Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,918,470	+		DZA65_RS13585	0.32	-0.6
2,918,470	+		DZA65_RS13585	0.32	-0.5
2,918,471	-		DZA65_RS13585	0.32	-0.5
2,918,479	-		DZA65_RS13585	0.33	+0.6
2,918,515	+		DZA65_RS13585	0.37	-1.1
2,918,517	+		DZA65_RS13585	0.37	-0.9
2,918,517	+		DZA65_RS13585	0.37	+0.5
2,918,517	+		DZA65_RS13585	0.37	+0.9
2,918,517	+		DZA65_RS13585	0.37	-1.2
2,918,517	+		DZA65_RS13585	0.37	+0.8
2,918,518	-		DZA65_RS13585	0.37	+1.1
2,918,518	-		DZA65_RS13585	0.37	-0.3
2,918,716	+		DZA65_RS13585	0.56	+2.5
2,918,717	-		DZA65_RS13585	0.56	+0.9
2,918,729	+		DZA65_RS13585	0.58	+0.4
2,918,834	-		DZA65_RS13585	0.68	+0.6
2,919,062	-				+0.5
2,919,067	+				-0.5
2,919,112	+				+1.0
2,919,146	+				+0.6
2,919,146	+				-1.0
2,919,146	+				+0.5
2,919,146	+				-0.5
2,919,146	+				+0.0
2,919,146	+				-1.3
2,919,147	-				+0.4
2,919,147	-				+0.6
2,919,147	-				+1.5
2,919,147	-				+0.5
2,919,147	-				+0.3
2,919,147	-				+0.1
2,919,178	+				+1.4
2,919,178	+				+0.3
2,919,178	+				-1.1
2,919,178	+				-0.5
2,919,178	+				-1.4
2,919,222	+				-0.2
2,919,222	+				-0.4
2,919,223	-				-0.6
2,919,223	-				-0.9
2,919,223	-				-0.6
2,919,223	-				-2.3
2,919,239	+				-1.4
2,919,239	+				-0.5
2,919,240	-				+1.6
2,919,240	-				+0.1
2,919,240	-				-0.4
2,919,240	-				-0.7
2,919,240	-				+0.9
2,919,240	-				-0.4
2,919,240	-				+0.6
2,919,256	+				-0.2
2,919,256	+				-0.8
2,919,256	+				-1.4
2,919,256	+				-0.2
2,919,256	+				-0.6
2,919,256	+				+1.8
2,919,257	-				-1.5
2,919,257	-				-0.5
2,919,257	-				-1.0
2,919,257	-				-0.5
2,919,313	+				+0.1
2,919,313	+				-0.6
2,919,313	+				-0.8
2,919,313	+				-0.8
2,919,314	-				+1.2
2,919,314	-				-0.1
2,919,316	+				+2.5
2,919,316	+				-1.2
2,919,317	-				+0.4
2,919,407	+				+1.6
2,919,408	-				-1.2
2,919,462	-		DZA65_RS13590	0.12	+1.2
2,919,473	+		DZA65_RS13590	0.13	-0.0
2,919,536	+		DZA65_RS13590	0.21	+0.4
2,919,537	-		DZA65_RS13590	0.21	+0.9
2,919,537	-		DZA65_RS13590	0.21	-0.2
2,919,789	+		DZA65_RS13590	0.50	+0.5
2,919,789	+		DZA65_RS13590	0.50	+0.0
2,919,790	-		DZA65_RS13590	0.50	-0.0
2,919,790	-		DZA65_RS13590	0.50	+0.2
2,920,138	+				-2.4
2,920,138	+				+1.3
2,920,138	+				-1.5
2,920,138	+				+0.6
2,920,138	+				-1.1
2,920,142	+				-0.5
2,920,217	-				+1.2
2,920,308	+		DZA65_RS13595	0.18	-0.1
2,920,309	-		DZA65_RS13595	0.19	-1.4
2,920,310	+		DZA65_RS13595	0.19	-0.8
2,920,311	-		DZA65_RS13595	0.19	-0.3
2,920,317	+		DZA65_RS13595	0.20	+1.1
2,920,435	+		DZA65_RS13595	0.40	+0.0
2,920,435	+		DZA65_RS13595	0.40	-2.4
2,920,435	+		DZA65_RS13595	0.40	-2.8
2,920,435	+		DZA65_RS13595	0.40	-1.6
2,920,465	-		DZA65_RS13595	0.45	+0.7
2,920,505	-		DZA65_RS13595	0.52	+0.2
2,920,505	-		DZA65_RS13595	0.52	-0.5
2,920,510	+		DZA65_RS13595	0.52	-0.5
2,920,516	+		DZA65_RS13595	0.53	+1.6
2,920,782	+				+0.2
2,920,827	+				+2.2
2,920,827	+				-1.2
2,920,828	-				-0.3
2,920,950	+		DZA65_RS13600	0.35	-0.8
2,920,950	+		DZA65_RS13600	0.35	-0.0
2,920,951	-		DZA65_RS13600	0.36	-0.3
2,920,956	+		DZA65_RS13600	0.37	-0.3
2,920,957	-		DZA65_RS13600	0.37	+1.0
2,920,993	+		DZA65_RS13600	0.47	-0.6
2,920,993	+		DZA65_RS13600	0.47	-0.8
2,920,993	+		DZA65_RS13600	0.47	-1.1
2,920,993	+		DZA65_RS13600	0.47	+0.6
2,920,994	-		DZA65_RS13600	0.47	-1.0
2,920,994	-		DZA65_RS13600	0.47	+0.4
2,920,994	-		DZA65_RS13600	0.47	+0.3
2,920,994	-		DZA65_RS13600	0.47	+1.4
2,920,994	-		DZA65_RS13600	0.47	+3.0
2,920,994	-		DZA65_RS13600	0.47	+0.2
2,920,994	-		DZA65_RS13600	0.47	-0.9
2,921,111	-		DZA65_RS13600	0.77	-0.5
2,921,111	-		DZA65_RS13600	0.77	-1.0
2,921,153	-		DZA65_RS13600	0.88	-0.2
2,921,153	-		DZA65_RS13600	0.88	+0.0
2,921,153	-		DZA65_RS13600	0.88	-0.8
2,921,153	-		DZA65_RS13600	0.88	-2.2