Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13960

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,995,423	+		DZA65_RS13950	0.86	+0.6
2,995,424	-		DZA65_RS13950	0.87	+0.8
2,995,424	-		DZA65_RS13950	0.87	+1.4
2,995,424	-		DZA65_RS13950	0.87	+0.4
2,995,457	+				+0.1
2,995,458	-				+0.4
2,995,461	+				+0.2
2,995,461	+				-0.3
2,995,461	+				-0.4
2,995,461	+				-0.7
2,995,461	+				-0.3
2,995,461	+				+0.2
2,995,461	+				+0.7
2,995,461	+				-0.4
2,995,462	-				+0.2
2,995,462	-				+0.7
2,995,462	-				+0.2
2,995,462	-				+0.3
2,995,462	-				-0.0
2,995,462	-				+0.4
2,995,462	-				-0.1
2,995,462	-				+0.2
2,995,462	-				+0.4
2,995,462	-				-1.9
2,995,462	-				+1.2
2,995,462	-				+1.1
2,995,462	-				+0.5
2,995,462	-				+0.9
2,995,462	-				+0.8
2,995,462	-				+1.7
2,995,462	-				-0.4
2,995,462	-				+0.6
2,995,462	-				+0.8
2,995,476	+				+0.5
2,995,477	-				+0.7
2,995,539	+				+0.2
2,995,539	+				+0.7
2,995,539	+				+1.1
2,995,540	-				+0.5
2,995,540	-				+0.2
2,995,542	+		DZA65_RS13955	0.10	+0.9
2,995,542	+		DZA65_RS13955	0.10	+1.2
2,995,542	+		DZA65_RS13955	0.10	+0.6
2,995,542	+		DZA65_RS13955	0.10	+0.6
2,995,542	+		DZA65_RS13955	0.10	+1.4
2,995,542	+		DZA65_RS13955	0.10	+0.7
2,995,542	+		DZA65_RS13955	0.10	+0.4
2,995,542	+		DZA65_RS13955	0.10	+0.8
2,995,543	-		DZA65_RS13955	0.10	-0.6
2,995,543	-		DZA65_RS13955	0.10	+0.2
2,995,543	-		DZA65_RS13955	0.10	+0.4
2,995,543	-		DZA65_RS13955	0.10	+1.9
2,995,545	+		DZA65_RS13955	0.11	+0.7
2,995,572	+		DZA65_RS13955	0.14	+0.5
2,995,573	-		DZA65_RS13955	0.14	+0.6
2,995,573	-		DZA65_RS13955	0.14	-0.9
2,995,615	-		DZA65_RS13955	0.20	+1.0
2,995,700	+		DZA65_RS13955	0.30	+0.2
2,995,700	+		DZA65_RS13955	0.30	+0.5
2,995,700	+		DZA65_RS13955	0.30	+1.6
2,995,700	+		DZA65_RS13955	0.30	-1.1
2,995,700	+		DZA65_RS13955	0.30	+0.4
2,995,700	+		DZA65_RS13955	0.30	-0.3
2,995,700	+		DZA65_RS13955	0.30	+0.5
2,995,700	+		DZA65_RS13955	0.30	+0.7
2,995,700	+		DZA65_RS13955	0.30	+0.7
2,995,700	+		DZA65_RS13955	0.30	+0.3
2,995,700	+		DZA65_RS13955	0.30	+0.2
2,995,701	-		DZA65_RS13955	0.31	+0.2
2,995,701	-		DZA65_RS13955	0.31	+1.0
2,995,701	-		DZA65_RS13955	0.31	+1.2
2,995,701	-		DZA65_RS13955	0.31	-0.5
2,995,701	-		DZA65_RS13955	0.31	-0.7
2,995,701	-		DZA65_RS13955	0.31	+1.7
2,995,701	-		DZA65_RS13955	0.31	-0.1
