Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13120

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,812,408	+		DZA65_RS13110	0.38	+0.6
2,812,408	+		DZA65_RS13110	0.38	+0.1
2,812,632	+				-0.2
2,812,632	+				+0.6
2,812,633	-				+0.0
2,812,636	+				+1.0
2,812,655	+				+0.2
2,812,655	+				+1.1
2,812,732	+				+0.9
2,812,732	+				-0.0
2,812,733	-				+0.0
2,812,734	+				+1.4
2,812,734	+				+0.9
2,812,735	-				+0.8
2,812,769	-				+0.6
2,812,809	+				+0.5
2,812,809	+				-0.5
2,812,819	+				+0.2
2,812,828	-				-1.0
2,812,835	-				-0.8
2,812,835	-				-0.8
2,812,843	-				+0.4
2,812,877	+		DZA65_RS13115	0.14	-0.4
2,812,878	-		DZA65_RS13115	0.14	-0.2
2,812,887	+		DZA65_RS13115	0.16	-0.5
2,812,887	+		DZA65_RS13115	0.16	-0.6
2,812,928	+		DZA65_RS13115	0.26	+0.4
2,812,929	-		DZA65_RS13115	0.27	+1.3
2,812,934	+		DZA65_RS13115	0.28	-1.1
2,812,935	-		DZA65_RS13115	0.28	+0.4
2,812,935	-		DZA65_RS13115	0.28	+0.2
2,812,935	-		DZA65_RS13115	0.28	+1.7
2,812,935	-		DZA65_RS13115	0.28	+0.5
2,812,955	+		DZA65_RS13115	0.33	+1.3
2,812,994	+		DZA65_RS13115	0.43	-1.4
2,812,994	+		DZA65_RS13115	0.43	+2.0
2,813,015	+		DZA65_RS13115	0.48	-0.2
2,813,015	+		DZA65_RS13115	0.48	-1.2
2,813,015	+		DZA65_RS13115	0.48	+0.6
2,813,015	+				+1.5
2,813,016	-		DZA65_RS13115	0.48	+1.0
2,813,016	-		DZA65_RS13115	0.48	-0.7
2,813,016	-		DZA65_RS13115	0.48	-0.1
2,813,016	-		DZA65_RS13115	0.48	-0.4
2,813,064	+		DZA65_RS13115	0.60	-0.2
2,813,064	+		DZA65_RS13115	0.60	-1.1
2,813,065	-		DZA65_RS13115	0.60	-0.4
2,813,065	-		DZA65_RS13115	0.60	+0.2
2,813,065	-		DZA65_RS13115	0.60	+0.2
2,813,065	-		DZA65_RS13115	0.60	-1.0
2,813,065	-		DZA65_RS13115	0.60	+0.1
2,813,065	-		DZA65_RS13115	0.60	+0.2
2,813,084	-		DZA65_RS13115	0.65	+0.8
2,813,108	-		DZA65_RS13115	0.71	+0.7
2,813,372	+				-0.8
2,813,372	+				-0.6
2,813,409	+				+0.9
2,813,409	+				-2.6
2,813,562	-		DZA65_RS13120	0.30	+0.0
2,813,634	+		DZA65_RS13120	0.40	-1.7
2,813,718	-		DZA65_RS13120	0.52	-0.5
2,813,910	+		DZA65_RS13120	0.80	-2.1
2,813,910	+		DZA65_RS13120	0.80	-2.3
2,813,911	-		DZA65_RS13120	0.80	-0.8
2,813,911	-		DZA65_RS13120	0.80	-1.4
2,813,911	-		DZA65_RS13120	0.80	-2.8
2,814,043	-				+0.4
2,814,043	-				+0.3
2,814,043	-				-0.3
2,814,043	-				+0.0
2,814,074	+				+0.2
2,814,075	-				+0.8
2,814,085	-				+1.1
2,814,102	+				-0.2
2,814,142	+				+1.2
2,814,155	+				-1.1
2,814,156	-				+0.5
2,814,230	+		DZA65_RS13125	0.22	-2.3
2,814,230	+		DZA65_RS13125	0.22	-1.8
2,814,231	-		DZA65_RS13125	0.22	-1.5
2,814,308	+		DZA65_RS13125	0.44	+0.1
2,814,349	-		DZA65_RS13125	0.56	+0.2
2,814,349	-		DZA65_RS13125	0.56	-0.8
2,814,443	+		DZA65_RS13125	0.82	+1.2
2,814,443	+		DZA65_RS13125	0.82	+0.5
2,814,444	-		DZA65_RS13125	0.83	-1.1
2,814,444	-		DZA65_RS13125	0.83	-1.4
2,814,444	-		DZA65_RS13125	0.83	-0.8
2,814,444	-		DZA65_RS13125	0.83	+0.8
2,814,508	-				-1.4
2,814,508	-				+0.8
2,814,598	-				+0.4
2,814,602	+				+0.6
2,814,603	-				+0.0
2,814,603	-				+0.5
2,814,631	+				-1.8
2,814,696	-				+0.2
2,814,696	-				-0.3
2,814,700	-				-1.4
2,814,700	-				-0.1
2,814,716	+				+0.5
2,814,719	+				+0.1
2,814,744	-				-0.6
2,814,744	-				-0.5
2,814,744	-				-1.0
2,814,790	-				+0.1
2,814,833	-				+0.1
2,814,847	+				-0.1
2,814,847	+				-1.8
2,814,848	-				-1.8
2,814,848	-				-0.1
2,814,901	+				-1.1
2,814,902	-				-0.5
2,814,910	+				-0.1
2,814,955	+		DZA65_RS13130	0.12	+1.7
2,814,961	+		DZA65_RS13130	0.13	+0.0
2,814,962	-		DZA65_RS13130	0.13	+0.8