13975	0.63	+0.4
3,001,078	+		DZA65_RS13975	0.63	+1.4
3,001,078	+		DZA65_RS13975	0.63	+0.2
3,001,079	-		DZA65_RS13975	0.63	+0.1
3,001,079	-		DZA65_RS13975	0.63	+0.6
3,001,079	-		DZA65_RS13975	0.63	+0.2
3,001,079	-		DZA65_RS13975	0.63	+0.8
3,001,152	-		DZA65_RS13975	0.69	+0.9
3,001,380	-				-0.0
3,001,397	+				+1.2
3,001,397	+				+1.6
3,001,397	+				-0.1
3,001,398	-				-2.9
3,001,398	-				+0.4
3,001,398	-				+0.0
3,001,481	+				+0.5
3,001,482	-				+3.2
3,001,482	-				+1.8
3,001,482	-				+0.3
3,001,493	+				+1.0
3,001,493	+				-0.9
3,001,493	+				+0.7
3,001,493	+				+0.8
3,001,494	-				+0.3
3,001,494	-				+0.7
3,001,494	-				+1.5
3,001,494	-				+1.2
3,001,494	-				+0.6
3,001,494	-				+0.2
3,001,494	-				+0.6
3,001,494	-				+1.5
3,001,494	-				+1.0
3,001,494	-				+0.3
3,001,494	-				-0.9
3,001,508	+				+0.9
3,001,508	+				+0.6
3,001,508	+				+0.6
3,001,509	-				+0.2
3,001,566	+				+1.8
3,001,567	-				+1.1
3,001,567	-				-0.4
3,001,571	+				+0.0
3,001,571	+				+0.7
3,001,571	+				+0.8
3,001,578	+				+0.6
3,001,586	+		DZA65_RS13980	0.11	+0.3
3,001,586	+		DZA65_RS13980	0.11	+0.6
3,001,586	+		DZA65_RS13980	0.11	-0.6
3,001,586	+		DZA65_RS13980	0.11	+1.2
3,001,586	+		DZA65_RS13980	0.11	+1.4
3,001,586	+		DZA65_RS13980	0.11	+1.4
3,001,586	+		DZA65_RS13980	0.11	-0.8
3,001,586	+		DZA65_RS13980	0.11	+1.0
3,001,586	+		DZA65_RS13980	0.11	+0.5
3,001,586	+		DZA65_RS13980	0.11	-0.3
3,001,587	-		DZA65_RS13980	0.11	+0.4
3,001,587	-		DZA65_RS13980	0.11	+0.2
3,001,587	-		DZA65_RS13980	0.11	+0.2
3,001,587	-		DZA65_RS13980	0.11	+1.1
3,001,587	-		DZA65_RS13980	0.11	+0.8
3,001,587	-		DZA65_RS13980	0.11	+0.4
3,001,587	-		DZA65_RS13980	0.11	+1.1
3,001,587	-		DZA65_RS13980	0.11	+0.5
3,001,587	-		DZA65_RS13980	0.11	-0.9
3,001,587	-		DZA65_RS13980	0.11	-0.0
3,001,587	-		DZA65_RS13980	0.11	+1.0
3,001,587	-		DZA65_RS13980	0.11	+0.1
3,001,594	-		DZA65_RS13980	0.12	+1.6
3,001,594	-		DZA65_RS13980	0.12	+0.6
3,001,622	-		DZA65_RS13980	0.16	-0.2
3,001,675	-		DZA65_RS13980	0.23	-0.6
3,001,693	-		DZA65_RS13980	0.26	-0.8
3,001,779	+		DZA65_RS13980	0.38	-0.1
3,001,779	+		DZA65_RS13980	0.38	-1.6
3,001,779	+		DZA65_RS13980	0.38	+0.2
3,001,779	+		DZA65_RS13980	0.38	+0.5
3,001,779	+		DZA65_RS13980	0.38	-1.6
3,001,780	-		DZA65_RS13980	0.38	+0.7
3,001,780	-		DZA65_RS13980	0.38	+1.7
3,001,780	-		DZA65_RS13980	0.38	+0.2
3,001,780	-		DZA65_RS13980	0.38	-0.6
3,001,780	-		DZA65_RS13980	0.38	+0.3
3,001,780	-		DZA65_RS13980	0.38	+1.2
3,001,782	+		DZA65_RS13980	0.38	+1.6
3,001,783	-		DZA65_RS13980	0.38	+1.1
3,001,833	+		DZA65_RS13980	0.45	-0.6
3,001,833	+		DZA65_RS13980	0.45	+2.2
3,001,834	-		DZA65_RS13980	0.46	+1.6
3,001,834	-		DZA65_RS13980	0.46	+0.3
3,001,968	+		DZA65_RS13980	0.64	-0.6
3,001,968	+		DZA65_RS13980	0.64	+0.6
3,001,968	+		DZA65_RS13980	0.64	+0.7