2,995,701	-		DZA65_RS13955	0.31	-0.3
2,995,701	-		DZA65_RS13955	0.31	+0.6
2,995,706	+		DZA65_RS13955	0.31	+0.4
2,995,706	+		DZA65_RS13955	0.31	-1.0
2,995,706	+		DZA65_RS13955	0.31	+0.7
2,995,706	+		DZA65_RS13955	0.31	+1.2
2,995,706	+		DZA65_RS13955	0.31	+1.1
2,995,706	+		DZA65_RS13955	0.31	-0.1
2,995,706	+		DZA65_RS13955	0.31	+0.8
2,995,706	+		DZA65_RS13955	0.31	-0.8
2,995,706	+		DZA65_RS13955	0.31	-0.1
2,995,706	+		DZA65_RS13955	0.31	-0.6
2,995,707	-		DZA65_RS13955	0.31	+0.7
2,995,707	-		DZA65_RS13955	0.31	+2.1
2,995,707	-		DZA65_RS13955	0.31	+0.5
2,995,707	-		DZA65_RS13955	0.31	-0.4
2,995,707	-		DZA65_RS13955	0.31	+0.5
2,995,707	-		DZA65_RS13955	0.31	+1.5
2,995,707	-		DZA65_RS13955	0.31	+0.9
2,995,707	-		DZA65_RS13955	0.31	+0.6
2,995,707	-		DZA65_RS13955	0.31	-0.8
2,995,707	-		DZA65_RS13955	0.31	+0.9
2,995,707	-		DZA65_RS13955	0.31	-0.6
2,995,707	-		DZA65_RS13955	0.31	+0.6
2,995,707	-		DZA65_RS13955	0.31	+0.8
2,995,795	-		DZA65_RS13955	0.43	+0.5
2,995,824	+		DZA65_RS13955	0.46	+0.2
2,995,825	-		DZA65_RS13955	0.46	+1.0
2,995,825	-		DZA65_RS13955	0.46	+2.2
2,995,825	-		DZA65_RS13955	0.46	-0.9
2,995,879	-		DZA65_RS13955	0.53	+0.7
2,995,879	-		DZA65_RS13955	0.53	+1.7
2,995,879	-		DZA65_RS13955	0.53	+1.1
2,995,892	+		DZA65_RS13955	0.55	-0.4
2,995,892	+		DZA65_RS13955	0.55	-0.8
2,995,892	+		DZA65_RS13955	0.55	+1.3
2,995,892	+		DZA65_RS13955	0.55	+1.2
2,995,892	+		DZA65_RS13955	0.55	-0.1
2,995,892	+		DZA65_RS13955	0.55	+1.2
2,995,892	+		DZA65_RS13955	0.55	+1.3
2,995,892	+		DZA65_RS13955	0.55	+0.2
2,995,892	+		DZA65_RS13955	0.55	+0.4
2,995,892	+		DZA65_RS13955	0.55	-0.6
2,995,893	-		DZA65_RS13955	0.55	-0.2
2,995,893	-		DZA65_RS13955	0.55	+1.5
2,995,893	-		DZA65_RS13955	0.55	+0.8
2,995,893	-		DZA65_RS13955	0.55	+1.2
2,995,893	-		DZA65_RS13955	0.55	-0.4
2,995,901	+		DZA65_RS13955	0.56	-0.1
2,995,901	+		DZA65_RS13955	0.56	-0.1
2,995,902	-		DZA65_RS13955	0.56	+0.8
2,995,951	-		DZA65_RS13955	0.62	+0.1
2,995,951	-		DZA65_RS13955	0.62	+0.4
2,995,964	+		DZA65_RS13955	0.64	+0.2
2,995,964	+		DZA65_RS13955	0.64	+0.7
2,995,964	+		DZA65_RS13955	0.64	+0.8
2,995,964	+		DZA65_RS13955	0.64	+1.4
2,995,964	+		DZA65_RS13955	0.64	+2.2
2,995,964	+		DZA65_RS13955	0.64	+0.7
2,995,964	+		DZA65_RS13955	0.64	+0.1
2,995,964	+		DZA65_RS13955	0.64	+0.0
