Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,935,497	-				+0.1
2,935,500	+				+0.6
2,935,500	+				+0.7
2,935,500	+				+0.4
2,935,500	+				-2.4
2,935,500	+				-0.4
2,935,501	-				-0.2
2,935,501	-				+0.9
2,935,501	-				-0.5
2,935,505	+				-0.3
2,935,505	+				-0.9
2,935,506	-				+0.4
2,935,506	-				+0.0
2,935,517	+				-0.8
2,935,517	+				+0.2
2,935,523	+				-0.5
2,935,523	+				-0.9
2,935,523	+				+0.2
2,935,524	-				+1.1
2,935,524	-				-0.6
2,935,524	-				-0.2
2,935,535	-				-0.3
2,935,582	+				-0.2
2,935,583	-		DZA65_RS13685	0.10	+0.1
2,935,701	+		DZA65_RS13685	0.30	+0.2
2,935,790	-		DZA65_RS13685	0.45	-1.1
2,935,831	-		DZA65_RS13685	0.52	-1.8
2,935,831	-		DZA65_RS13685	0.52	+0.6
2,935,883	-		DZA65_RS13685	0.61	+1.0
2,935,899	+		DZA65_RS13685	0.64	-0.5
2,935,900	-		DZA65_RS13685	0.64	-1.1
2,935,900	-		DZA65_RS13685	0.64	+0.7
2,935,935	+		DZA65_RS13685	0.70	-2.1
2,935,935	+		DZA65_RS13685	0.70	-1.2
2,935,935	+		DZA65_RS13685	0.70	-0.5
2,935,936	-		DZA65_RS13685	0.70	-0.8
2,935,936	-		DZA65_RS13685	0.70	-0.8
2,935,936	-		DZA65_RS13685	0.70	-0.1
2,935,936	-		DZA65_RS13685	0.70	-2.0
2,935,936	-		DZA65_RS13685	0.70	-0.1
2,935,936	-		DZA65_RS13685	0.70	-0.1
2,935,936	-		DZA65_RS13685	0.70	+0.3
2,935,977	-		DZA65_RS13685	0.77	-1.5
2,935,977	-		DZA65_RS13685	0.77	+0.7
2,935,997	+		DZA65_RS13685	0.81	+0.1
2,935,997	+		DZA65_RS13685	0.81	-1.8
2,935,997	+		DZA65_RS13685	0.81	+0.9
2,935,997	+				+0.8
2,935,997	+		DZA65_RS13685	0.81	-0.8
2,935,998	-		DZA65_RS13685	0.81	+0.3
2,935,998	-		DZA65_RS13685	0.81	+0.0
2,935,998	-		DZA65_RS13685	0.81	+0.6
2,935,998	-		DZA65_RS13685	0.81	-0.2
2,935,998	-		DZA65_RS13685	0.81	+2.2
2,936,057	+				+0.2
2,936,057	+				-1.1
2,936,057	+				+0.4
2,936,057	+				-0.0
2,936,058	-				-1.4
2,936,058	-				+0.7
2,936,058	-				-1.0
2,936,058	-				+0.8
2,936,058	-				+0.5
2,936,058	-				+0.2
2,936,072	-				+0.4
2,936,101	+				-0.2
2,936,102	-				-0.6
2,936,121	+				-0.4
2,936,121	+				+0.3
2,936,121	+				+0.1
2,936,122	-				+0.4
2,936,122	-				+0.9
2,936,122	-				-0.6
2,936,122	-				-1.2
2,936,132	+				+0.4
2,936,133	-				-0.7
2,936,161	+				-2.1
2,936,162	-				+0.6
2,936,184	+				-3.0
2,936,184	+				+1.0
2,936,184	+				-1.0
2,936,185	-				+2.2
2,936,185	-				-1.0
2,936,185	-				-1.5
2,936,185	-				+0.1
2,936,266	+				-0.6
2,936,307	-		DZA65_RS13690	0.13	-0.3
2,936,391	+		DZA65_RS13690	0.22	-0.2
2,936,391	+		DZA65_RS13690	0.22	+1.4
2,936,474	+		DZA65_RS13690	0.30	-0.3
2,936,475	-		DZA65_RS13690	0.31	-0.8
2,936,479	+		DZA65_RS13690	0.31	-1.8
2,936,480	-		DZA65_RS13690	0.31	+0.7
2,936,480	-		DZA65_RS13690	0.31	+0.3
2,936,509	+		DZA65_RS13690	0.34	-0.8
2,936,509	+		DZA65_RS13690	0.34	-0.8
2,936,510	-		DZA65_RS13690	0.34	-0.8
2,936,510	-		DZA65_RS13690	0.34	+0.1
2,936,512	+		DZA65_RS13690	0.34	+0.2
2,936,524	+		DZA65_RS13690	0.36	-0.4
2,936,524	+		DZA65_RS13690	0.36	+1.8
2,936,524	+		DZA65_RS13690	0.36	-0.8
2,936,524	+		DZA65_RS13690	0.36	-2.0
2,936,525	-		DZA65_RS13690	0.36	+0.9
2,936,525	-				+1.2
2,936,525	-		DZA65_RS13690	0.36	-0.4
2,936,614	-		DZA65_RS13690	0.45	-0.2
2,936,614	-		DZA65_RS13690	0.45	-0.2
2,936,614	-		DZA65_RS13690	0.45	+1.3
2,936,614	-		DZA65_RS13690	0.45	-0.4
2,936,782	+		DZA65_RS13690	0.63	-0.4
2,936,783	-		DZA65_RS13690	0.63	-1.1
2,936,783	-		DZA65_RS13690	0.63	-1.8
2,936,839	-		DZA65_RS13690	0.69	-0.3
2,936,839	-		DZA65_RS13690	0.69	-0.4
2,936,850	+		DZA65_RS13690	0.70	-2.0
2,936,851	-		DZA65_RS13690	0.70	+0.2
2,936,851	-		DZA65_RS13690	0.70	-1.7
2,936,967	+		DZA65_RS13690	0.82	+0.5
2,936,968	-		DZA65_RS13690	0.82	-2.4
2,936,968	-		DZA65_RS13690	0.82	-0.6
2,937,024	+		DZA65_RS13690	0.88	-2.6
2,937,024	+		DZA65_RS13690	0.88	-0.3
2,937,025	-		DZA65_RS13690	0.88	+1.4
2,937,025	-		DZA65_RS13690	0.88	-0.5
2,937,025	-		DZA65_RS13690	0.88	-0.5
2,937,031	+		DZA65_RS13690	0.89	-0.8
2,937,116	+				-1.1
2,937,116	+				-0.4
2,937,117	-				+0.7
2,937,152	+				-0.2
2,937,152	+				-1.4
2,937,153	-				-0.8
2,937,156	+				-0.1
2,937,156	+				-0.6
2,937,157	-				+0.2
2,937,157	-				+0.2
2,937,187	+				-0.0
2,937,193	+				-0.1
2,937,193	+				+0.2
2,937,210	+				-0.6
2,937,211	-				-0.6
2,937,211	-				+0.4
2,937,218	+				+0.5
2,937,218	+				-0.8
2,937,287	+				+0.2
2,937,287	+				+0.2
2,937,288	-				-0.3
2,937,296	+				+1.7
2,937,296	+				+0.7
2,937,296	+				+0.9
2,937,297	-				+2.0
2,937,342	+				-1.4
2,937,419	+				-1.1
2,937,443	+				+0.1
2,937,515	+				-0.6
2,937,539	+				+0.2
2,937,539	+				+0.2
2,937,550	+				-0.3
2,937,565	+				-0.4