Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11915

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,543,814	-		DZA65_RS11905	0.77	+0.1
2,544,018	+		DZA65_RS11905	0.86	+0.3
2,544,018	+		DZA65_RS11905	0.86	+1.1
2,544,019	-		DZA65_RS11905	0.86	+0.9
2,544,041	+		DZA65_RS11905	0.87	-2.4
2,544,041	+		DZA65_RS11905	0.87	-0.5
2,544,042	-		DZA65_RS11905	0.87	+1.0
2,544,111	-		DZA65_RS11905	0.90	+0.1
2,544,111	-		DZA65_RS11905	0.90	-1.3
2,544,111	-		DZA65_RS11905	0.90	-1.2
2,544,111	-		DZA65_RS11905	0.90	-0.9
2,544,164	+				-1.6
2,544,190	+				-0.7
2,544,190	+				+0.6
2,544,191	-				+0.2
2,544,213	-				+1.1
2,544,331	+				-0.0
2,544,332	-				+0.6
2,544,342	+				+0.8
2,544,343	-				-0.2
2,544,348	+				-1.0
2,544,359	+				+1.3
2,544,360	-				+2.5
2,544,372	+				+1.1
2,544,373	-				+1.1
2,544,650	+				+1.6
2,544,664	+				-0.3
2,544,664	+				+0.1
2,544,679	-				+0.3
2,544,693	+				-0.1
2,544,693	+				-1.2
2,544,694	-				+0.6
2,544,709	-				-0.7
2,544,738	+				-0.1
2,544,738	+				-0.5
2,544,738	+				-1.4
2,544,738	+				+0.1
2,544,739	-				+0.7
2,544,739	-				-0.3
2,544,739	-				-0.2
2,544,739	-				-1.1
2,544,739	-				-1.1
2,544,739	-				+0.4
2,544,759	+				-0.7
2,544,759	+				-1.9
2,544,759	+				-1.1
2,544,869	+		DZA65_RS11915	0.46	+2.4
2,544,870	-		DZA65_RS11915	0.47	-1.4
2,544,958	+		DZA65_RS11915	0.83	+0.3
2,544,959	-		DZA65_RS11915	0.84	+1.0
2,544,997	+				-2.1
2,545,065	+				+0.5
2,545,065	+				+0.1
2,545,066	-				+0.4
2,545,066	-				+0.7
2,545,084	+				-0.1
2,545,085	-				-0.7
2,545,155	-				-0.1
2,545,155	-				-0.1
2,545,169	+				+0.5
2,545,169	+				+0.5
2,545,170	-				-1.1
2,545,170	-				+1.0
2,545,228	+				-0.3
2,545,228	+				-0.0
2,545,228	+				+0.5
2,545,228	+				+0.3
2,545,228	+				-0.3
2,545,228	+				+0.4
2,545,228	+				+0.8
2,545,229	-				+0.4
2,545,229	-				+0.1
2,545,229	-				+0.1
2,545,229	-				+0.6
2,545,282	-				+0.1
2,545,316	-				-0.2
2,545,322	+				-0.4
2,545,322	+				+1.1
2,545,323	-				-0.0
2,545,323	-				+0.5
2,545,328	-				+1.1
2,545,352	+		DZA65_RS11920	0.12	+0.3
2,545,352	+		DZA65_RS11920	0.12	+1.0
2,545,352	+		DZA65_RS11920	0.12	+0.8
2,545,353	-		DZA65_RS11920	0.13	+1.3
2,545,353	-		DZA65_RS11920	0.13	-3.2
2,545,353	-		DZA65_RS11920	0.13	-1.7
2,545,353	-		DZA65_RS11920	0.13	-1.4
2,545,353	-		DZA65_RS11920	0.13	+0.1
2,545,353	-		DZA65_RS11920	0.13	-1.7
2,545,369	-		DZA65_RS11920	0.18	-0.3
2,545,396	+		DZA65_RS11920	0.27	-1.9
2,545,396	+		DZA65_RS11920	0.27	-0.3
2,545,396	+		DZA65_RS11920	0.27	-0.3
2,545,396	+		DZA65_RS11920	0.27	+0.5
2,545,396	+		DZA65_RS11920	0.27	-0.3
2,545,397	-		DZA65_RS11920	0.27	+0.4
2,545,397	-		DZA65_RS11920	0.27	+0.7
2,545,397	-		DZA65_RS11920	0.27	-1.4
2,545,684	+		DZA65_RS11925	0.24	-0.7
2,545,707	+		DZA65_RS11925	0.32	+0.3
2,545,727	+		DZA65_RS11925	0.39	+0.3
2,545,877	+				-0.6
2,545,938	+				+0.4