2,995,965	-		DZA65_RS13955	0.64	+2.8
2,995,965	-		DZA65_RS13955	0.64	-0.2
2,995,965	-		DZA65_RS13955	0.64	-0.1
2,995,965	-		DZA65_RS13955	0.64	-0.4
2,995,968	+		DZA65_RS13955	0.65	+0.5
2,995,968	+		DZA65_RS13955	0.65	-1.1
2,995,968	+		DZA65_RS13955	0.65	-0.3
2,995,968	+		DZA65_RS13955	0.65	+0.6
2,995,968	+		DZA65_RS13955	0.65	+0.3
2,995,968	+		DZA65_RS13955	0.65	+0.2
2,995,968	+		DZA65_RS13955	0.65	+2.1
2,995,968	+		DZA65_RS13955	0.65	+1.3
2,995,969	-		DZA65_RS13955	0.65	-0.8
2,995,969	-		DZA65_RS13955	0.65	+1.9
2,995,969	-		DZA65_RS13955	0.65	-0.4
2,995,969	-		DZA65_RS13955	0.65	+1.6
2,995,969	-		DZA65_RS13955	0.65	+0.4
2,995,969	-		DZA65_RS13955	0.65	+0.8
2,995,969	-		DZA65_RS13955	0.65	+1.2
2,995,969	-		DZA65_RS13955	0.65	+0.6
2,995,969	-		DZA65_RS13955	0.65	+0.7
2,996,040	-		DZA65_RS13955	0.74	+0.3
2,996,070	-		DZA65_RS13955	0.78	+0.3
2,996,070	-		DZA65_RS13955	0.78	+1.0
2,996,070	-		DZA65_RS13955	0.78	+1.5
2,996,070	-		DZA65_RS13955	0.78	+0.7
2,996,072	+		DZA65_RS13955	0.78	-0.2
2,996,072	+		DZA65_RS13955	0.78	-0.1
2,996,073	-		DZA65_RS13955	0.78	+0.4
2,996,073	-		DZA65_RS13955	0.78	+0.5
2,996,073	-		DZA65_RS13955	0.78	+0.9
2,996,142	+		DZA65_RS13955	0.87	-1.6
2,996,142	+		DZA65_RS13955	0.87	+0.5
2,996,143	-		DZA65_RS13955	0.87	+1.3
2,996,143	-		DZA65_RS13955	0.87	+0.2
2,996,143	-		DZA65_RS13955	0.87	+1.6
2,996,143	-		DZA65_RS13955	0.87	+0.6
2,996,143	-		DZA65_RS13955	0.87	-0.3
2,996,143	-		DZA65_RS13955	0.87	-0.2
2,996,143	-		DZA65_RS13955	0.87	+0.7
2,996,143	-		DZA65_RS13955	0.87	+1.0
2,996,156	+		DZA65_RS13955	0.89	-0.6
2,996,157	-		DZA65_RS13955	0.89	+0.2
2,996,157	-		DZA65_RS13955	0.89	+0.4
2,996,176	+				+0.9
2,996,189	+				+1.2
2,996,190	-				+0.4
2,996,222	+				-0.8
2,996,251	+				+0.2
2,996,251	+				-0.8
2,996,252	-				+1.8
2,996,252	-				+0.2
2,996,252	-				+0.2
2,996,277	+				+0.4
2,996,278	-				-0.2
2,996,278	-				-0.1
2,996,278	-				+0.5
2,996,324	-				+1.0
2,996,324	-				+0.8
2,996,351	-				-0.2
2,996,376	+				-0.8
2,996,377	-				+0.1
2,996,387	+				+0.2
2,996,421	+				-0.7
2,996,422	-				-1.8
2,996,425	+				-0.8
2,996,426	-				+1.0
2,996,428	+				-1.6
2,996,455	+				+0.4
2,996,461	+				+0.3
2,996,461	+				+0.7
2,996,462	-				-0.4
2,996,472	+				+1.6
2,996,472	+				-0.4
2,996,472	+				+0.2
2,996,472	+				+0.0