3,001,968	+		DZA65_RS13980	0.64	+0.8
3,001,968	+		DZA65_RS13980	0.64	+2.0
3,001,968	+		DZA65_RS13980	0.64	-1.8
3,001,969	-		DZA65_RS13980	0.64	+2.0
3,001,969	-		DZA65_RS13980	0.64	-0.5
3,001,969	-		DZA65_RS13980	0.64	+1.1
3,001,971	+		DZA65_RS13980	0.65	+0.8
3,001,971	+		DZA65_RS13980	0.65	+1.8
3,001,971	+		DZA65_RS13980	0.65	+0.0
3,001,971	+		DZA65_RS13980	0.65	+1.0
3,001,972	-		DZA65_RS13980	0.65	+2.3
3,001,972	-		DZA65_RS13980	0.65	+1.1
3,001,972	-		DZA65_RS13980	0.65	+0.9
3,001,972	-		DZA65_RS13980	0.65	-0.2
3,001,972	-		DZA65_RS13980	0.65	-2.2
3,002,027	+		DZA65_RS13980	0.73	+0.2
3,002,027	+		DZA65_RS13980	0.73	+0.7
3,002,027	+		DZA65_RS13980	0.73	+0.8
3,002,027	+		DZA65_RS13980	0.73	-2.9
3,002,027	+		DZA65_RS13980	0.73	+0.6
3,002,027	+		DZA65_RS13980	0.73	-1.4
3,002,027	+		DZA65_RS13980	0.73	-0.1
3,002,028	-		DZA65_RS13980	0.73	+0.2
3,002,028	-		DZA65_RS13980	0.73	+1.2
3,002,028	-		DZA65_RS13980	0.73	+0.9
3,002,028	-		DZA65_RS13980	0.73	-0.2
3,002,028	-		DZA65_RS13980	0.73	-0.8
3,002,028	-		DZA65_RS13980	0.73	-0.3
3,002,028	-		DZA65_RS13980	0.73	+1.3
3,002,028	-		DZA65_RS13980	0.73	-0.4
3,002,028	-		DZA65_RS13980	0.73	+0.7
3,002,028	-		DZA65_RS13980	0.73	+0.3
3,002,028	-		DZA65_RS13980	0.73	-2.9
3,002,028	-		DZA65_RS13980	0.73	+0.4
3,002,070	+		DZA65_RS13980	0.79	+0.2
3,002,077	+		DZA65_RS13980	0.79	+0.1
3,002,078	-		DZA65_RS13980	0.80	+1.2
3,002,131	+		DZA65_RS13980	0.87	+0.9
3,002,131	+		DZA65_RS13980	0.87	+1.0
3,002,131	+		DZA65_RS13980	0.87	-0.0
3,002,131	+		DZA65_RS13980	0.87	+0.7
3,002,131	+		DZA65_RS13980	0.87	+0.6
3,002,131	+		DZA65_RS13980	0.87	+0.4
3,002,131	+		DZA65_RS13980	0.87	+0.2
3,002,132	-		DZA65_RS13980	0.87	+0.9
3,002,132	-		DZA65_RS13980	0.87	+0.6
3,002,132	-		DZA65_RS13980	0.87	+1.3
3,002,132	-		DZA65_RS13980	0.87	-0.2
3,002,132	-		DZA65_RS13980	0.87	+0.5
3,002,132	-		DZA65_RS13980	0.87	-0.6
3,002,132	-		DZA65_RS13980	0.87	+0.6
3,002,132	-		DZA65_RS13980	0.87	+1.4
3,002,132	-		DZA65_RS13980	0.87	+1.6
3,002,132	-		DZA65_RS13980	0.87	+0.5
3,002,132	-		DZA65_RS13980	0.87	+0.3
3,002,132	-		DZA65_RS13980	0.87	+1.6
3,002,133	+		DZA65_RS13980	0.87	+0.6
3,002,133	+		DZA65_RS13980	0.87	+1.0
3,002,133	+		DZA65_RS13980	0.87	+0.2
3,002,133	+		DZA65_RS13980	0.87	+0.8
3,002,133	+		DZA65_RS13980	0.87	-0.1
3,002,134	-		DZA65_RS13980	0.87	+0.2
3,002,134	-		DZA65_RS13980	0.87	-0.2
3,002,134	-		DZA65_RS13980	0.87	-0.2
3,002,134	-		DZA65_RS13980	0.87	+0.3
3,002,134	-		DZA65_RS13980	0.87	+1.0
3,002,134	-		DZA65_RS13980	0.87	-0.9
3,002,134	-		DZA65_RS13980	0.87	+1.0
3,002,134	-		DZA65_RS13980	0.87	+0.0
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3,002,134	-		DZA65_RS13980	0.87	-1.8
3,002,134	-		DZA65_RS13980	0.87	+0.2
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