Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,792,568	+		DZA65_RS13015	0.64	-0.8
2,792,568	+		DZA65_RS13015	0.64	-0.8
2,792,568	+		DZA65_RS13015	0.64	+0.2
2,792,569	-		DZA65_RS13015	0.64	-0.1
2,792,569	-		DZA65_RS13015	0.64	-0.4
2,792,569	-		DZA65_RS13015	0.64	+0.1
2,792,569	-		DZA65_RS13015	0.64	+0.9
2,792,569	-		DZA65_RS13015	0.64	-0.2
2,792,569	-		DZA65_RS13015	0.64	+1.8
2,792,676	+		DZA65_RS13015	0.79	-0.1
2,792,676	+		DZA65_RS13015	0.79	-0.6
2,792,677	-		DZA65_RS13015	0.80	-0.6
2,792,695	+		DZA65_RS13015	0.82	+1.8
2,792,695	+		DZA65_RS13015	0.82	-1.1
2,792,840	+				-0.5
2,792,840	+				+0.0
2,792,841	-				-0.4
2,792,845	+				+0.6
2,792,846	-				+0.8
2,792,846	-				-0.4
2,792,846	-				-0.1
2,792,873	+				-1.4
2,792,969	-				-3.0
2,792,970	+				-0.7
2,792,970	+				-1.4
2,792,971	-				+0.4
2,792,971	-				+0.7
2,792,971	-				+0.4
2,792,974	+				-0.3
2,792,975	-				-0.3
2,793,042	+				+0.7
2,793,043	-				-0.1
2,793,043	-				+1.5
2,793,043	-				-0.5
2,793,044	+				+0.2
2,793,044	+				+0.4
2,793,045	-				+0.1
2,793,045	-				-0.5
2,793,045	-				-0.5
2,793,086	+				-0.5
2,793,086	+				-0.0
2,793,110	+				+0.9
2,793,110	+				-0.2
2,793,110	+				+0.4
2,793,129	+				+0.6
2,793,129	+				-0.0
2,793,129	+				-0.2
2,793,129	+				+0.2
2,793,129	+				-1.9
2,793,130	-				-1.7
2,793,146	+				-0.8
2,793,146	+				+0.1
2,793,146	+				-0.2
2,793,164	-				-1.0
2,793,206	+		DZA65_RS13020	0.18	+0.6
2,793,214	+		DZA65_RS13020	0.21	-0.4
2,793,215	-		DZA65_RS13020	0.22	+0.2
2,793,260	+		DZA65_RS13020	0.43	+1.4
2,793,261	-		DZA65_RS13020	0.43	+1.2
2,793,261	-		DZA65_RS13020	0.43	-1.3
2,793,263	+		DZA65_RS13020	0.44	-0.8
2,793,263	+		DZA65_RS13020	0.44	-0.7
2,793,264	-		DZA65_RS13020	0.44	+0.2
2,793,381	+				-0.2
2,793,382	-				-1.0
2,793,382	-				-0.2
2,793,419	+				+1.0
2,793,470	+				+0.4
2,793,471	-				+0.1
2,793,471	-				+0.2
2,793,506	+				+0.2
2,793,733	+		DZA65_RS13025	0.70	+0.2
2,793,733	+		DZA65_RS13025	0.70	-1.3
2,793,734	-		DZA65_RS13025	0.70	-2.1
2,793,803	+				-0.0
2,793,803	+				+0.5
2,793,803	+				-1.3
2,793,803	+				-0.1
2,793,803	+				-0.5
2,793,804	-				+0.2
2,793,804	-				-0.5
2,793,804	-				-0.3
2,793,916	+		DZA65_RS13030	0.11	+0.9
2,793,916	+		DZA65_RS13030	0.11	-0.5
2,793,916	+		DZA65_RS13030	0.11	+1.2
2,793,916	+		DZA65_RS13030	0.11	-0.8
2,793,916	+		DZA65_RS13030	0.11	+0.2
2,793,916	+		DZA65_RS13030	0.11	-0.1
2,793,916	+		DZA65_RS13030	0.11	+0.2
2,793,916	+		DZA65_RS13030	0.11	-0.8
2,793,917	-		DZA65_RS13030	0.11	+0.9
2,793,917	-		DZA65_RS13030	0.11	-0.7
2,793,917	-		DZA65_RS13030	0.11	+0.8
2,793,917	-		DZA65_RS13030	0.11	-0.1
2,793,917	-		DZA65_RS13030	0.11	-0.2
2,793,917	-		DZA65_RS13030	0.11	+0.2
2,793,917	-		DZA65_RS13030	0.11	-1.0
2,793,917	-		DZA65_RS13030	0.11	+1.1
2,793,917	-		DZA65_RS13030	0.11	+0.7
2,793,917	-		DZA65_RS13030	0.11	-1.4
2,793,953	+		DZA65_RS13030	0.16	-0.2
2,793,954	-		DZA65_RS13030	0.16	+0.2
2,793,954	-		DZA65_RS13030	0.16	+0.2
2,793,954	-		DZA65_RS13030	0.16	-0.5
2,793,954	-		DZA65_RS13030	0.16	-0.6
2,793,954	-		DZA65_RS13030	0.16	+0.3
2,793,954	-		DZA65_RS13030	0.16	+0.2
2,793,956	+		DZA65_RS13030	0.16	-0.8
2,793,956	+		DZA65_RS13030	0.16	+1.2
2,793,957	-		DZA65_RS13030	0.17	-0.5
2,794,170	-		DZA65_RS13030	0.45	+0.2
2,794,272	+		DZA65_RS13030	0.58	+1.2
2,794,272	+		DZA65_RS13030	0.58	+0.1
2,794,272	+		DZA65_RS13030	0.58	-1.1
2,794,272	+		DZA65_RS13030	0.58	+1.0
2,794,273	-		DZA65_RS13030	0.58	+1.1
2,794,273	-		DZA65_RS13030	0.58	-0.9
2,794,411	-		DZA65_RS13030	0.76	-0.4
2,794,411	-		DZA65_RS13030	0.76	+0.1
2,794,460	+		DZA65_RS13030	0.83	+0.3
2,794,460	+		DZA65_RS13030	0.83	-0.1
2,794,460	+		DZA65_RS13030	0.83	+1.7
2,794,461	-		DZA65_RS13030	0.83	+0.4
2,794,461	-		DZA65_RS13030	0.83	-1.1
2,794,461	-		DZA65_RS13030	0.83	+0.2
2,794,461	-		DZA65_RS13030	0.83	-0.8
2,794,498	+		DZA65_RS13030	0.88	-0.7
2,794,514	+				+1.5
2,794,514	+				-1.0
2,794,514	+				-2.1
2,794,515	-				+0.4
2,794,569	+				-0.5
2,794,570	-				-1.1
2,794,570	-				-0.3
2,794,584	-				-0.5
2,794,598	+				-0.8
2,794,598	+				-1.3
2,794,637	+				+0.1
2,794,638	-				+1.2
2,794,703	-				-0.2
2,794,743	+				-0.7
2,794,744	-				+0.6
2,794,744	-				-0.5
2,794,744	-				-1.0
2,794,744	-				-0.5
2,794,744	-				-0.9