2,996,473	-				+2.1
2,996,473	-				+0.8
2,996,473	-				-0.1
2,996,473	-				+0.5
2,996,473	-				-1.2
2,996,473	-				+0.2
2,996,473	-				+0.6
2,996,505	+				+1.8
2,996,505	+				-1.0
2,996,505	+				+1.4
2,996,505	+				+0.6
2,996,505	+				+1.0
2,996,505	+				-0.3
2,996,506	-				+0.3
2,996,506	-				+0.2
2,996,506	-				-2.4
2,996,506	-				+0.1
2,996,527	+		DZA65_RS13960	0.12	-0.4
2,996,527	+		DZA65_RS13960	0.12	+0.6
2,996,581	+		DZA65_RS13960	0.17	-2.4
2,996,582	-		DZA65_RS13960	0.17	-0.4
2,996,651	-		DZA65_RS13960	0.25	-0.2
2,996,651	-		DZA65_RS13960	0.25	+1.0
2,996,684	-		DZA65_RS13960	0.28	+0.8
2,996,711	-		DZA65_RS13960	0.31	+1.0
2,996,711	-		DZA65_RS13960	0.31	+0.6
2,996,804	-		DZA65_RS13960	0.41	-2.4
2,996,804	-		DZA65_RS13960	0.41	-2.1
2,996,807	+		DZA65_RS13960	0.42	+0.1
2,996,807	+		DZA65_RS13960	0.42	-0.8
2,996,808	-		DZA65_RS13960	0.42	+0.1
2,996,808	-		DZA65_RS13960	0.42	+0.3
2,996,808	-		DZA65_RS13960	0.42	+1.2
2,996,886	+		DZA65_RS13960	0.50	-0.8
2,996,886	+		DZA65_RS13960	0.50	+0.6
2,996,886	+		DZA65_RS13960	0.50	-2.1
2,996,886	+		DZA65_RS13960	0.50	-0.0
2,996,886	+		DZA65_RS13960	0.50	-0.1
2,996,886	+		DZA65_RS13960	0.50	+0.3
2,996,886	+		DZA65_RS13960	0.50	-1.4
2,996,886	+		DZA65_RS13960	0.50	-1.8
2,996,887	-		DZA65_RS13960	0.50	+0.5
2,996,887	-		DZA65_RS13960	0.50	+0.6
2,996,887	-		DZA65_RS13960	0.50	-0.2
2,996,887	-		DZA65_RS13960	0.50	-0.3
2,996,887	-		DZA65_RS13960	0.50	+0.1
2,996,887	-		DZA65_RS13960	0.50	+1.0
2,996,887	-		DZA65_RS13960	0.50	+0.9
2,996,887	-		DZA65_RS13960	0.50	+0.8
2,996,887	-		DZA65_RS13960	0.50	+0.5
2,996,887	-				+2.3
2,996,887	-		DZA65_RS13960	0.50	+1.1
2,996,891	+		DZA65_RS13960	0.51	+0.7
2,996,891	+		DZA65_RS13960	0.51	+1.4
2,996,892	-		DZA65_RS13960	0.51	+0.4
2,996,911	+		DZA65_RS13960	0.53	+0.8
2,996,912	-		DZA65_RS13960	0.53	-2.1
2,996,912	-		DZA65_RS13960	0.53	-2.4
2,996,912	-		DZA65_RS13960	0.53	+0.7
2,996,915	-		DZA65_RS13960	0.53	-0.1
2,996,915	-		DZA65_RS13960	0.53	-0.0
2,996,915	-		DZA65_RS13960	0.53	+0.5
2,997,025	+				+0.6
2,997,026	-		DZA65_RS13960	0.65	-3.1
2,997,041	-		DZA65_RS13960	0.67	-0.8
2,997,053	-		DZA65_RS13960	0.68	+0.3
2,997,065	+		DZA65_RS13960	0.69	-1.0
2,997,065	+		DZA65_RS13960	0.69	+0.6
2,997,066	-		DZA65_RS13960	0.69	+0.2
2,997,066	-		DZA65_RS13960	0.69	+0.5
2,997,066	-		DZA65_RS13960	0.69	-0.2
2,997,066	-		DZA65_RS13960	0.69	-0.2
2,997,076	+		DZA65_RS13960	0.71	+0.8
2,997,077	-		DZA65_RS13960	0.71	+0.2
2,997,102	-		DZA65_RS13960	0.73	+3.0
2,997,127	+		DZA65_RS13960	0.76	+0.4
2,997,128	-		DZA65_RS13960	0.76	+0.2
2,997,128	-		DZA65_RS13960	0.76	+0.2
2,997,128	-		DZA65_RS13960	0.76	-0.2
2,997,134	-		DZA65_RS13960	0.77	-0.1
2,997,152	-		DZA65_RS13960	0.79	-0.2
2,997,163	+		DZA65_RS13960	0.80	+0.8
2,997,163	+		DZA65_RS13960	0.80	+0.5
2,997,164	-		DZA65_RS13960	0.80	+1.8
2,997,164	-		DZA65_RS13960	0.80	+1.5
2,997,164	-		DZA65_RS13960	0.80	+0.9
2,997,164	-		DZA65_RS13960	0.80	-0.4
2,997,164	-		DZA65_RS13960	0.80	+0.4
2,997,164	-		DZA65_RS13960	0.80	+0.6
2,997,164	-		DZA65_RS13960	0.80	+0.7
2,997,164	-		DZA65_RS13960	0.80	-0.6
2,997,164	-		DZA65_RS13960	0.80	+0.6
2,997,164	-		DZA65_RS13960	0.80	-0.4
2,997,164	-		DZA65_RS13960	0.80	-0.6
2,997,165	+		DZA65_RS13960	0.80	-0.2
2,997,165	+		DZA65_RS13960	0.80	+0.1
2,997,165	+		DZA65_RS13960	0.80	-0.5
2,997,166	-		DZA65_RS13960	0.80	+0.6
2,997,166	-		DZA65_RS13960	0.80	-0.0
2,997,166	-		DZA65_RS13960	0.80	+0.6
2,997,250	+		DZA65_RS13960	0.89	+0.0
2,997,250	+		DZA65_RS13960	0.89	-1.6
2,997,250	+		DZA65_RS13960	0.89	+0.4
2,997,251	-		DZA65_RS13960	0.89	-0.1
2,997,254	-		DZA65_RS13960	0.90	+0.5
2,997,254	-		DZA65_RS13960	0.90	-1.4
2,997,291	-				+1.5
2,997,313	+				-0.5
2,997,313	+				+0.1
2,997,313	+				+1.0
2,997,314	-				+0.4
2,997,314	-				-0.1
2,997,314	-				+0.8
2,997,331	+				+1.0
2,997,332	-				+2.0
2,997,332	-				-0.5
2,997,337	+				+1.2
2,997,349	+				+0.1
2,997,354	+				-0.7
2,997,362	-				-0.5
2,997,370	-				-0.2
2,997,383	+				+0.3
2,997,383	+				-0.0
2,997,433	+				+0.1
2,997,434	-				+1.2
2,997,452	+				+0.7
2,997,452	+				+0.5
2,997,452	+				-0.4
2,997,452	+				+0.9
2,997,452	+				+1.6
2,997,452	+				+0.8
2,997,452	+				+1.0
2,997,452	+				+0.6
2,997,452	+				-0.4
2,997,452	+				+1.1
2,997,453	-				+0.2
2,997,453	-				+1.0
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2,997,453	-				+1.4
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2,997,453	-				+1.2
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2,998,253	+		DZA65_RS13965	0.45	+1.1
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2,998,282	-		DZA65_RS13965	0.47	-1.4